ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9932071 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◢ SRX017710: CD4+ T cells

◢ SRX5090184: GM12878

◢ SRX10475642: Hep G2

◢ SRX10475643: Hep G2

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◢ SRX9932062: MCF-7

◢ SRX9932063: MCF-7

◢ SRX9932064: MCF-7

◢ SRX9932065: MCF-7

◢ SRX9932066: MCF-7

◢ SRX9932067: MCF-7

◢ SRX9932068: MCF-7

◢ SRX9932069: MCF-7

◢ SRX9932070: MCF-7

◣ SRX9932071: MCF-7

◢ SRX9932072: MCF-7

◢ SRX9932073: MCF-7

◢ SRX9932074: MCF-7

◢ SRX9932075: MCF-7

◢ SRX9932076: MCF-7

◢ SRX9932077: MCF-7

◢ SRX23330419: MDA-MB-231

◢ SRX23330420: MDA-MB-231

◢ SRX23330421: MDA-MB-231

◢ SRX23330422: MDA-MB-231

◢ SRX23330424: MDA-MB-231

◢ SRX23330425: MDA-MB-231

◢ HDAC6: STRING

GREB1
CASP7
PDZK1
RARA
FKBP4
VASN
MYOG
ADAMTSL5
PARD6B
N4BP3
KCNK6
FREM2
LMAN1L
RPS6KL1
RAPGEFL1
TH
RNF223
FOXK1
DGKZ
SNX24
SYT12
HAAO
C1QTNF1
CHPT1
AKAP1
CYP1B1
CCDC88C
NFKBIA
TFF1
TPD52L1
CTBP1
OVOL2
EDF1
SGK3
C19orf33
MAP3K14
NAB2
FAM102A
PDGFA
SFXN2
ARL3
MCF2L
LY6E
MANEAL
SLC25A24
AMZ1
TIPARP
CABLES2
USP31
CST6
GPRIN1
NBPF1
OLFML3
KDM4B
C1QTNF6
ZNF185
B3GNT6
ITPK1
CXXC5
LRRFIP2
APOA1
TTC39A
MYB
UPF1
CAP2
CTAG2
PKP3
MIDEAS
LRRC56
HRAS
CLIC3
PTPA
CRAT
RECQL4
LRRC14
RAB40C
HAPLN2
KEAP1
LAMC1
TMEM229B
PLEKHH1
UNKL
SPTBN4
BLVRB
SCOC
KIAA0319
DOK7
ESR1
SLC25A45
VPS26C
MSMB
CRKL
SLC9A3R2
KRT85
SLC25A42
AFF1
PAK4
ARMCX6
PRUNE1
MINDY1
ELF1
LYPD6B
PLIN5
LRG1
ZBTB37
FRG2C
ADAM8
CELSR2
IPPK
RPS28
NDUFA7
TCIRG1
STK11
GRM4
SEPTIN9
ACSS1
ZBTB46
RGS10
ADGRG1
B4GALT1
ANXA9
UHRF1
ZFP36
PLEKHG2
ACIN1
FST
CDK3
SGCA
KIF21A
TJAP1
CHSY1
CUEDC1
TIFA
SBNO2
TPD52L2
ABHD16B
ZBTB45
DMRT2
FMN1
FBP1
LTBP1
VWA2
MFSD10
SLC25A36
CCN5
UMODL1
TBX2
AKNA
PSD4
FUT4
RGL3
PNKD
MAD1L1
SNAI1
SPATS2L
GPSM1
PDE4DIP
TMEM92
TFAP2C
TP53I3
MRGPRG
CBFA2T3
