ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11399800 | NCI-H1963
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX16386913: 293

◢ SRX3010110: A549

◢ SRX3010111: A549

◢ SRX24188777: BJ

◢ SRX24188786: BJ

◢ SRX20550182: BT67

◢ SRX20550183: BT67

◢ SRX20550184: BT67

◢ SRX20599715: Caco-2

◢ SRX20599717: Caco-2

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX10616096: GM12878

◢ SRX10616097: GM12878

◢ SRX11374678: GM12878

◢ SRX11374679: GM12878

◢ SRX3322296: GM12878

◢ SRX3322297: GM12878

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX10478224: Hep G2

◢ SRX10478225: Hep G2

◢ SRX2423815: Hep G2

◢ SRX2423816: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX2023732: iPSC derived cardiac cells

◢ SRX2023764: iPSC derived cardiac cells

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX2423402: K-562

◢ SRX2423403: K-562

◢ SRX5457481: K-562

◢ SRX5457482: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX8064823: Lymphoblastoid cell line

◢ SRX8064824: Lymphoblastoid cell line

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◣ SRX11399800: NCI-H1963

◢ SRX11399801: NCI-H1963

◢ SRX11399802: NCI-H1963

◢ SRX9779520: NCI-H1963

◢ SRX4732741: Pre-B cells

◢ SRX7981741: Prostate cancer

◢ SRX7981742: Prostate cancer

◢ SRX7981743: Prostate cancer

◢ SRX7981744: Prostate cancer

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX9562892: RH-4

◢ SRX9562897: RH-4

◢ SRX19212560: SK-N-MC

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

MTRNR2L1
PPT1
ZMPSTE24
ZNF684
CAP1
MBIP
SKA1
PPIE
TRIT1
EXO5
UTP20
RPH3A
RLF
ARHGEF2
MRPL45
RABL2B
RPS29
HPCAL4
TRMT1
NACC1
IQGAP3
NT5C1A
CDK7
MYCL
SHCBP1
SSH2
CRNKL1
CFAP61
RAD51
QTRT1
NUF2
FAM161A
PPBP
PF4
GCNT2
MFSD2A
TRAPPC6A
BLOC1S3
DHX37
BRI3BP
POLR3D
UTP25
NCAPH
C12orf66
DIAPH3
BMP8B
WDR7
ATP6V0D1
AGRP
NBN
FRG2C
ADAT1
MOK
ZP4
PAX9
GRWD1
PSME3
RTTN
HSPA12A
ENO4
MTFR2
SEMA3C
SPACA1
PMAIP1
LAMP1
TRMT61A
MAB21L2
RRP15
COX8C
C16orf71
ANKS3
