ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX059712 | VCaP
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX16386913: 293

◢ SRX3010110: A549

◢ SRX3010111: A549

◢ SRX24188777: BJ

◢ SRX24188786: BJ

◢ SRX20550182: BT67

◢ SRX20550183: BT67

◢ SRX20550184: BT67

◢ SRX20599715: Caco-2

◢ SRX20599717: Caco-2

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX10616096: GM12878

◢ SRX10616097: GM12878

◢ SRX11374678: GM12878

◢ SRX11374679: GM12878

◢ SRX3322296: GM12878

◢ SRX3322297: GM12878

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX10478224: Hep G2

◢ SRX10478225: Hep G2

◢ SRX2423815: Hep G2

◢ SRX2423816: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX2023732: iPSC derived cardiac cells

◢ SRX2023764: iPSC derived cardiac cells

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX2423402: K-562

◢ SRX2423403: K-562

◢ SRX5457481: K-562

◢ SRX5457482: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX8064823: Lymphoblastoid cell line

◢ SRX8064824: Lymphoblastoid cell line

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX11399800: NCI-H1963

◢ SRX11399801: NCI-H1963

◢ SRX11399802: NCI-H1963

◢ SRX9779520: NCI-H1963

◢ SRX4732741: Pre-B cells

◢ SRX7981741: Prostate cancer

◢ SRX7981742: Prostate cancer

◢ SRX7981743: Prostate cancer

◢ SRX7981744: Prostate cancer

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX9562892: RH-4

◢ SRX9562897: RH-4

◢ SRX19212560: SK-N-MC

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◣ SRX059712: VCaP

◢ HDAC2: STRING

RAE1
CARS2
ZEB1
ANP32E
PMM1
SHC1
CKS1B
ATL3
FAM240C
TICRR
RNF187
NCAPH
OTUB1
NEIL3
AEN
RBM14-RBM4
RBM14
UNG
ALKBH2
TENT2
CAMTA1
DUX4
WDR61
C12orf66
PMS2
AIMP2
NPAS4
EIF1AD
BANF1
KIF20A
BRD8
RPS6KA4
TBRG4
IQGAP3
BLM
KAT5
MTFR2
TMEM40
GRM3
RUVBL1
EEFSEC
SCGB3A1
FANCI
TRAPPC6A
BLOC1S3
TMEM216
NGB
CENPM
PALM2AKAP2
DSCC1
SPINDOC
SVEP1
ZDHHC24
ACTN3
SLC12A9
MRM1
APBB2
CBR1
DPP3
RAD9A
MTRNR2L1
PC
FBXO5
LMAN2
PCNX3
MAP3K11
JPH3
MIS18A
URB1
