ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX116424 | K-562
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX16386913: 293

◢ SRX3010110: A549

◢ SRX3010111: A549

◢ SRX24188777: BJ

◢ SRX24188786: BJ

◢ SRX20550182: BT67

◢ SRX20550183: BT67

◢ SRX20550184: BT67

◢ SRX20599715: Caco-2

◢ SRX20599717: Caco-2

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX10616096: GM12878

◢ SRX10616097: GM12878

◢ SRX11374678: GM12878

◢ SRX11374679: GM12878

◢ SRX3322296: GM12878

◢ SRX3322297: GM12878

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX10478224: Hep G2

◢ SRX10478225: Hep G2

◢ SRX2423815: Hep G2

◢ SRX2423816: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX2023732: iPSC derived cardiac cells

◢ SRX2023764: iPSC derived cardiac cells

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◣ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX2423402: K-562

◢ SRX2423403: K-562

◢ SRX5457481: K-562

◢ SRX5457482: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX8064823: Lymphoblastoid cell line

◢ SRX8064824: Lymphoblastoid cell line

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX11399800: NCI-H1963

◢ SRX11399801: NCI-H1963

◢ SRX11399802: NCI-H1963

◢ SRX9779520: NCI-H1963

◢ SRX4732741: Pre-B cells

◢ SRX7981741: Prostate cancer

◢ SRX7981742: Prostate cancer

◢ SRX7981743: Prostate cancer

◢ SRX7981744: Prostate cancer

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX9562892: RH-4

◢ SRX9562897: RH-4

◢ SRX19212560: SK-N-MC

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

NPAS4
MTRNR2L2
MSH3
DHFR
HTR5A
MTRNR2L8
XKR7
IQSEC3
LIN28A
EPN1
RTBDN
NKX1-1
HPCA
NUP214
TUBA1A
RBM48
PEX1
ZNF335
INSM2
FAM24A
MICAL3
TDRD7
MTRNR2L9
RFX1
CPLX2
EIF2D
SFSWAP
L1CAM
SUMF1
PYY
NAGS
MTRNR2L10
SYT11
GON4L
FRG2
EPHA10
PDE4A
NACAD
SMIM17
RGPD1
RGPD2
RIMBP3C
RIMBP3B
NCLN
RIMBP3
TOP3B
CYB5R4
DIO1
MTRNR2L1
ZCCHC7
CHGB
MACIR
UBE2L3
TIGAR
PIN1
RAB42
DLGAP3
CACNG3
NBPF1
P2RX6
MAPK8IP2
CKMT1A
OSCAR
NDUFA3
PPIP5K1
CKMT1B
CELSR3
MANEAL
NPPB