HEATR1
BIRC5
DZIP3
CIP2A
GPATCH4
ZNF24
WDR4
AP1S1
PUM3
NBPF1
TIMM21
FBXO15
SPATA25
NEURL2
CTSA
SLF2
ATP5F1A
CDC20
CFAP299
CORO2A
BLM
CCDC102B
TMX3
EXO1
PHB2
ACVR1
FANCI
RIOK3
CDC16
ZCCHC7
SRCAP
LOC730183
FBXO5
UFD1
CDC45
KIF23
RBKS
BABAM2
SCFD2
FAM72C
KPNA2
URB1
UNG
ALKBH2
KIF2C
ZGRF1
LARP7
LYPLAL1
SMYD5
PNO1
COMMD6
UCHL3
METTL11B
DPH1
RTN4RL1
UTP4
DERPC
CHTF8
AURKB
TMEM241
TICRR
MOCS2
MIS18A
APRT
KATNAL2
DMAC1
LYRM4
FARS2
WWP2
MAGI1
TTK
AEN
PLEKHD1
RBM19
FAM200B
EDC3
GTF3C4
DDX31
IFNG
TRAPPC8
VPS4B
CKAP2L
METTL1
EEF1AKMT3
CYP27B1
BOLA2
SLX1B
SLX1A
BOLA2B
BOLA2-SMG1P6
NOL6
SULT1A4
SULT1A3
ST6GALNAC1
HDHD2
POU2F1
TOM1
WDR26
ZNF77
NEK2
TTC27
CD46
TFB2M
CNST
CCT2
NPC1
SLC25A17
CENPS-CORT
CENPS
CFAP53
CCNA2
PRR3
GNL1
FBXW9
MZT1
BORA
RPRD1A
PRLHR
NUDT2
KIF24
ARMC2
RBBP8
COMMD4
TAF13
AIP
CYP21A2
CKS2
RNF125
CCNG2
USP37
CNOT9
TMEM186
PMM2
TRAPPC2L
GALNS
VPS33A
RDH5
BLOC1S1
ITGA7
ATL3
LRRC49
THAP10
NKX2-1
MRPL1
HEXA
CEP135
IKBKB
COL9A2
DSEL
USP2
MYDGF
TAF4B
KIAA0895
ANLN
GBA
PPP1R3B
FAAP24
CEP89
MRPS18B
KAT5
PIK3C3
TIMELESS
NTPCR
RETNLB
MRM3
GLOD4
KIF22
AP1B1
MRPS33
TBC1D4
WASHC5
NSMCE2
STAM2
MCM10
RPS3A
CCDC86
DDX5
SLC35D1
PEX19
NTAQ1
CLSPN
STK36
RNF25
CYB5R1
PCCA
ZNF558
MCRS1
TFAP2A
VPS41
TROAP
TIMM9
KIAA0586
ZNF408
ARHGAP1
CYB5R4
E2F3
FAM183A
SLC38A8
SH3KBP1
CCNB1
RNF138
BCAS3
PMS2
AIMP2
WDR61
POLR1B
DPH2
ATP6V0B
CRISPLD1
PMVK
TMCO3
DCUN1D2
ADPGK
SLC39A6
CDK18
SLC12A9
ZFPL1
CDCA5
TMEM262
CLK3
ZNF778
POLR2J2
LRATD2
RBL2
TOMM70
LNP1
H1-2
NKX2-8
NAT10
C16orf46
HNRNPU
SRGAP2B
FAM72D
SUGP2
ARMC6
ADSL
ESCO2
QTRT2
CCDC191
POLQ
RFX5
NCAPD3
VPS26B
RFWD3
NME7
BLZF1
HUS1
RPS27L
INTS9
HMBOX1
PTPRD
RMC1
TRIP4
SHC1
CKS1B
DDX19A
METTL18
C1orf112
PDP2
MRPL27
EME1
SPG7
CLYBL
MAK16
HROB
SECISBP2
STK11IP
TBC1D16
CCDC40
C6orf89
PBK
SRGAP2C
FAM72B
SMC2
MBD1
SLC25A6
MTRNR2L2
MSH3
DHFR
NOC3L
WDR74
TAF6L
NOL10
KIAA0513
PTPN4
VPS11
CENPH
SFXN2
ARL3
CDC25B
UPF3A
CLN5
KIF18B
SPG21
HSPBP1
BRSK1
ING5
WDR3
GDAP2
PIBF1
DIS3
TDO2
RPTOR
TCF4
DLGAP5
RPUSD4
