ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX20599717 | Caco-2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX16386913: 293

◢ SRX3010110: A549

◢ SRX3010111: A549

◢ SRX24188777: BJ

◢ SRX24188786: BJ

◢ SRX20550182: BT67

◢ SRX20550183: BT67

◢ SRX20550184: BT67

◢ SRX20599715: Caco-2

◣ SRX20599717: Caco-2

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX10616096: GM12878

◢ SRX10616097: GM12878

◢ SRX11374678: GM12878

◢ SRX11374679: GM12878

◢ SRX3322296: GM12878

◢ SRX3322297: GM12878

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX10478224: Hep G2

◢ SRX10478225: Hep G2

◢ SRX2423815: Hep G2

◢ SRX2423816: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX2023732: iPSC derived cardiac cells

◢ SRX2023764: iPSC derived cardiac cells

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX2423402: K-562

◢ SRX2423403: K-562

◢ SRX5457481: K-562

◢ SRX5457482: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX8064823: Lymphoblastoid cell line

◢ SRX8064824: Lymphoblastoid cell line

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX11399800: NCI-H1963

◢ SRX11399801: NCI-H1963

◢ SRX11399802: NCI-H1963

◢ SRX9779520: NCI-H1963

◢ SRX4732741: Pre-B cells

◢ SRX7981741: Prostate cancer

◢ SRX7981742: Prostate cancer

◢ SRX7981743: Prostate cancer

◢ SRX7981744: Prostate cancer

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX9562892: RH-4

◢ SRX9562897: RH-4

◢ SRX19212560: SK-N-MC

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

FRG2C
MTRNR2L1
NPAS4
CAMTA1
PKDCC
DUX4
TDRD7
ZEB1
TMCO3
DCUN1D2
CALM2
NOS2
FRG2
C20orf204
COLEC12
POLR3H
CCDC88A
SLC5A10
PGAM5
OVOL1
GSN
RAB14
LGR5
ASXL1
TEAD1
ZNF555
SLC35A4
APBB3
CDON
ARHGDIA
CALML5
CDX2
USP17L22
USP17L20
SYBU
TBL1XR1
RNASEK
C17orf49
LOC102724265
RBBP8NL
JUND
FADS2
ORAI3
PLCG1
TENM3
SPO11
CA4
DSCAML1
RBL2
KEL
VIM
ALDH3B2
CLDN15
XKR7
SAPCD2
PLD6
GNLY
GLI4
RAPGEF1
ZNF316
SEC31A
THAP9
KLF3
UBE2I
ENTPD8
RYK
EPHB1
KMT2A
ZNF783
PNPLA3
ZNF581
CCDC106