UTP20
MFSD4B
NAGPA
BARHL1
PRAME
CLVS1
NUCKS1
GPR158
SCG3
FAM72C
COL23A1
NEU1
PSMD9
HPD
UFD1
CDC45
SHFL
SNAP25
TJP3
SDC3
GET3
MTRNR2L6
KREMEN2
RTL10
GNB1L
PAQR4
GJD3
TTC9B
EMILIN2
PICK1
ADCYAP1
MEGF9
RBM19
USP30
SVOP
TMEM181
ANK1
CIZ1
SLC18A3
CHAT
FIBCD1
USP35
KCTD21
GNB4
SPATA2
FBXO5
UQCR11
MAPK1
TRAF1
ANKHD1-EIF4EBP3
ANKHD1
SCRT1
TPBGL
TTC38
PKDREJ
TOMM22
GTPBP6
DHX40
NEK6
KCNH7
VPS37D
TEKT2
ADPRS
GPR78
CEACAM16
CRKL
ATL3
AANAT
UBE2O
SLC6A6
PGBD5
PPFIA3
C19orf73
RAB37
ZCWPW1
MEPCE
VARS1
ACBD6
TRMT1
NACC1
KLHL18
KIF9
WASHC2C
C1QTNF8
KIF18B
CYRIB
GFOD1
COL6A5
GTF2H3
EIF2B1
MRPL40
HIRA
MICALL2
FEM1A
UTP11
TSR3
GNPTG
CASTOR2
TRIP13
BRD9
CDKN1A
FNBP1
DYSF
CHRM4
GBA
NBPF3
RRM2
PDE4C
C6orf136
DNAJC11
ADAMTS14
SST
TSPAN13
YPEL1
ESCO2
PCBP3
LHFPL4
IDH3B
METTL2B
IER5L
LPIN1
UBE3B
SRGAP2B
FAM72D
TSEN2
DUX4
CRBN
RAP1GAP
MAMDC2
RFC1
CREG1
ARHGAP28
HNRNPD
WASHC2A
CTPS1
ANKRD36C
RRP15
C12orf66
ODF2
TMEM121B
RASGRP2
NUP35
VPS37C
ESYT2
SGSM1
RABIF
DPF1
RPA2
SYMPK
FOXA3
INPP5B
DHX37
BRI3BP
C1orf109
CDCA8
IL1RL1
SRGAP2
FAM72A
SLC25A24
QTRT1
TMEM199
POLDIP2
CCDC92B
KCNK12
SPDYE14
SPDYE10P
COASY
SYNJ2
LCMT2
ADAL
SLC4A1
WSCD2
SOGA1
DNAJC6
CDC7
TCF19
CCHCR1
BRAF
NRCAM
EPC2
CBX8
S100A8
BOD1
TIMM10
TRAPPC2L
GALNS
SPDEF
C15orf39
IL12RB1
ZC3H15
PHC2
TRAIP
VPS50
HEPACAM2
GPATCH4
TAS1R1
NOL9
NAT10
PPIL2
CDK11B
EML2
COLGALT2
CRNKL1
CFAP61
PAFAH2
SMYD5
NOP16
HIGD2A
ACVR2A
CHST12
KTI12
MRPS26
GNRH2
PIK3CD
ITPR3
HSD17B8
RING1
ITGAV
EBI3
LRRFIP2
CSRNP1
ACE
ALX4
SLC12A9
GRPEL2
PUS7
PDLIM7
KCTD15
GATA1
SPNS1
ASNS
RSPH14
RAB36
GPATCH3
CRYAA2
CRYAA
C8orf33
RABEP2
ST6GAL1
NBPF15
AMER3
BUB1B
AP3B2
TSTD2
NCBP1
ZBTB32
CLK3
NOL6
CCDC116
DNA2
FABP6
IBA57
CBLL1
CMIP
OGDHL
LRP11
SCGN
CASZ1
AKT2
NTAN1
SRXN1
APOA1
SLC27A4
HEXA
LTV1
PGPEP1
DGAT2
R3HDM4
KISS1R
GATB
XPC
LSM3
TAP1
PSMB9
TADA1
FUT11
GRM1
DRD2
SNAP29
PI4KA
LOC388282
LYSMD2
DRG2
PMS2
AIMP2
RPP25
CD83
MARCHF11
AEN
ZFYVE26
RAD51B
GADD45B
COPS7B
PSME3
THAP7
OXNAD1
DPH3
KLHL21
TMEM191B
RCCD1
TARBP1
VTA1
NMBR
PRRT3
KAT6B
UBIAD1
ZFYVE1
SETD1A
IQGAP2
C20orf204