DUX4
MICOS10-NBL1
MICOS10
PDE4C
SPOP
FBXW8
ELAPOR1
C1orf194
FOXK2
CLASP2
ARHGEF16
ABAT
ZFYVE28
CFAP99
SULT2B1
GRIK3
ABCC11
SLC25A19
MACC1
DSN1
CDC34
LRP5L
DNMT3A
TUBA3E
SVIL
C1orf162
ARHGEF18
CDC42EP1
RERG
CDR2L
DECR1
PLXNB1
SYNE3
CBWD5
CBWD3
CBWD6
TST
MPST
DMPK
RCOR3
PRDX1
EFHD2
NIPSNAP2
FRG2
ZNF346
OBSL1
INHA
TTC6
FOXA1
FOXO6
ANKRD2
B3GALNT1
TRH
CCR6
VEPH1
SERPINA6
MYLK2
RASEF
MGAT3
PRSS27
PGLYRP2
NPEPPS
ASB2
GFAP
TSKU
CASTOR1
RNPEPL1
ANKMY1
DNPEP
EDN1
REM2
SLC26A1
IDUA
C20orf203
OXT
MYZAP
GCOM1
SERPINA1
DDX10
BMP7
DHRS3
HSPB8
HDAC11
NR2F6
SEMA3B
LRRC58
PXDC1
FAM214A
NDRG1
IL2RB
EXT2
FABP3
SLC25A47
NPIPB9
INS
PPP2R2C
PABPC1
RNF144A
PMEPA1
CBWD2
SDC1
TUBA1A
MTRNR2L1
C9orf139
ABCA2
ATXN1
ZBTB7B
DHX37
BRI3BP
FRMD5
UGT2B15
ATP6AP2
SH2D3C
DLG4
ACADVL
RHOD
TUBA3D
TTC39C
IL24
ARID5B
NEFH
OAZ3
MRPL9
ZNF746
YPEL2
EHF
TSEN54
CASKIN2
VCAN
AP1B1
GZF1
NTMT1
C9orf50
LATS1
UBALD1
S100P
IMPA2
PERP
DOT1L
USF2
PI4KB
IKBKG
G6PD
SCAMP4
ADAT3
TMEM210
LRRC26
AGR3
FGFBP2
CIB2
FECH
COX7A2L
TAX1BP1
PTH1R
VWA1
AHCYL1
SLC37A3
GPC6
TMEM95
KCTD11
CYP4F11
ZMYND11
SLC29A1
KAT6B
WNT16
SYT8
SLC22A5
ZNF710
CALML5
SLC6A6
ERN1
MTA1
SH3GLB2
STMN3
RTEL1
GAA
SLC1A5
ZBTB5
RORC
TBXA2R
TMEM120A
TMED8
SAMD15
CFAP206
ZNF91
ROBO3
MIPOL1
RALGPS2
TM7SF2
CLCN4
PTGES
UBE2I
EPPK1
GPR153
ITPRIPL1
ARHGEF10L
LASP1
NFE2L1
FSIP1
TJP3
SPATC1L
MTRNR2L2
MSH3
DHFR
MTRNR2L8
COLEC12
ACACB
COL23A1
SP2
TLE1
CCNP
NT5DC3
LIMS1
NRP1
SVEP1
TBKBP1
NXNL2
MAT1A
RGPD2
RGPD1
ADARB1
TFAP2A
SPAAR
CYP4F2
SCGB3A1
MAGI3
LONRF2
WDR74
CRYAA2
CRYAA
POLR3F
DZANK1
SCARB1
EIF5AL1
PCYT1A
SHANK2
EPN1
GTPBP6
MTRNR2L10
EMILIN2
MAMDC2
ADORA1
USP17L20
IER5L
DNM2
MTRNR2L9
LFNG
LIMS4
LIMS3
TMEM212
HK1
NR2F2
USP17L22
IL20
CCDC200
LEMD2
GRAMD1A
TXNRD1
SPRY4
HSPA4
RFX1
RPS6KA2
LOC102723996
ICOSLG
TDRD9
ELFN2
SLC45A4
DHRS2
CNOT3
CDH18
NLK
CLDN2
AMBP
HNRNPL
BAMBI