ARRB1
EPS8
CCDC200
RUBCN
FYTTD1
TPBGL
C11orf80
PKIB
TLCD5
MUC12
ST3GAL3
SLC12A3
AIF1L
RNF157
PDE4D
HRK
CDH1
EDDM3B
DDHD2
PPP1R13L
POLR1G
TMEM170B
CHRDL2
QSOX2
ASCL2
CDC14B
TMPRSS4
TUBA1A
TSR3
GNPTG
TJP1
RHOBTB1
PKP2
DLC1
ZNF641
BHLHA9
LRRC56
HRAS
TTC21B
BEND3
RPS6KA4
DLX4
RNF187
KXD1
HIBADH
RGPD2
PRKAG2
TEPSIN
NDUFAF8
AP5B1
PPDPF
RGPD1
ZFHX3
RND3
PARP4
LRRC37A3
CCNI2
KMT5B
TMEM199
POLDIP2
RAB17
PHF21A
TXNRD3
PACS1
TMEM210
LRRC26
SLC46A1
FAM78A
SSH3
YAP1
CACNB2
PRDM6
MRS2
UNC5A
SPATA25
NEURL2
CTSA
RAB11FIP4
ECI1
HTR5A
MTRNR2L2
MSH3
DHFR
IQSEC3
MTRNR2L8
CPLX2
ZNF77
NKX1-1
GBA
SMIM17
LIN28A
NBPF1
INSM2
UTP20
CYB5R4
NUF2
ARID3B
FAM24A
ZNF335
POLR2J3
PAXBP1
NME1-NME2
NME1
NDUFS7
CRNKL1
CFAP61
RRP15
WASHC2C
RBM48
PEX1
FANCD2
SERPIND1
UTP25
NAGPA
ARCN1
TIPARP
KCTD18
NUP214
HEXA
RAB37
ZMPSTE24
TRMT1
NACC1
PSMD9
HPD
MTFR2
CCDC107
AHCY
STX16
KCNH7
TMEM242
LAMP1
VPS33A
CRBN
TMEM248
YJU2
WASHC2A
RBM19
RAB42
SUMF1
QTRT1
TRIP4
IBA57
PPT1
SPNS1
EXO1
USP35
KCTD21
DLGAP3
WDR74
HPCA
SCFD2
BARHL1
WASHC5
NSMCE2
ZCCHC7
SSBP1
RTBDN
COPS7B
USP30
POLM
SNAP25
DHDDS
TTLL4
EIF2D
RPS19
TATDN3
NSL1
ASMTL
SLC39A3
TMEM120A
CELSR3
P4HA1
TRMO
FARSA
CALR
UBFD1
EARS2
TTC26
KNL1
METTL1
EEF1AKMT3
TIGAR
BCL7B
MARCHF4
SMG8
VPS50
HEPACAM2
IDH3B
PWWP2A
CCNG2
ITGB3BP
EFCAB7
BIRC5
FBRS
IQGAP3
GSTA4
TDRKH
CDKN1A
PDE4A
RABL2B
CYP27B1
RBBP5
SOD2
NOL8
CENPP
FAM227B
DTWD1
SPATA2
OSCAR
NDUFA3
HAGH
FAHD1
ZCWPW1
MEPCE
CHGB
UNG
ALKBH2
TPH2
NEK2
HMGB1
IPO4
MIS18A
SPDYE14
SPDYE10P
CDK7
LARP1
RPS29
LPIN1
GTPBP6
SPOP
WDR4
RTTN
BNIP3L
SARS1
SUPT7L
SLC4A1AP
BOLA2
EPHA10
SVOP
GATB
RFC1
NFE2L2
TIMM17A
SLX1B
SLX1A
BOLA2B
EIF1AD
BANF1
NUP107
NEIL3
MTF2
KAT5
TRUB2
COQ4
N6AMT1
WTAP
DNAJC5
COMMD2
CCDC59
NDUFS3
KBTBD4
POLR3F
DZANK1
RDH5
BLOC1S1
PDE6D
KLHL18
KIF9
SLC12A9
RFX1
PSME3
RAD51
MAPK8IP2
SLC45A4
MRPL27
EME1
WDR36
PRRC2B
INTS12
GSTCD
RBM28
COMMD9
SF3A3
NOS3
COMMD4
PI16
CASC3
PDE1C
COQ8A
CNOT3
CPPED1
ZFPL1
CDCA5
MRM3
GLOD4
EPN1
FBXO5
LUC7L2
FNBP1
KIF18B
KIAA0895
UBE2L3
NRL
H4C8
NUDT15
L1CAM
CBLL1