FAM118B
ZBTB37
CCDC146
FAM161B
COQ6
ARL13B
TAF1A
TFIP11
WDR18
ASPM
NOB1
USP35
KCTD21
GLE1
VTI1B
DIRAS2
EBNA1BP2
CFAP57
DHODH
CHRNA9
PSEN2
GPX4
MYBBP1A
PDE4B
DCUN1D1
MCOLN1
ERCC5
PIF1
LEMD3
ZNF594
EFCAB6
DDHD1
RNF187
PSMD9
HPD
NUP35
SPNS1
PWP1
GEMIN6
CCDC39
MRPS28
ZNF598
PIPOX
F11R
KNL1
THADA
SCRN3
CIR1
STAP2
TXNL4B
DHX38
MPND
HASPIN
SF3A3
SGO2
UQCRC2
RCL1
ESPL1
RPL17-C18orf32
RPL17
C18orf32
COMMD5
MFSD1
TBC1D30
IPO11
GNS
FKBP1A
RPUSD2
CCDC32
KIF14
DUX4
RRP12
UTP11
RPP40
PACRGL
CRYBG3
LHFPL1
RFC1
RIOK1
CAGE1
PPIH
GAR1
CENPN
PPIB
CXXC1
SASS6
POLN
HAUS3
PISD
GTSE1
PRPF38A
ORC1
LACTB
CALHM4
DHX40
CASP7
ERCC3
RASL11B
ARID3B
MTR
MRPL24
TTC23L
TM9SF1
TAF1C
ADAD2
CNDP2
IER3IP1
RGS8
GNB3
TMEM208
LRRC29
STYXL1
VAC14
DYRK1B
NOP9
DHRS1
KLHDC4
DYRK3
ZNF396
TRUB2
COQ4
TXLNA
PRCP
DDIAS
TEKT2
ADPRS
WDPCP
MDH1
SMG5
TMEM79
MND1
ISG20
SP4
DHDDS
CHST12
SPCS1
GLT8D1
YIPF3
POLR1C
ZSCAN30
SRD5A1
ACADM
MCM5
TSTD1
SWSAP1
RRS1
ADHFE1
TOP3A
SMCR8
SCNM1
LYSMD1
TWNK
MRPL43
TSACC
CCT3
DGKB
SMAD2
PIGU
POP7
IREB2
RNF166
PDE11A
CTU2
ZNF202
RPF2
MELK
SPATA4
SLC35A4
APBB3
TSC22D4
NYAP1
RANBP6
COQ9
CIAPIN1
TRAF5
GATB
CARS2
WDHD1
SOCS4
NPL
PDE8A
AP2S1
ANAPC7
PDCD2L
CNPY3
NEMP1
GRAMD2A
CEP295
PCNT
C21orf58
ARFGAP2
MAP11
SSR2
ZNF587
LRRN3
CCNB2
MDN1
TMEM9B
RNH1
ENOX2
SNRPA
C19orf54
FAM98B
CDIP1
TTF2
RNF40
CCDC189
UBE2C
ATP6V0A1
MAPRE2
CRELD2
ALG12
EHMT1
IPO4
NUP107
WDR46
PFDN6
LMNA
DIMT1
MED20
BYSL
INPP5K
MEX3A
TMEM260
GALNT1
TRMT6
MCM8
PIK3CA
RSPH14
RAB36
NIP7
COG8
BAZ1B
FAM234B
SENP7
POLR2J3
KXD1
WDR62
THAP8
NSFL1C
DNMT3B
SOCS3
ST8SIA3
E2F6
XRN2
EIF3C
EIF3CL
SLF1
KIAA0825
INO80
TMEM234
EIF3I
DAD1
ZSCAN29
TUBGCP4
DPP4
SLC14A1
FBXW8
TMED5
CCDC18
PRIM2
ABHD3
PPP1R14D
GPATCH3
SLC7A6OS
PRMT7
FBXO43
ATF3
POLR2K
PIGO
GFUS
SNX19
SF3B4
PARP9
DTX3L
SCG5
UBE2Q1
ACOX3
ACTR6
SLC35F5
FCF1
AREL1
MRPL12
KIZ
NCKAP5L
VPS9D1
EXOSC5
BCKDHA
SERP1
EIF2A
RSPH3
CFDP1
DOLPP1
NUDT1
MRM2
ORC2
RAVER1
SMYD3
RCCD1
ACYP1
ZWILCH
RPL4
PFDN2
NIT1
ZC2HC1C
SLC35A3
SCAMP3
CEP128
SDE2
LRP2BP
ANKRD37