TOMM40
SLC25A45
FRMD8
HDGFL2
WDR62
THAP8
SPCS1
GLT8D1
CCT2
MACROD1
RHNO1
FOXM1
COX8A
TAF9
RAD17
AK6
HIGD1C
ERG
GABRA2
MAP2K6
CEP55
ZBTB18
ZNF559-ZNF177
ZNF559
CENPS-CORT
CENPS
ZNF546
SSH3
KIF18B
PIGW
MYO19
DHX37
BRI3BP
SYT12
NDUFAF6
CCNE2
WDR4
PITPNM1
IMPA1
CXCL5
NUF2
PSME3
UBE2C
MON1A
DCAF4
SUMF1
SAC3D1
FBXL3
CDC20
DYRK1B
TSPAN33
TRMT112
PRDX5
SMYD1
PCDH7
DAZAP2
ZNF555
ARHGEF7
ZFPL1
CDCA5
TMEM262
MXD3
SCFD2
AURKB
RAB20
KNL1
CENPH
ULK4
TIMELESS
MAMDC2
STIP1
OIP5
NUSAP1
PRKDC
MCM4
STC1
NUDT2
KIF24
DIP2A
SLC24A4
ETF1
PELI3
NDUFV1
KLHL18
KIF9
GUF1
NOL6
EIF3H
GTF3C4
DDX31
SASS6
CALML5
ING1
SCUBE3
RFPL3
METTL1
EEF1AKMT3
CYP27B1
MRPS35
URB2
TAF5L
RCE1
NPTX2
KXD1
HDGF
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
POLR2J3
TTK
RPL23A
RAB34
PABPC1
TARS3
SUPT7L
SLC4A1AP
TXLNA
EBAG9
TM9SF4
RAB37
DDX21
H4C5
GRWD1
XPO5
POLH
NUDCD1
PIGU
COX18
SKIDA1
CKAP2L
RRS1
ADHFE1
MELK
VPS33A
CEP128
IMP3
MILR1
SART1
CSTF1
AURKA
SGO2
BRWD1
AIP
FAM174C
SLC29A2
TASOR
SNX16
ERCC1
MAX
PYCR3
PARPBP
NUP37
RAB3A
ARHGAP11A-SCG5
ARHGAP11A
IFNLR1
VEGFA
OVOL1
UTP20
CDK7
SLC25A51
MCM10
PYGO2
LOC101928120
FBXL13
ARMC10
ATXN2L
RTKN2
MCM7
AP4M1
ENDOV
DDX19B
ATAD5
VAT1
RND2
AARS1
PISD
CIT
ARSI
SGO1
ZBTB7B
NDUFAF2
ERCC8
UBE3B
DZIP3
CIP2A
PUM3
SLC16A8
HEXA
KIFC1
CYRIB
ARHGAP22
ZCCHC14
ARHGDIA
NEMP1
RCC1
CRNKL1
CFAP61
RNF145
NEK2
PMVK
DEPTOR
HGH1
NAXD
H4C3
H1-6
UNC13A
PPP1R15B
ZNF77
NFIC
EMC4
TMEM248
UBL7
TNK2
ASF1B
CREG1
DHX40
USP2
EDC3
DHODH
TRMT61A
COLGALT1
DUT
SMIM13
NOVA2
RAD51
HSPA9
PFDN5
MYG1
PCNA
KCTD7
FKBPL
ATF6B
NLE1
DNAJC11
NCAPG
MLH1
EPM2AIP1
LRFN4
MANSC1
LECT2
XRCC2
CPLX1
SUSD4
AATF
ASH2L
WDR46
PFDN6
FPGS
POC1A
DNAJC9
NME2
KIAA0319
NOP16
HIGD2A
CSNK1G1
SEC24B
ZNF628
POLR2J2
ZNF202
ELP1
ABITRAM
VPS8
THOC3
ZNF331
LSS
NBPF1
MRPL45
MOK
ADAR
NUP214
SMC2
ZNF200
FANCG
PBX3
NAA40
FAM222B
FANCD2
TIPARP
TTC31
RHEBL1
CCDC142
DERL1
AP3M2
MEIS2
USF2
RAD18
GPR137
ANAPC7
BAD
LGALS7B
MYO7B
CDC25A
SCIN
LZTR1
SLC25A26
SCAMP2
ACACA
TACR1
RITA1
DDX54
PGBD5
AKNA
TTLL12
PPY
UNC5A
CHSY1
BBS1
