ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9779520 | NCI-H1963
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX16386913: 293

◢ SRX3010110: A549

◢ SRX3010111: A549

◢ SRX24188777: BJ

◢ SRX24188786: BJ

◢ SRX20550182: BT67

◢ SRX20550183: BT67

◢ SRX20550184: BT67

◢ SRX20599715: Caco-2

◢ SRX20599717: Caco-2

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX10616096: GM12878

◢ SRX10616097: GM12878

◢ SRX11374678: GM12878

◢ SRX11374679: GM12878

◢ SRX3322296: GM12878

◢ SRX3322297: GM12878

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX10478224: Hep G2

◢ SRX10478225: Hep G2

◢ SRX2423815: Hep G2

◢ SRX2423816: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX2023732: iPSC derived cardiac cells

◢ SRX2023764: iPSC derived cardiac cells

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX2423402: K-562

◢ SRX2423403: K-562

◢ SRX5457481: K-562

◢ SRX5457482: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX8064823: Lymphoblastoid cell line

◢ SRX8064824: Lymphoblastoid cell line

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX11399800: NCI-H1963

◢ SRX11399801: NCI-H1963

◢ SRX11399802: NCI-H1963

◣ SRX9779520: NCI-H1963

◢ SRX4732741: Pre-B cells

◢ SRX7981741: Prostate cancer

◢ SRX7981742: Prostate cancer

◢ SRX7981743: Prostate cancer

◢ SRX7981744: Prostate cancer

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX9562892: RH-4

◢ SRX9562897: RH-4

◢ SRX19212560: SK-N-MC

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

MTRNR2L1
PPT1
ZMPSTE24
ZNF684
CAP1
MBIP
SKA1
PPIE
TRIT1
EXO5
UTP20
RPH3A
RLF
ARHGEF2
RABL2B
MRPL45
HPCAL4
TRMT1
NACC1
IQGAP3
NT5C1A
CDK7
RPS29
MYCL
SHCBP1
SSH2
CRNKL1
CFAP61
RAD51
QTRT1
NUF2
FAM161A
PPBP
PF4
GCNT2
MFSD2A
TRAPPC6A
BLOC1S3
DHX37
BRI3BP
POLR3D
NCAPH
UTP25
FRG2C
C12orf66
DIAPH3
BMP8B
WDR7
ATP6V0D1
AGRP
NBN
MOK
ADAT1
ZP4
PSME3
PAX9
GRWD1
RTTN
MTFR2
HSPA12A
ENO4
SEMA3C
SPACA1
PMAIP1
LAMP1
TRMT61A
MAB21L2
RRP15
COX8C
C16orf71
ANKS3