RCAN1
TNS1
RNF170
OSBP
HOOK3
JPH2
ELOVL2
C3
FOXN1
MTRNR2L6
MARCHF10
RHOBTB1
EVI5L
NAIP
APOC3
ZBTB7A
UBL4A
SLC10A3
ABCB8
RGS3
UBE2H
CALHM4
DLC1
ME3
FADD
KRT13
BCL3
TOM1L2
DRC3
SNX10
HSFX3
EOLA1
HSPB1
PRSS22
HOMER2
PRDM4
ARFGEF2
FNIP2
ANXA2
KLRF2
EHD1
CIC
PDLIM2
GATAD2A
MAPKAPK5
ITGB2
SSTR2
USP17L11
RBM43
ZNF687
PLCD3
ACBD4
ZNF552
TWF2
MEF2A
PPP2R5E
PABPN1
TSPAN5
USP17L18
SHCBP1L
FAM234B
ASPG
USP17L21
USP17L12
JARID2
TRPM7
SLC37A1
RABL6
OPRL1
LKAAEAR1
ABCD3
NBPF12
FARSB
PCIF1
PAX9
FBH1
ANKRD16
TPBG
CRK
ZNFX1
POLDIP3
KAZN
ZSWIM6
ARHGAP29
TMEM107
ZNF385B
PTP4A2
SIRT4
AMOTL2
CDH11
BHLHE40
PTMA
ENTPD8
USP17L15
STC2
SETD2
LGR6
PALLD
LENG1
PAQR5
B3GNT3
ABCA3
HUWE1
H3C15
H3C14
H2AC19
H2AC18
PADI3
EXOSC5
BCKDHA
MTUS1
FUS
RAI14
SLC19A1
GLRX5
RBBP5
SPATA9
RHOBTB3
PDCD6IP
NUP85
ANKHD1-EIF4EBP3
ANKHD1
TKTL2
MIDN
NPIPB6
H4C15
H4C14
PAX4
KLF10
DNMBP
SH3YL1
ACP1
MICAL3
KHSRP
UNC5B
H4C12
H4C11
SLC25A25
H2BC5
H1-4
BATF
RPS29
GJD3
PKIB
ADD3
TTC21B
ANAPC7
SRSF7
CYB561
ESRP2
SLC16A3
LHX4
C1orf198
HOGA1
ANGEL1
KRT36
MEIS1
UFM1
TCF21
HSP90AB1
CACNA1H
INAVA
MAB21L4
ITGB3
KLRC3
TNK2
TRAF7
SASH3
MED12L
LAMB2
GPD1L
B2M
DYSF
MOCS1
HSFX4
ENKUR
SEC14L5
ADAMTS16
AZGP1
ATP5MG
SH3BGR
LCA5L
GOSR2
C19orf48
SART3
ISCU
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
PNO1
MRPS7
GGA3
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12F
GAGE12B
SMAD3
ACBD6
NAIF1
NVL
GTF2B
HRK
ZNF576
IRGQ
FBN1
CSK
ZRANB2
ZNF335
SF3B3
COG4
RAB5B
ADCY9
PMF1-BGLAP
PMF1
IRF2BPL
EEF1A1
MYH11
TSN
RAB31
UBE2L3
TRIM2
KCNK7
PSMD12
PCNX3
MAP3K11
RPEL1
TOMM40
AKT1
ZFP37
PRSS8
PHF13
PKM
H4C3
H1-6
DDIT4
SBSPON
SEMA4G
ID1
DLL3
DCLK1
CASZ1
ZNF654
FAM187A
EFTUD2
CGGBP1
CCDC103
RPS27
RAB13
EIF3E
BLCAP
PCTP
SULT1A1
KCTD1
SLC11A2
RABL2B
GHRH
GADD45B
IVD
PPP2R3A
KRT24
CGN
SKP1
RP1
SP1
SLC25A6
C20orf204
IL17RB
CHDH
UPF2
STAM
APPL2
BCKDK
SLC27A2
