ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11374678 | GM12878
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX16386913: 293

◢ SRX3010110: A549

◢ SRX3010111: A549

◢ SRX24188777: BJ

◢ SRX24188786: BJ

◢ SRX20550182: BT67

◢ SRX20550183: BT67

◢ SRX20550184: BT67

◢ SRX20599715: Caco-2

◢ SRX20599717: Caco-2

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX10616096: GM12878

◢ SRX10616097: GM12878

◣ SRX11374678: GM12878

◢ SRX11374679: GM12878

◢ SRX3322296: GM12878

◢ SRX3322297: GM12878

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX10478224: Hep G2

◢ SRX10478225: Hep G2

◢ SRX2423815: Hep G2

◢ SRX2423816: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX2023732: iPSC derived cardiac cells

◢ SRX2023764: iPSC derived cardiac cells

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX2423402: K-562

◢ SRX2423403: K-562

◢ SRX5457481: K-562

◢ SRX5457482: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX8064823: Lymphoblastoid cell line

◢ SRX8064824: Lymphoblastoid cell line

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX11399800: NCI-H1963

◢ SRX11399801: NCI-H1963

◢ SRX11399802: NCI-H1963

◢ SRX9779520: NCI-H1963

◢ SRX4732741: Pre-B cells

◢ SRX7981741: Prostate cancer

◢ SRX7981742: Prostate cancer

◢ SRX7981743: Prostate cancer

◢ SRX7981744: Prostate cancer

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX9562892: RH-4

◢ SRX9562897: RH-4

◢ SRX19212560: SK-N-MC

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

GSTA4
CCDC107
FRG2C
H4C8
FBXO31
BORCS6
B4GAT1
BRMS1
NDUFS7
CCDC200
RAB11A
BCAR3
HSPA6
LAMP1
HES7
ALOXE3
METTL26
MED16
DNAJB4
SACM1L
LASP1
ELF1
WBP4
LUC7L2
FMC1-LUC7L2
FMC1
DUX4
RNASE4
ANG
PLXDC1
PRMT5
MYNN
ACTRT3
CRYAA2
CRYAA
TRIM7
PCGF2
PSMA3
OR1F1
DCT
TMEM259
CNN2
H4C12
ILF2
ZNF839
KMT5B
POLR3E
MTRNR2L1
H2BC5
H1-4
KNL1
H1-2
H4C3
H1-6
FCHSD2
H1-3
LTA4H
HMGN4
H4C1
H3C1
H1-1
RDH5
BLOC1S1
ITGA7
H4C11
FRG2
PTPN6
C12orf57
PLEKHG2
XRCC5
SRSF7
DPP9
H3C3
H2BC3