HEATR1
GPATCH4
BIRC5
DZIP3
CIP2A
WDR4
ZNF24
AP1S1
NBPF1
TIMM21
FBXO15
SPATA25
NEURL2
CTSA
SLF2
ATP5F1A
CDC20
CFAP299
CORO2A
BLM
CCDC102B
TMX3
PUM3
EXO1
ACVR1
PHB2
RIOK3
FANCI
CDC16
ZCCHC7
SRCAP
LOC730183
FBXO5
UFD1
CDC45
KIF23
URB1
RBKS
BABAM2
SCFD2
KPNA2
UNG
ALKBH2
ZGRF1
LARP7
LYPLAL1
KIF2C
SMYD5
PNO1
DPH1
RTN4RL1
COMMD6
UCHL3
UTP4
DERPC
CHTF8
METTL11B
BOLA2
SLX1B
SLX1A
BOLA2B
BOLA2-SMG1P6
TMEM241
AURKB
TICRR
MOCS2
MIS18A
APRT
DMAC1
KATNAL2
LYRM4
FARS2
WWP2
MAGI1
TTK
AEN
PLEKHD1
RBM19
FAM200B
GTF3C4
DDX31
IFNG
EDC3
FAM72C
SRGAP2B
FAM72D
CKAP2L
TRAPPC8
VPS4B
ST6GALNAC1
METTL1
EEF1AKMT3
CYP27B1
NOL6
TOM1
HDHD2
POU2F1
WDR26
ZNF77
NEK2
TTC27
CD46
TFB2M
CNST
CCT2
NPC1
CFAP53
SLC25A17
CCNA2
CENPS-CORT
CENPS
PRR3
GNL1
FBXW9
TAF13
MZT1
BORA
RPRD1A
PRLHR
NUDT2
KIF24
ARMC2
AIP
RBBP8
CKS2
USP37
CNOT9
RNF125
VPS33A
CCNG2
RDH5
BLOC1S1
COMMD4
ITGA7
TMEM186
PMM2
TRAPPC2L
GALNS
ATL3
LRRC49
THAP10
NKX2-1
CEP135
MRPL1
HEXA
COL9A2
DSEL
USP2
MYDGF
IKBKB
TAF4B
PPP1R3B
KIAA0895
ANLN
POLR2J2
SULT1A4
SULT1A3
GBA
FAAP24
CEP89
MRPS18B
KAT5
PIK3C3
TIMELESS
NTPCR
MRM3
GLOD4
KIF22
AP1B1
MRPS33
MCM10
TBC1D4
WASHC5
NSMCE2
STAM2
CCDC86
RPS3A
DDX5
SLC35D1
PEX19
PCCA
NTAQ1
CLSPN
STK36
RNF25
CYB5R1
ZNF558
MCRS1
TFAP2A
RETNLB
TROAP
TIMM9
KIAA0586
ZNF408
ARHGAP1
CYB5R4
E2F3
VPS41
SH3KBP1
BCAS3
FAM183A
SLC38A8
PMS2
AIMP2
CCNB1
RNF138
CYP21A2
PMVK
WDR61
POLR1B
DPH2
ATP6V0B
CRISPLD1
TMCO3
DCUN1D2
ADPGK
SLC39A6
LRATD2
CDK18
ZFPL1
CDCA5
TMEM262
CLK3
RBL2
TOMM70
LNP1
H1-2
NKX2-8
NAT10
SLC12A9
ZNF778
C16orf46
ADSL
HNRNPU
RFX5
ESCO2
QTRT2
CCDC191
POLQ
NCAPD3
VPS26B
RFWD3
HUS1
SUGP2
ARMC6
NME7
BLZF1
RMC1
PDP2
RPS27L
INTS9
HMBOX1
TRIP4
DDX19A
METTL18
C1orf112
PTPRD
SPG7
MRPL27
EME1
SHC1
CKS1B
CLYBL
MAK16
SRGAP2
FAM72A
TBC1D16
CCDC40
SECISBP2
HROB
SLC25A6
PBK
SMC2
STK11IP
MBD1
C6orf89
NOC3L
WDR74
TAF6L
NOL10
PTPN4
VPS11
CENPH
CDC25B
SRGAP2C
FAM72B
ING5
SFXN2
ARL3
UPF3A
KIAA0513
CLN5
KIF18B
SPG21
HSPBP1
BRSK1
WDR3
GDAP2
PIBF1
DIS3
TDO2
RPTOR
TCF4
DLGAP5
FAM161B
COQ6
RPUSD4