INO80C
C18orf21
SLC35B2
GINS3
DENR
ARL2BP
GOLPH3L
PHLPP2
MLN
NAGPA
VPS35
CDK5RAP3
CEP162
SZT2
MED8
NCAPH2
LMF2
TPGS2
MRM1
DTX2
BAG4
GPR107
CHAC1
LSM1
POLD1
GPN1
CCDC121
BRCA1
GNL2
ZNF33A
PDF
RTF1
FBL
TMEM178A
BAG6
APOM
VPS45
S100A13
PPIL1
TK1
CHTOP
PCID2
CUL4A
TTC5
EIF3D
SLC38A7
EIF2AK1
RASAL2
IBA57
COMMD9
COG2
PPP1R12B
PLK4
SF3A1
CCDC157
PTCD2
MRPS27
PYGO2
LOC101928120
RIT1
HEG1
SPATA2
DPY19L4
LTV1
PLS1
ZNF721
PIGG
PTRHD1
CENPO
NUDT9
DDX19B
VPS72
DYNLL1
MUL1
CEP126
ANGPTL5
TIGD4
ARFIP1
SPATA33
WDR5B
BCL7A
DNAH14
MVD
ZNF473
VRK3
MTHFR
NOLC1
CLCN6
TTI1
RPRD1B
RBM7
C11orf71
NCAPG
EXOC1
SMIM5
ASH1L
HNRNPH2
GTF2H3
EIF2B1
ZCCHC14
DBF4B
SPAG1
DUS2
DDX28
PPIL3
NIF3L1
GINS1
USP36
ABCA3
CFAP206
OGDH
KLHL20
KLF1
GCDH
MRPS18C
HELQ
EXOSC3
NASP
POLD3
THAP5
DNAJB9
CYB5A
TTC39C
ZZEF1
CYB5D2
ASB8
PSMB4
LAP3
NCOA7
STAT1
EIF2B3
NOM1
SRP54
SMC4
IFT80
TIPRL
CEP43
VPS8
POLA2
FUBP3
LMAN1
ZNF701
EPYC
NAGK
RECQL
GOLT1B
RAB5B
URB2
TAF5L
SNAP47
JMJD4
HJURP
SLC25A44
EIF4A1
TK2
CKLF-CMTM1
CKLF
MED25
FUZ
MCF2L
CFAP54
BUB1B
ADAR
DHX33
RHNO1
FOXM1
IQCG
TIPIN
TXNL4A
RBFA
IGSF9
LMLN
ZBBX
TMEM147
NF2
LAMA3
KLF5
RAB23
ANGPTL6
LTN1
AAAS
PPAN-P2RY11
PPAN
STOML2
SPTY2D1
CNPY2
COA3
CNTD1
MXD3
TONSL
FKBP3
FANCM
ARIH1
KLC2
P2RY11
ZCWPW1
MEPCE
CENPF
LRRC57
HAUS2
IPO9
SERPINB4
MAD2L1
KMT2D
PIGW
MYO19
ZNF507
COX19
JAM3
EIF2D
CCDC59
CDC73
RBL1
NOC4L
DDX51
PRRT1
PPT2
CCZ1B
NDFIP2
ZNF669
ZBTB7C
GRHL3
BOLA1
EHD3
CAPN14
NUP214
NDUFAF5
ESF1
WBP1
INO80B
SHOX2
RSRC1
CDC6
NDUFB3
FAM126B
PARPBP
NUP37
SAXO2
EFL1
SETD4
XPO5
POLH
CHCHD3
MEA1
MRI1
KLHDC3
IFT57
CENPA
HYKK
CIART
ARMCX5-GPRASP2
ARMCX5
LY75-CD302
LY75
NEIL3
TMEM41A
RANGAP1
L3HYPDH
JKAMP
CWF19L1
SNRPD2
QPCTL
TEPSIN
NDUFAF8
VPS53
OXR1
TMEM231
E2F2
AIFM1
ZNF319
USB1
LAGE3
EML5
POLR3H
FARSA
CALR
MIA3
BRAP
ACAD10
AKR1A1
SLC35C2
EDC4
PIMREG
MRE11
ANKRD49
DPH5
BLOC1S2
POLR2C
MAD1L1
FBXO25
ZNF223
BLMH
ACAA2
C2orf42
VPS26C
ECSIT
KCTD9
CDCA2
CDT1
EEF1AKNMT
VPS37A
CNOT7
CTNS
SHPK
SLC30A5
POLL
DPCD
NDUFAF2
ERCC8
ZNF133
WDR90
STRIP1