VPS33A
NCOA7
POLG
SMARCC2
H2BC11
H2AC11
H3C2
H4C2
H2AC4
TRMO
TIA1
SPRTN
EXOC8
H3C15
H3C14
H2AC19
H2AC18
SHF
H4C15
H4C14
H3C13
H2BC18
H2BC21
H2AC21
H2AC20
H3C8
H2BC10
SAE1
H1-5
H3C11
H2AC16
C8orf37
H4C13
C17orf97
LBX2
PCGF1
MDP1
CHMP4A
RNASET2
NBN
HDAC4
H2BC8
H2AC8
WASHC2A
EIF4A3
ZBTB4
SLC35G6
POLR2A
CYP4F11
WDR74
RPL12
LRSAM1
CCDC115
PARP2
POLDIP3
ANXA2
POLR3B
ZDHHC5
MICU2
SGF29
CBWD5
COMMD4
H4-16
H2AJ
HEXA
UBC
HNRNPA2B1
CBX3
VPS35
H2BC12
H2AC12
SNRPB
TMEM107
H4C5
SIRT4
H4C6
CTDP1
STARD7
PIH1D1
ALDH16A1
RSRP1
SLCO5A1
GBA
H4C9
H4C7
H3C7
H2BC9
MARCHF8
RPLP0
C6orf62
ZNF84
LZTR1
TMEM238
RPL28
WASF2
FUS
COG6
SNRNP70
CCND3
TAF8
UBE2S
E2F3
PAXBP1
LIG4
ABHD13
MPZL3
TRA2B
HMGA1
CBWD2
CASC3
RPL5
DNAJB1
ANKRD26
NARF
CALM1
KNTC1
EXD1
CHP1
USP42
SRSF6
H2BC4
H2AC6
SRFBP1
H4C4
H2BC6
POLR2J3
SRSF3
INO80C
EIF4A2
TRAF7
CTSO
NUDT15
POLE4
NDUFA2
IK
U2AF2
PHF23
GABARAP
DNAJC25-GNG10
DNAJC25
GTF2A1
ZSCAN30
KCNC3
PTPN2
SPAAR
MIS12
DERL2
SUCO
POC5
COMMD1
HNRNPH1
CCT4
C12orf65
TATDN1
NDUFB9
NCOA5
ZNF706
H3C10
EIF3A
H2BC14
H2AC14
MLH3
TXN2
FAM71E1
EMC10
H2BC13
H2AC13
CDKN1A
BCLAF1
LCMT2
ADAL
CBWD1
PCIF1
PNKD
AAMP
KLF7
ZNF143
H2AX
H3C12
H2BC17
H2AC17
ZNF720
POMZP3
NCL
XRN2
CENPBD1
LEO1
RPP38
IL4I1
NUP62
ATF5
DENND6A
INTS5
EXOSC9
FTL
FSCN1
TSR3
GNPTG
BRWD1
SREK1
SECISBP2
RPS29
NAT10
CBWD3
ZNHIT2
CBWD6
ZNF598
FAU
ZBED9
WASHC2C
SBNO1
SYCE2
TECR
CD74
DNAJC9
TK2
CKLF-CMTM1
CKLF
UQCC2
GSK3B
EHD1
RCCD1
AFF1
CUL7
NAGK
KMT2E
SLC3A2
XRCC2
IFRD1
STK35
SMIM11B
SMIM11A
LSM4
ING1
RINT1
GPR137
H2BC7
H3C4
H2AC7
EMC4
DAGLB
PXK
GTF3C5
AARS2
RIPK1
DHPS
C2CD5
RCE1
FAM133B
SHCBP1
PSPC1
TMEM87A
GANC
TUBA1B
MRPL17
PWWP3A
ZNF721
PIGG
GTF3A
ZNF274
COX18
MAGOHB
CRCP
NCAPD2
MRPL51
ZNF518A
ZNF207
BAG6
APOM
PCNA
FAM83D
MRPL54
APBA3
DEPDC1B
EXOSC8
ALG5
ZNF335
WDR62
THAP8
PTMA
EIF3D
WDR5B
ZNF770
H2BC15
H2AC15
CLSPN
H2BU1
H2AW
H3-3B
SMARCE1
HAGH
FAHD1
POU2F1
CYP20A1
TMEM175
GAK
NUDCD2
HMMR
NDST2
SPATA25
NEURL2
CTSA
MCRS1
BRD2
MCUR1
SERINC5
MAP2K7
PRR30
PREB
FRG1
MTHFD2
TPCN1
DDX5
CIPC
IQCD