FAM118B
ZBTB37
ARL13B
TAF1A
CCDC146
TFIP11
DHODH
WDR18
ASPM
NOB1
USP35
KCTD21
GLE1
VTI1B
DIRAS2
EBNA1BP2
CFAP57
CHRNA9
PSEN2
MYBBP1A
PDE4B
MTRNR2L2
MSH3
DHFR
PSMD9
HPD
ERCC5
LEMD3
EFCAB6
DCUN1D1
DDHD1
NUP35
PIF1
GPX4
RNF187
PWP1
ZNF594
SPNS1
SGO2
MCOLN1
GEMIN6
KNL1
SF3A3
MRPS28
STAP2
MPND
HASPIN
ZNF598
PIPOX
CCDC39
SCRN3
CIR1
TXNL4B
DHX38
F11R
TBC1D30
GNS
UQCRC2
ESPL1
RPL17-C18orf32
RPL17
C18orf32
COMMD5
MFSD1
UTP11
IPO11
THADA
RCL1
FKBP1A
RPUSD2
CCDC32
KIF14
LHFPL1
RPP40
PACRGL
CENPN
LACTB
CRYBG3
RFC1
RIOK1
CAGE1
PPIH
GTSE1
PPIB
CXXC1
RRP12
SASS6
POLN
HAUS3
PISD
PRPF38A
ORC1
GAR1
TTC23L
CALHM4
DHX40
CASP7
RASL11B
GNB3
MTR
MRPL24
TM9SF1
CNDP2
ERCC3
IER3IP1
RGS8
ARID3B
TRUB2
COQ4
TXLNA
TMEM208
LRRC29
STYXL1
VAC14
DYRK1B
NOP9
DHRS1
TAF1C
ADAD2
DYRK3
ZNF396
PRCP
DDIAS
TEKT2
ADPRS
WDPCP
MDH1
SMG5
TMEM79
MND1
ISG20
SP4
TSTD1
DHDDS
CHST12
SPCS1
GLT8D1
YIPF3
POLR1C
ZSCAN30
SRD5A1
ACADM
KLHDC4
MCM5
PIGU
SWSAP1
RRS1
ADHFE1
TOP3A
SMCR8
TWNK
MRPL43
DGKB
POP7
MELK
SMAD2
IREB2
RNF166
PDE11A
CTU2
SCNM1
LYSMD1
ZNF202
NEMP1
COQ9
CIAPIN1
TSACC
CCT3
SPATA4
PDCD2L
SLC35A4
APBB3
WDHD1
SOCS4
RPF2
RANBP6
TRAF5
GATB
CNPY3
TSC22D4
NPL
NYAP1
PDE8A
ANAPC7
CARS2
AP2S1
MAP11
CEP295
PCNT
C21orf58
TMEM9B
SNRPA
C19orf54
SSR2
EHMT1
GRAMD2A
LRRN3
CCNB2
MDN1
ARFGAP2
UBE2C
RNH1
ENOX2
ZNF587
FAM98B
LMNA
CDIP1
TTF2
RNF40
CCDC189
INPP5K
BAZ1B
FAM234B
ATP6V0A1
MEX3A
MAPRE2
CRELD2
ALG12
IPO4
NUP107
RSPH14
MED20
BYSL
RAB36
TMEM260
GALNT1
TRMT6
MCM8
WDR46
PFDN6
DIMT1
NIP7
COG8
SENP7
KXD1
NSFL1C
PIK3CA
INO80
DNMT3B
SOCS3
ST8SIA3
ACOX3
SLF1
KIAA0825
TMEM234
EIF3I
DAD1
ZSCAN29
TUBGCP4
DPP4
SLC14A1
POLR2J3
WDR62
THAP8
FBXW8
PRIM2
GFUS
ABHD3
PPP1R14D
SCG5
GPATCH3
E2F6
XRN2
FBXO43
ATF3
POLR2K
PIGO
SNX19
SF3B4
PARP9
DTX3L
VPS9D1
UBE2Q1
ACTR6
FCF1
AREL1
TMED5
CCDC18
MRPL12
NCKAP5L
EXOSC5
BCKDHA
SERP1
EIF2A
RSPH3
SLC35F5
SLC7A6OS
PRMT7
GINS3
SZT2
MED8
DOLPP1
NUDT1
MRM2
ORC2
SMYD3
RCCD1
ACYP1
ZWILCH
RPL4
PFDN2
NIT1
ZC2HC1C
MLN
SCAMP3
CEP128
SDE2
KIZ
LRP2BP
ANKRD37
C18orf21