DHX40
CSTF1
AURKA
ITGA7
DRG2
TXLNA
PAFAH2
CCNA2
SLC25A51
BOLA2-SMG1P6
NCAPH
CDK5RAP1
BIRC2
GTF3C3
ASF1A
PYY
NAGS
MFSD1
RTN4
USP2
RTF2
BAIAP2
COL23A1
C6orf89
CCDC115
OGDH
STX18
TSFM
EBAG9
GPATCH3
VTA1
NMBR
TOMM22
C12orf66
BCAS3
SMYD5
HDAC2
AP3S2
POM121
CRYAA2
CRYAA
POLG
PEX3
ADAT2
YARS1
S100PBP
TMEM262
MRPL40
HIRA
H4C15
H4C14
RRP12
CRKL
USPL1
KDM3A
LRRC59
TBRG4
RBM8A
TRAPPC6A
BLOC1S3
KIF20A
BRD8
EDC3
ATR
NSUN4
USP54
RABGEF1
C16orf71
ANKS3
NOP16
HIGD2A
STAT3
ATL3
IL1R1
CCDC146
TRIAP1
GTF2H3
EIF2B1
STAM2
HUS1
YTHDF2
DCAF11
UTP11
ATG14
KLHL20
SFSWAP
NR1H2
PLEKHM3
TOP3B
DDX18
AANAT
UBE2O
KIAA1586
ARFGEF2
CWC25
ZNF684
CCDC86
IGF2BP3
MED23
DPY19L4
CFAP54
NAGK
GOLGA7
TRMT6
MCM8
SSNA1
ANAPC2
POLR3B
UBE3B
CKAP2L
GRWD1
MRPL44
SUPV3L1
ATG9B
ABCB8
BSDC1
KLHL32
C8orf33
C8orf37
AP1M1
FBXL13
ARMC10
ESCO2
HNRNPD
POLR3E
D2HGDH
ATP6V0D1
AGRP
OPA1
TMEM259
VPS37D
MTIF2
ZC3HC1
GDAP1
BLCAP
CMSS1
MTBP
MRPL13
MACC1
DYNC2I1
MRPL45
NUP35
TBC1D19
SEPTIN9
CLK3
ACVR1
AAR2
GTF3C4
DDX31
LTV1
COASY
NBN
INTS7
DTL
FAM72C
SAP30BP
RECQL5
TTC31
SASS6
RABEP2
B4GAT1
NOL6
SNRPE
ITFG2
LSM5
FANCI
E2F6
PMVK
TMEM208
LRRC29
DHX37
BRI3BP
SGO1
SLC24A1
INTS14
GTF2H4
DZIP3
CIP2A
C5orf51
RGL1
CEP135
ZGRF1
LARP7
UFD1
CDC45
RTEL1
CFAP298-TCP10L
CFAP298
SKA3
MRPL57
PIKFYVE
CYRIB
TTC27
PGBD5
EBNA1BP2
CFAP57
ZBTB45
QTRT2
CCDC191
FAM228B
TFB2M
CNST
PFDN4
TMEM186
PMM2
RABGAP1L
PPWD1
CENPK
CACTIN
PIGU
COX16
TMEM41A
SKA1
FMC1-LUC7L2
FMC1
BRMS1
URB1
RAB5IF
NAT10
PUS10
PEX13
NUP54
RPTOR
PRCP
DDIAS
DNAJC25-GNG10
DNAJC25
RBM42
TACO1
ZNF830
CCT6B
MRPS23
ARPC5
KLF1
TOMM40
MCM7
AP4M1
PRMT2
TEKT2
ADPRS
STMN3
P2RX6
GTPBP10
NDUFAF5
ESF1
GCDH
VPS9D1
UTP3
EXOSC5
BCKDHA
ABCB10
GPATCH4
CENPS-CORT
CENPS
PSEN2
XRCC2
NLE1
NUCKS1
SWSAP1
WDR62
THAP8
THAP7
PHOSPHO2
CCDC173
ARHGEF1
TFB1M
YIF1A
TMEM151A
GLRA1
FAM98B
CNOT4
ZNF165
PCIF1
NR6A1
TFPT
PRPF31
POC5
MGAT5
POLR3D
CCNL1
FAM161A
ZC3H15
WBP1
INO80B
PUM3
NMNAT1
LZIC
SECISBP2
EIF3F
POLN
HAUS3
NCOA7
SACM1L
SIRT4
FXN
CDC73
ATP5F1E
CDC25B
MIS18BP1
GET3
PMS2
AIMP2
PBK
LSM12