SEH1L
UBE2M
CHMP2A
ING5
NOL10
GBE1
STAT6
ATF4
GARS1
SRSF5
S100A13
CHTOP
TCAIM
LOC100287896
LIPT2
C6orf226
ARMC5
EPM2A
RPL3
NBEAL2
CCDC12
MAT2A
ZNF790
PPIA
TUBGCP5
IGFBP4
HYLS1
DAD1
VRK2
ZNF567
ERAP1
PDE7A
AZIN1
DENR
ANKRD54
EIF3L
DUS3L
HEXIM1
ZZEF1
CYB5D2
ZNF507
P2RY11
RAD51AP1
C12orf4
ZCWPW1
MEPCE
SPTAN1
TRIM27
RITA1
DDX54
MRPL53
CEP295
ARPC1A
DGKH
TMEM185B
CAP1
POLR2B
NOA1
SSNA1
ANAPC2
ELMO1
TBCA
SLC35F5
RPF1
C19orf48
IRF8
SH3BP5L
LSM14A
EEF2
TSPOAP1
CSE1L
PROSER3
HSPB6
HLA-DQA1
STAT1
LENG8
FARSA
CALR
ACAD9
NFYC
EIF1
EIF3B
TIMM13
MYPOP
SLC9B2
NDUFA12
AMZ2
TMEM250
TMX1
NPAS4
HTR5A
MTRNR2L2
MSH3
DHFR
XKR7
GSN
RAB14
TDRD7
IQSEC3
MTRNR2L8
CPLX2
ZNF77
NKX1-1
SMIM17
CAMTA1
LIN28A
NBPF1
ZNF555
INSM2
UTP20
CYB5R4
NUF2
ARID3B
FAM24A
NME1-NME2
NME1
KXD1
CRNKL1
CFAP61
RRP15
SLC35A4
APBB3
RBM48
PEX1
FANCD2
SERPIND1
UTP25
NAGPA
ARCN1
TIPARP
KCTD18
NUP214
RNF187
RAB37
ZMPSTE24
TRMT1
NACC1
PSMD9
HPD
MTFR2
POLR3H
AHCY
STX16
KCNH7
TMEM242
CRBN
TMEM248
YJU2
RBM19
RAB42
SUMF1
QTRT1
TRIP4
IBA57
PPT1
SPNS1
EXO1
USP35
KCTD21
DLGAP3
HPCA
SCFD2
BARHL1
WASHC5
NSMCE2
ZCCHC7
SSBP1
RTBDN
COPS7B
USP30
ZEB1
POLM
SNAP25
DHDDS
TTLL4
EIF2D
RPS19
TATDN3
NSL1
ASMTL
SLC39A3
TMEM120A
CELSR3
P4HA1
UBFD1
EARS2
TTC26
METTL1
EEF1AKMT3
TIGAR
BCL7B
MARCHF4
SMG8
VPS50
HEPACAM2
IDH3B
PWWP2A
CCNG2
ITGB3BP
EFCAB7
BIRC5
FBRS
IQGAP3
TDRKH
PDE4A
RABL2B
CYP27B1
RBBP5
SOD2
NOL8
CENPP
FAM227B
DTWD1
SPATA2
OSCAR
NDUFA3
CHGB
TMCO3
DCUN1D2
UNG
ALKBH2
TPH2
NEK2
HMGB1
IPO4
MIS18A
SPDYE14
SPDYE10P
CDK7
LARP1
LPIN1
GTPBP6
SPOP
WDR4
RTTN
BNIP3L
SARS1
SUPT7L
SLC4A1AP
BOLA2
EPHA10
SVOP
GATB
RFC1
NFE2L2
TIMM17A
SLX1B
SLX1A
BOLA2B
EIF1AD
BANF1
NUP107
NEIL3
MTF2
KAT5
TRUB2
COQ4
N6AMT1
WTAP
DNAJC5
COMMD2
CCDC59
NDUFS3
KBTBD4
POLR3F
DZANK1
HIBADH
SEC31A
PDE6D
KLHL18
KIF9
SLC12A9
RFX1
PSME3
RAD51
MAPK8IP2
SLC45A4
MRPL27
EME1
WDR36
PRRC2B
INTS12
GSTCD
RBM28
COMMD9
SF3A3
NOS3
PI16
PDE1C
COQ8A
CNOT3
CPPED1
ZFPL1
CDCA5
MRM3
GLOD4
EPN1
FBXO5
FNBP1
KIF18B
KIAA0895
UBE2L3
NRL
L1CAM
CBLL1
DHX40
CSTF1
AURKA