SLC35B2
SLC35A3
CFDP1
DENR
ARL2BP
GOLPH3L
PHLPP2
NAGPA
INO80C
CDK5RAP3
CEP162
GNL2
NCAPH2
LMF2
TPGS2
ZNF33A
MRM1
RAVER1
BAG4
GPR107
CHAC1
LSM1
FBL
OR2T34
VPS35
GPN1
CCDC121
TK1
BRCA1
EIF3D
PDF
RTF1
POLD1
TMEM178A
BAG6
APOM
VPS45
S100A13
PPIL1
CHTOP
PCID2
CUL4A
SF3A1
CCDC157
TTC5
RASAL2
RIT1
IBA57
COMMD9
COG2
VPS72
PPP1R12B
PLK4
SLC38A7
EIF2AK1
PTCD2
MRPS27
WDR5B
PYGO2
LOC101928120
HEG1
SPATA2
LTV1
PLS1
ZNF721
PIGG
PTRHD1
CENPO
DDX19B
DYNLL1
MUL1
CEP126
ANGPTL5
TIGD4
ARFIP1
SPATA33
BCL7A
DNAH14
MVD
DPY19L4
ZCCHC14
ZNF473
VRK3
NUDT9
MTHFR
NOLC1
CLCN6
TTI1
RPRD1B
RBM7
C11orf71
DBF4B
NCAPG
EXOC1
SMIM5
HNRNPH2
PPIL3
NIF3L1
SPAG1
OGDH
GTF2H3
EIF2B1
KLHL20
DUS2
DDX28
GINS1
ABCA3
CFAP206
LAP3
KLF1
GCDH
MRPS18C
HELQ
EXOSC3
NASP
POLD3
THAP5
DNAJB9
CYB5A
USP36
ZZEF1
CYB5D2
H3C15
H3C14
H2AC19
H2AC18
ASB8
PSMB4
NCOA7
STAT1
NOM1
SRP54
SMC4
IFT80
TIPRL
TTC39C
CEP43
VPS8
ASH1L
FUBP3
LMAN1
MED25
FUZ
ZNF701
EPYC
NAGK
EIF2B3
RECQL
GOLT1B
DHX33
RAB5B
URB2
TAF5L
SPTY2D1
SNAP47
JMJD4
HJURP
SLC25A44
POLA2
EIF4A1
TK2
CKLF-CMTM1
CKLF
MCF2L
CFAP54
BUB1B
ADAR
TIPIN
TXNL4A
RBFA
IGSF9
ZBBX
TMEM147
LAMA3
KLF5
RAB23
ANGPTL6
LTN1
AAAS
PPAN-P2RY11
PPAN
STOML2
RHNO1
FOXM1
CNPY2
IQCG
COA3
CNTD1
MXD3
FKBP3
FANCM
ARIH1
KLC2
LMLN
P2RY11
ZCWPW1
MEPCE
CENPF
LRRC57
HAUS2
ZNF507
IPO9
SERPINB4
MAD2L1
KMT2D
PIGW
MYO19
COX19
JAM3
NF2
BOLA1
EIF2D
CCDC59
WBP1
INO80B
CDC73
RBL1
NOC4L
DDX51
PRRT1
PPT2
TONSL
NDFIP2
ZBTB7C
GRHL3
EHD3
CAPN14
NEIL3
NDUFAF5
ESF1
SHOX2
RSRC1
CDC6
NDUFB3
FAM126B
PARPBP
NUP37
SAXO2
EFL1
XPO5
POLH
CHCHD3
SNRPD2
QPCTL
MEA1
KLHDC3
IFT57
CENPA
ZNF669
HYKK
CIART
ARMCX5-GPRASP2
ARMCX5
LY75-CD302
LY75
POLR3H
TMEM41A
CBWD5
CBWD3
SETD4
CBWD6
CWF19L1
MRI1
TEPSIN
NDUFAF8
VPS53
OXR1
TMEM231
E2F2
AIFM1
USP21
EML5
NUP214
FARSA
CALR
MIA3
RANGAP1
BRAP
ACAD10
PELP1
L3HYPDH
JKAMP
AKR1A1
SLC35C2
EDC4
MRE11
ANKRD49
DPH5
SLC30A5
BLOC1S2
POLR2C
MAD1L1
ZNF319
USB1
ZNF223
BLMH
ACAA2
LAGE3
VPS26C
ECSIT
KCTD9
CDCA2
CDT1
EEF1AKNMT
USP32
VPS37A
CNOT7
PIMREG
POLL
DPCD
ZNF133