PNPLA6
CRH
FAM78A
PMF1-BGLAP
PMF1
DGCR8
CLN6
PYCR3
EXOSC2
SRRD
HPS4
OAZ3
MRPL9
PPIA
CNNM3
SLC38A10
PERP
XRCC2
AGBL3
TRMT2A
RANBP1
ZSCAN30
PRELID2
AIF1L
NME1-NME2
NME1
THOC3
BCAT1
HSPA1B
STOX1
CNOT4
CDC25B
ALG1
FDX2
CCDC200
NFE2L2
SFT2D3
ATP5PO
FCHO1
DUSP1
NSMAF
GRIK1
PDE1C
IMMP2L
OR2L13
OR2AJ1
LUC7L2
FMC1-LUC7L2
FMC1
ZNF596
DGCR6L
SLC39A3
PWWP2A
PCNA
UBE2H
CERS6
FNDC10
ZC3HC1
VAC14
EPS15
KDM4A
STX7
OGFOD1
NUDT21
PKD2L2
CCDC69
PPM1G
DGCR2
ASCL2
RBSN
HNRNPLL
SRSF7
ANKRD36B
VHL
TRAP1
ARRDC2
CXCL3
SPATA25
NEURL2
CTSA
MIS18A
MRPS11
MRPL46
DOLPP1
ADARB1
RECQL4
LRRC14
COTL1
FOXD4L1
CARD11
VPS33A
ZDHHC12
FBXL12
ATP6V0E2
TTC26
GRWD1
HDAC11
KIF2C
SORBS1
CYP51A1
GTPBP3
ANO8
FAH
SMIM11B
SMIM11A
ANKRD63
SKA3
MRPL57
DCLRE1B
AP4B1
MRPL2
KLC4
LINGO1
CDC42BPG
SRGAP1
TMEM70
ELOC
BOLA2
SLX1B
SLX1A
BOLA2B
BOLA2-SMG1P6
GTF3C4
DDX31
E2F6
EBNA1BP2
CFAP57
TMED1
MRTO4
EMC1
OPRL1
NOM1
LKAAEAR1
RAB33B
FBXO21
NR2F6
GSTK1
SELPLG
MTFR2
TMEM242
YIF1A
TMEM151A
PIGBOS1
PIGB
NUDT2
KIF24
POLR3G
MBLAC2
PHF20
MYPOP
HRK
N6AMT1
TSEN54
CASKIN2
VPS11
JMJD1C
DNTTIP2
SAR1B
PIP4P2
TMEM191C
KLHL36
SUFU
ACTR1A
TMEM204
TRUB2
COQ4
NAGK
KAT2B
TCIRG1
AGPS
MISP3
BIRC5
KIAA0895
ANLN
SYNJ1
H2BU1
H2AW
MYT1
LCN8
SDF2L1
LRRC8B
TBX1
DHDDS
MFSD1
URB1
LZTR1
CDK11A
HLTF
NSUN5
RPUSD2
CCDC32
AQP11
OAF
GLRA1
OIP5
NUSAP1
EIF3H
CNTRL
C5
ZNF75A
TIGD7
POLR1B
PRSS16
PITPNA
PHACTR2
CFAP73
ZYG11A
SWSAP1
MYCL
CYB561D1
XYLB
NOB1
ZNF74
MYLIP
TMEM210
LRRC26
GALNT2
OXTR
CPPED1
AGK
XXYLT1
TNFRSF8
CHCHD3
TNFRSF21
ATE1
VSNL1
AKAIN1
KLF1
GCDH
CCT2
CENPE
OSGIN1
ZNRF1
TENT5C
VPS35
NSFL1C
PLK1
COX14
MMP24
NAE1
HACE1
C3orf80
TRMT61A
MYO18A
EXOSC6
ZNF280D
CPNE9
DLK2
PAX4
PAXBP1
SARS1
FBXO4
RNF141
ZKSCAN4
USP48
ZNF398
TMEM184A
SPHK2
RPL18
FAM83E
HACD3
GPC6
CRELD1
STIL
SRSF10
RARG
TMEM51
UTP25
RNF187
MARCHF4
C5orf51
COMT
WASL
FRMD6
TXNRD2
FAM181B
TOP3A
SMCR8
THEM6
TTF2
ANKRD36
GALNT11
B3GNTL1
ZNF595
CFAP298-TCP10L
CFAP298
SFT2D2
CBFB
TBC1D22A
RNASEH2C
DGAT1
PTPRB
TRIM67
CDKAL1
CREB3L2
ZFYVE19
DNAJC17
ANXA7
GSDMD
CFAP299
BRAP
ACAD10
SNX8
NUDT3
ECI2