DRG2
THAP9
TXLNA
PAFAH2
CCNA2
SLC25A51
BOLA2-SMG1P6
NCAPH
CDK5RAP1
BIRC2
GTF3C3
ASF1A
PYY
NAGS
MFSD1
RTN4
USP2
CCDC88A
RTF2
VIM
BAIAP2
COL23A1
C6orf89
OGDH
STX18
TSFM
EBAG9
GPATCH3
VTA1
NMBR
TOMM22
C12orf66
BCAS3
SMYD5
HDAC2
AP3S2
POM121
TMEM199
POLDIP2
PEX3
ADAT2
YARS1
S100PBP
RGPD1
ZNF581
TMEM262
MRPL40
HIRA
RRP12
CRKL
USPL1
KDM3A
LRRC59
TBRG4
RBM8A
TRAPPC6A
BLOC1S3
KIF20A
BRD8
EDC3
ATR
NSUN4
USP54
RABGEF1
C16orf71
ANKS3
NOP16
HIGD2A
STAT3
ATL3
IL1R1
CCDC146
RGPD2
CCDC106
TRIAP1
GTF2H3
EIF2B1
STAM2
HUS1
YTHDF2
DCAF11
PGAM5
UTP11
ATG14
KLHL20
SFSWAP
NR1H2
PLEKHM3
TOP3B
DDX18
AANAT
UBE2O
KIAA1586
ARFGEF2
CWC25
ZNF684
CCDC86
IGF2BP3
MED23
DPY19L4
CFAP54
GOLGA7
TRMT6
MCM8
UBE3B
CKAP2L
GRWD1
MRPL44
SUPV3L1
ATG9B
ABCB8
BSDC1
KLHL32
C8orf33
AP1M1
FBXL13
ARMC10
ESCO2
HNRNPD
D2HGDH
ATP6V0D1
AGRP
OPA1
VPS37D
MTIF2
ZC3HC1
GDAP1
BLCAP
CMSS1
MTBP
MRPL13
MACC1
DYNC2I1
MRPL45
NUP35
TBC1D19
SEPTIN9
CLK3
ACVR1
AAR2
GTF3C4
DDX31
LTV1
COASY
INTS7
DTL
FAM72C
SAP30BP
RECQL5
TTC31
SASS6
RABEP2
NOL6
SNRPE
ITFG2
LSM5
FANCI
E2F6
PMVK
TMEM208
LRRC29
DHX37
BRI3BP
SGO1
SLC24A1
INTS14
GTF2H4
DZIP3
CIP2A
C5orf51
RGL1
CEP135
ZGRF1
LARP7
UFD1
CDC45
RTEL1
CFAP298-TCP10L
CFAP298
SKA3
MRPL57
PIKFYVE
CYRIB
TTC27
PGBD5
EBNA1BP2
CFAP57
ZBTB45
QTRT2
CCDC191
FAM228B
TFB2M
CNST
PFDN4
TMEM186
PMM2
RABGAP1L
PPWD1
CENPK
CACTIN
PIGU
COX16
TMEM41A
SKA1
URB1
RAB5IF
PUS10
PEX13
NUP54
RPTOR
PRCP
DDIAS
RBM42
TACO1
ZNF830
CCT6B
MRPS23
ARPC5
KLF1
TOMM40
MCM7
AP4M1
PRMT2
TEKT2
ADPRS
STMN3
P2RX6
GTPBP10
NDUFAF5
ESF1
GCDH
VPS9D1
UTP3
EXOSC5
BCKDHA
ABCB10
GPATCH4
CENPS-CORT
CENPS
PSEN2
NLE1
NUCKS1
SWSAP1
THAP7
PHOSPHO2
CCDC173
ARHGEF1
TFB1M
YIF1A
TMEM151A
GLRA1
FAM98B
CNOT4
ZNF165
NR6A1
TFPT
PRPF31
MGAT5
POLR3D
CCNL1
FAM161A
ZC3H15
WBP1
INO80B
PUM3
NMNAT1
LZIC
EIF3F
POLN
HAUS3
FXN
CDC73
ATP5F1E
CDC25B
MIS18BP1
GET3
PMS2
AIMP2
PBK
LSM12
TEFM
G6PC3
SPG21
DSCC1
DCLRE1B
AP4B1
RHEBL1
TBC1D30
MRPL21
IGHMBP2
ZCCHC14
PPIL2
ULK4
NOL7
PPP6R1
RIMBP3C
ZNF558
IREB2
TTC21B
TPM4
ZNF778
ANGPTL6
ANK1