ARHGAP45
EIF3E
TMEM242
AAAS
TIAM2
FBXO48
APLF
MRPL10
LRRC46
EHD1
PRDM15
ZNF830
CCT6B
MRPS33
DIABLO
WIZ
NFKBID
HCST
NOP2
EXO1
RARG
IDH3A
POLR3H
RRM2
ZNF771
TMA16
TLK1
MTRNR2L8
SYNJ1
DHRS13
KAT6B
DOLPP1
LIX1L
POLA2
ALDH3B1
FLOT2
FAM124A
POLR3GL
ANKRD34A
UNC93B1
NEUROD2
ACSBG2
CEP135
KIF15
KIAA1143
GLI4
ZSWIM9
LIG1
ZFP62
SLC52A2
FBXL6
MNS1
TMEM249
PNO1
DCAKD
NMT1
CDKAL1
LRRC59
ATG9B
ABCB8
DECR1
ZNF530
TAOK1
MAPK12
SPATA25
NEURL2
CTSA
CFAP298-TCP10L
CFAP298
PLK4
RHBDF2
TRNT1
DECR2
NME4
TMEM117
MAPK10
BIRC5
MRM3
GLOD4
TOMM22
NOP53
AGPAT3
INTS8
ZNF483
SNRPD2
QPCTL
TEKT2
ADPRS
CCNB1
SHOX2
RSRC1
MRPL1
RPL6
PTPN11
ZSCAN2
SNRPF
CENPE
ANKRD10
NDUFS6
MRPL36
CCNA2
GTF2H3
EIF2B1
GTSE1
SMC4
IFT80
HSF1
BOP1
FAM189A1
PIWIL1
VTA1
NMBR
ATAD2
ING5
LACTB
TUBGCP5
KANSL1L
MX1
OS9
TIMM23
UQCC2
RAB40B
TIAM1
EIF2D
EXOSC3
DDX11
NOL8
CENPP
GET3
POLQ
WDR43
RYBP
MSX1
RGL3
ZNF581
CCDC106
FAM117B
TTC7A
MCFD2
IFRD2
IDUA
MMP28
FAM237B
UBFD1
EARS2
RTTN
RBP4
HAGH
FAHD1
NBN
PHF19
POLR1B
PAK4
CCDC15
SDAD1
ZNF2
TMED5
CCDC18
ST3GAL3
BAZ1B
KMT5B
SOD1
SUSD5
MYOG
ZIM2
PEG3
RRP12
SKA3
MRPL57
FARSB
E2F5
NUB1
PLAAT3
VSTM5
N6AMT1
RAD54L
TTC3
MYBL1
PIGP
SRPRB
GSTP1
QKI
PAXX
CLIC3
SMAD5
ANKRD13D
TRNP1
FAM219A
DNAI1
ZNF781
BDNF
IPO4
ZNF180
IKBIP
APAF1
SFSWAP
EIF4EBP1
BUB1
RPS6KB2
TUBA1C
SEMA4G
ENO1
TIMM22
PSMD14
ICE2
SNAPC5
TPBGL
TYW3
CRYZ
RWDD2B
KIAA0895
ANLN
ALAD
FZR1
TBC1D16
PIMREG
RRP9
PARP3
CCDC40
GDPGP1
CIB1
LAX1
PPP1R26
SETD1B
RRP15
MFAP3L
ZNF3
GMNN
SF3A1
CCDC157
RNASEH2C
SPTAN1
CDC42EP2
PDSS1
STK32A
RPA2
WFDC3
DNTTIP1
ARRB1
CYB5A
NOP14
GRK4
TOP1MT
ZNF667
CCZ1
OLIG1
RCOR2
PSMB7
ERAL1
HASPIN
STAU2
SLC5A8
GDAP1
MRPL39
CRIP1
TEDC1
FANCC
NUDT8
ARL2
PIK3IP1
MED30
TENT4B
CX3CL1
MAPKAPK3
D2HGDH
DPP9
SLF1
KIAA0825
CDK3
GRAMD1B
BACE2
CACNA1B
GATB
SEC31A
THAP9
SMYD5
ADAMTS14
CDC25C
MRPS22
CEP43
ASAP1
LOC100130520
CD300H
ITFG2
VARS1
ANKRD28
LRRC6
RAD54B
RNASEH2B
TRIM2
ZNF814
LSAMP
DUS1L
MRPS36
CPNE4
ATL1
TRAIP
DPH7
TMEM38A
SMIM7
MAP4K5
PTPN5
NTAQ1
NFIB
POLR1H
GGH
C20orf204
HYOU1
TIMM13
DOK7