TEFM
G6PC3
SPG21
FAM133B
DSCC1
DCLRE1B
AP4B1
RAB11A
RHEBL1
TBC1D30
MRPL21
IGHMBP2
ZCCHC14
PPIL2
ULK4
NOL7
PPP6R1
RIMBP3C
ZNF558
IREB2
TPM4
ZNF778
ANGPTL6
ANK1
SNX16
SF3B6
RNF166
PNO1
RBKS
MRPS15
BABAM2
CCNB1
LZTR1
ING3
RRM2
MRPS33
PAK1IP1
HEATR1
C6orf52
WDR46
PFDN6
RRS1
ADHFE1
SELENOH
SHOX2
RSRC1
TIGD1
EIF4E2
MMAA
ADNP
DDX41
ANLN
C2orf42
SMIM12
RPAP3
GATAD2A
SEC13
PDE11A
BNIP1
CENPF
PARL
CCDC142
STAT1
BAG6
APOM
UBE2Q1
CFAP299
ZKSCAN8
MRPS35
DCT
DUS2
DDX28
RPS27L
LRP2BP
SPAAR
INTS5
VPS26C
KIF15
KIAA1143
VPS35
MRPS18C
HELQ
TSN
ZAR1L
BRCA2
TBP
PSMB1
MRPL48
DPP9
SYT11
GON4L
ACVR2A
AURKB
ECSIT
CBWD5
GTF3C5
SRSF11
DSTYK
RIMBP3B
METTL15
KIF18A
ESYT2
MRPL1
AGBL3
TFIP11
PSMD3
ATAD2
ACOX3
CCT2
VPS29
RAD9B
TMEM222
KCTD9
CDCA2
TRMT61B
TAF13
SYNJ1
NTAQ1
MRPL39
GFM1
PRAME
E2F1
ANKRD12
RPS7
TOP3A
SMCR8
RPP25
PFKM
SLC35B1
PHF19
CORO1C
TAMM41
KYAT1
IPO11
PIH1D2
NKAPD1
TMED1
MITD1
EIF2B3
GCLC
WDR11
PTPRF
PRMT5
DPF1
RUVBL1
DCAF10
PPIP5K2
GIN1
ANKRD37
TMEM181
RLF
RBL1
RPL27
WDPCP
DDIT4
PTPN4
FBXO48
CAP1
APLF
PCNA
ZP3
H6PD
STYXL1
PLS1
ABCB6
TAF6L
YBEY
PDRG1
MCM3AP
MARCHF8
SHC1
CKS1B
IMP4
SUGCT
MPLKIP
NSA2
GFM2
BOD1
PGK1
ZSCAN22
MIA3
MLX
ZNF473
VRK3
KDM2A
SLC44A1
SLC33A1
SMN2
SMN1
CLUAP1
ZNRD2
TROAP
FAM89B
DNAJC11
TXNDC9
EIF5B
AP5Z1
NOL10
INHA
SKIV2L
NELFE
PSMF1
INO80C
FAM207A
LRRC49
RAD54L
DDX21
CCDC116
TEX46
KDM1A
CDC6
OXNAD1
DPH3
CTU2
CHST12
HCFC2
GLT8D2
SRRD
HPS4
NEU1
HBP1
OIP5
NUSAP1
ERMN
HDAC11
CTPS1
XRN2
NADK2
KLHL12
GRN
VPS45
TICRR
MDH1
FBXW8
RPA2
HSD17B8
TIMM9
KIF2C
KIAA0586
AARS2
ZNF398
PALB2
DCTN5
CDT1
RPP40
SNRPC
LSG1
LTA4H
RIOK1
CAGE1
RC3H2
BUB1B
WFDC3
POU2F1
DNTTIP1
DPH1
SNRPB2
RNASE4
NUP155
NFIB
ANG
PARP2
SMG7
PIGBOS1
PIGB
INKA2
SH2B1
FAM98A
COG2
TSEN54
CASKIN2
DIP2A
SNX17
EIF2B4
HIP1
CZIB
RTN4RL1
THAP10
RAD51AP1
C12orf4
ATG5
C16orf46
NOC3L
SGO2
STBD1
MBIP
CAND1
AVL9
TCF4
SOGA1
NRCAM
SEC11A
TTK
C2CD5
RAPGEF6
H4C3
H1-6
SHQ1
TCP11L2
UGGT1
DUS3L
MAN2C1
ADAMTS14
SPHK2
NUDT2
PRDM11
NUP42
GALK2
IFNAR1
GTF2H2C_2
LMNA
C16orf90
BCAR3
SCNM1
LYSMD1
VPS11