TDRKH
ID3
PLD1
DHH
GAREM2
CMPK2
CENPN
HEXD
GGCT
ITPR2
BIRC6
PLLP
SSBP1
RDH5
BLOC1S1
ITGA7
RAB39A
QKI
H1-10
ZMPSTE24
ITSN1
CRYZL1
STX11
RTTN
OXR1
SDF4
B3GALT6
NOL7
POLR2J
SPOCD1
DMTN
GPATCH1
GTF2H4
SOD2
C16orf71
ANKS3
AKAP1
C22orf39
ACAT2
MCUB
SCAF11
METTL1
EEF1AKMT3
CYP27B1
RAD51
RBM28
GAA
SAMD13
GFI1
STK40
ZBTB16
FRG2C
GSN
RAB14
ZNF77
CAMTA1
ZNF555
NUF2
ARID3B
POLR2J3
KXD1
NDUFS7
SLC35A4
APBB3
FANCD2
SERPIND1
ARCN1
TIPARP
KCTD18
CCDC107
POLR3H
AHCY
STX16
LAMP1
TMEM248
YJU2
TRIP4
PPT1
EXO1
WDR74
SCFD2
WASHC5
NSMCE2
ZEB1
POLM
TTLL4
RPS19
TATDN3
NSL1
ASMTL
TMEM120A
P4HA1
TRMO
FARSA
CALR
UBFD1
EARS2
KNL1
BCL7B
SMG8
CCNG2
ITGB3BP
EFCAB7
FBRS
IQGAP3
GSTA4
RABL2B
RBBP5
NOL8
CENPP
FAM227B
DTWD1
HAGH
FAHD1
TMCO3
DCUN1D2
UNG
ALKBH2
TPH2
NEK2
HMGB1
IPO4
CDK7
LARP1
RPS29
SPOP
WDR4
BNIP3L
SUPT7L
SLC4A1AP
TIMM17A
EIF1AD
BANF1
NUP107
NEIL3
MTF2
KAT5
WTAP
DNAJC5
COMMD2
CCDC59
NDUFS3
KBTBD4
POLR3F
DZANK1
HIBADH
SEC31A
PDE6D
SLC45A4
MRPL27
EME1
WDR36
PRRC2B
INTS12
GSTCD
COMMD9
SF3A3
NOS3
COMMD4
PI16
CASC3
COQ8A
CNOT3
ZFPL1
CDCA5
MRM3
GLOD4
NRL
H4C8
NUDT15
CSTF1
AURKA
THAP9
TXLNA
CCNA2
SLC25A51
NCAPH
CDK5RAP1
BIRC2
GTF3C3
ASF1A
RTN4
USP2
CCDC88A
RTF2
VIM
BAIAP2
C6orf89
CCDC115
OGDH
STX18
TSFM
EBAG9
BCAS3
HDAC2
AP3S2
POM121
POLG
PEX3
ADAT2
YARS1
S100PBP
ZNF581
TMEM262
H4C15
H4C14
RRP12
USPL1
KDM3A
LRRC59
TBRG4
RBM8A
TRAPPC6A
BLOC1S3
KIF20A
BRD8
EDC3
ATR
NSUN4
USP54
RABGEF1
STAT3
IL1R1
CCDC146
CCDC106
TRIAP1
STAM2
HUS1
YTHDF2
DCAF11
PGAM5
ATG14
KLHL20
NR1H2
PLEKHM3
DDX18
KIAA1586
ARFGEF2
CWC25
ZNF684
CCDC86
IGF2BP3
MED23
DPY19L4
CFAP54
GOLGA7
TRMT6
MCM8
SSNA1
ANAPC2
POLR3B
CKAP2L
MRPL44
SUPV3L1
ATG9B
ABCB8
BSDC1
KLHL32
C8orf37
AP1M1
FBXL13
ARMC10
POLR3E
D2HGDH
ATP6V0D1
AGRP
OPA1
TMEM259
MTIF2
GDAP1
BLCAP
CMSS1
MTBP
MRPL13
MACC1
DYNC2I1
MRPL45
TBC1D19
SEPTIN9
ACVR1
AAR2
NBN
INTS7
DTL
SAP30BP
RECQL5
TTC31
SASS6
B4GAT1
SNRPE
ITFG2
LSM5
FANCI
PMVK
TMEM208
LRRC29
SGO1
SLC24A1
INTS14
DZIP3
CIP2A
RGL1
CEP135
ZGRF1
LARP7
RTEL1
PIKFYVE
TTC27
ZBTB45
QTRT2
CCDC191
FAM228B
TFB2M
CNST
PFDN4
TMEM186