NR0B2
LARP1
CACTIN
SLC7A2
TLE3
SUN5
BPIFB2
TRAF2
TANGO6
FBXO34
PROP1
MRPS18B
H2AX
SRSF2
MFSD11
TOB1
ZNF823
MBD6
DDIT3
SCD
ZBTB4
SLC35G6
POLR2A
C4orf19
HSPA9
H2BC21
H2AC21
H2AC20
FAM53C
CDC25C
NDRG2
FIBCD1
ARHGEF40
FGF18
SOCS3
RUNDC3B
H2BC12
H2AC12
NME6
WDR97
MAF1
PHACTR2
CCDC187
PKD2L2
EIF1
NCOA7
SHANK1
CLEC11A
RPLP1
PUM2
RAD23A
HP1BP3
PROSER1
NHLRC3
NUP214
AHCY
ARRB1
WNT4
PDHX
APIP
FAM78B
ARRDC2
PLGRKT
JUND
BTG1
UQCRH
LRRC41
GAGE2C
GAGE2B
GAGE2A
CLPSL1
SRD5A1
RPL27
PTPRH
H1-7
RAB11B
SEC14L2
SESN1
RPS20
AP3M1
ADK
RABL2A
COL6A5
TBC1D10B
MYLPF
LOXL4
MT2A
P2RX2
SLC2A11
MACIR
CALM2
SBSN
GAPDHS
SEC61B
HSH2D
ALG2
FAM3C
ASXL1
AMD1
IPO13
SULT1A4
SULT1A3
BOLA2-SMG1P6
BOLA2
ADAMTS8
SLC35B1
GEMIN4
BASP1
RPLP0
NR2C1
MACROH2A1
NFKBIL1
EMP2
DDX39B
ATP6V1G2
OVOL1
H2BC11
H2AC11
MAT2A
CDH1
ACE
SEMA3F
COL18A1
RPS2
RNF151
CEBPD
BCAR3
ZC3H10
RPL41
LRIG2
LETM1
REXO1
CYP3A43
VIT
DCAF7
OR2T1
NME1-NME2
NME1
TMEM17
JUN
HADHB
HADHA
P2RX7
TMEM238
RPL28
ASGR2
UPK3A
POLR2J3
TBCK
AIMP1
PLXNB2
GFOD1
PTPRN2
EEF2
BCAT1
NUDT9
ERG
JAKMIP1
IQGAP2
EOMES
DDB2
STAM2
PHF3
TRIP10
SYNGR1
GPR108
TTC8
SLC46A3
LUC7L2
FMC1-LUC7L2
FMC1
POFUT1
PLAGL2
CSRNP1
NGB
JUNB
SIMC1
GSTA4
TIAF1
S100A10
METTL16
CCR7
KLHL14
USP17L19
TCF7L2
RPS6
FILIP1L
WIZ
HEXIM1
CCNO
H2BC8
H2AC8
STIP1
MLPH
ID2
CHMP5
BAG1
TSPOAP1
PCGF2
TRIM45
OXCT2
LPIN1
MVB12B
DENND1B
ZC2HC1C
TMEM60
PHTF2
OPRD1
BRD2
ACYP1
POLR3E
PIK3CD
NAT10
RNF149
RCC1
PRKACA
PMAIP1
NBPF15
ZCWPW1
TRIM16L
MEPCE
MS4A6E
GPAM
CAPN13
EIF4G2
DDX5
FBXO31
CHST11
SUPV3L1
MISP3
HNRNPH1
USP53
TJP1
GPR137
TOR1AIP2
SMC2
DTNB
RBM17
PES1
IMPDH2
AK2
VDAC2
RSRP1
RPS12
PLEC
PLAGL1
SH2D4B
IER3
FLOT1
EIF4A1
CIRBP
STRIP1
PPFIBP2
MAGOH
H4C2
H3C2
ATXN7
TUBB4B
TP53I11
MEI4
EIF4E3
ESYT2
PSMD1
STK40
PIP5K1B
FRAT2
COX5A
APTX
TMEM79
SMG5
RPL38
JAK1
ADPGK
RANBP2
CCNL1
BRAF
GNA12
KCNB2
TTI2
TRIM55
NFE2L2
MAP1B