UBE2G2
TRAPPC10
NAA25
HYAL2
RPS29
B4GAT1
BRMS1
CLSPN
BBS5
DDX49
COPE
DLGAP5
YIPF3
POLR1C
LRR1
SAPCD2
FSD2
E2F2
H2AX
WHAMM
ERICH5
ARMH4
AHCY
PPIL2
HNRNPH1
TRIP13
BRD9
RNF19A
MPC1
TYMSOS
TYMS
CHRNA5
TMEM98
UGT2B11
INTS7
DTL
E2F1
FOXP1
ATP5MF-PTCD1
ATP5MF
PEBP1
BLOC1S2
HMGA2
TRAF3IP2
OSCAR
NDUFA3
RBM28
CDK5RAP1
ESCO2
CENPF
CDC6
BUB1B
LTN1
ZNF383
THNSL1
SLC16A1
OTULIN
ARRDC2
ZDHHC14
FAM98C
ARHGAP32
PRND
TRABD
PLCG2
CFD
SOX11
PSMD9
HPD
CRBN
DCP1B
TMCC2
MYBL2
SQLE
FIGNL1
MMS22L
MGAT1
TRIM52
NUDT12
KLF10
ALDH3B2
CSGALNACT1
C16orf71
ANKS3
S100A13
CHTOP
RPF2
DHH
BPNT2
MUS81
CFL1
ESRRA
ZC3HC1
RPS27L
MRPL3
WDR81
POLD2
ZHX3
UBE2D1
HNRNPAB
MTRNR2L2
MSH3
DHFR
PCNT
C21orf58
TAF4B
AP1G1
CBX8
PDCD2L
GLIS2
SLC2A6
CNNM1
UTP25
EIF2B3
ZNRD2
FAM89B
NCLN
ZNF76
COX14
NSUN5
RRP1
CALM1
RIDA
POP1
CHCHD6
ZCCHC10
HEY1
PDIA4
RNASEH2A
PRDX2
POLE2
TSEN34
MBOAT7
KLHDC1
ZNF324B
TEX19
MYO1D
SYK
GRTP1
HTRA4
LHCGR
PYCR2
ARRDC4
SLC29A1
ICA1L
ZNHIT3
KLC2
TSPAN13
STEAP4
PRMT2
VGLL4
RNMT
FAM210A
HSPBP1
BRSK1
STIL
CTNS
SHPK
ATP5MG
C1orf54
APH1A
PRKACB
PHACTR2
MACROD2
TBC1D10C
PPP1CA
SLC1A1
AKT3
DDX52
SRGAP3
SMTNL2
SLC2A5
KCNK4
PSMC2
DNAJC2
FBXO22
DDX46
YWHAG
CAAP1
NGRN
ACBD7
CRABP1
WASHC5
NSMCE2
RANGAP1
SPIDR
HAT1
LIG4
ABHD13
C1orf159
PCYOX1
TMTC4
ZKSCAN1
CSRP3
SNRPE
ZNF473
VRK3
DPP8
RCL1
MRPL17
FLCN
NOP58
NEK6
TMX2
MED19
CAD
PDCD2
SPOUT1
NEK11
ASTE1
POLD1
NAAA
RYR3
ZASP
SAP25
IQCA1
CNTRL
C5
CCDC97
PKDCC
FLAD1
TADA2B
CCDC96
AKAP10
PTDSS1
MTERF3
DMAC1
LIN9
RAB11FIP4
FBXL20
CDYL
CGREF1
ANKRD29
ABHD1
FAM72C
EXOSC5
BCKDHA
DPF1
THG1L
SLC35A5
ATG3
ZNHIT2
GOSR2
MICAL3
SSH2
TTC37
ARSK
CFAP43
ZNF75A
TIGD7
ZNF571
ZNF540
DIXDC1
RTN3
FAU
EFCAB5
JAK1
SMG9
RUFY1
HNF4G
CACNA1D
POLM
GTF3C5
ASNS
LOC101928764
CLPB
H3C2
H4C2
DCPS
MTRR
FASTKD3
MRS2
H2AC4
DCK
MYO9B
HAUS8
GALR3
NEUROG3
NME1-NME2
NME1
SOD2
PGAM5
LTV1
SKA1
SPG21
RBKS
BABAM2
CNPY3
LYRM4
FARS2
DYNC1I2
TTC23L
BHLHE40
RPS12
SND1
CEP192
HNRNPF
PIP4K2C
MAT2A
AMN1
C7orf57
FAM160A1
SEMA4B
MAD2L2
KPNA2
WDR3
GDAP2
RRP1B
HSF2BP
LIN54
NIPSNAP3A
HINFP