ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX116423 | K-562
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX16386913: 293

◢ SRX3010110: A549

◢ SRX3010111: A549

◢ SRX24188777: BJ

◢ SRX24188786: BJ

◢ SRX20550182: BT67

◢ SRX20550183: BT67

◢ SRX20550184: BT67

◢ SRX20599715: Caco-2

◢ SRX20599717: Caco-2

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX10616096: GM12878

◢ SRX10616097: GM12878

◢ SRX11374678: GM12878

◢ SRX11374679: GM12878

◢ SRX3322296: GM12878

◢ SRX3322297: GM12878

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX10478224: Hep G2

◢ SRX10478225: Hep G2

◢ SRX2423815: Hep G2

◢ SRX2423816: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX2023732: iPSC derived cardiac cells

◢ SRX2023764: iPSC derived cardiac cells

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX100516: K-562

◣ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX2423402: K-562

◢ SRX2423403: K-562

◢ SRX5457481: K-562

◢ SRX5457482: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX8064823: Lymphoblastoid cell line

◢ SRX8064824: Lymphoblastoid cell line

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX11399800: NCI-H1963

◢ SRX11399801: NCI-H1963

◢ SRX11399802: NCI-H1963

◢ SRX9779520: NCI-H1963

◢ SRX4732741: Pre-B cells

◢ SRX7981741: Prostate cancer

◢ SRX7981742: Prostate cancer

◢ SRX7981743: Prostate cancer

◢ SRX7981744: Prostate cancer

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX9562892: RH-4

◢ SRX9562897: RH-4

◢ SRX19212560: SK-N-MC

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

NPAS4
HTR5A
MTRNR2L2
MSH3
DHFR
LIN28A
MTRNR2L8
NBPF1
IQSEC3
RBM48
PEX1
ZCWPW1
MEPCE
EPN1
NKX1-1
FAM24A
INSM2
MTRNR2L1
NUP214
PYY
NAGS
CYB5R4
XKR7
FRG2
NAGPA
ZCCHC7
PDE4A
SPOP
DIO1
NOS3
IBA57
RTBDN
AANAT
UBE2O
NPPB
TJP3
EPHA10
UTP20
GET3
GPATCH3
XKR9
LACTB2
SMIM17
LCN8
CELSR3
KCNH7
SPNS1
EIF2D
LPIN1
PKD2L2
RNF187
PDE1C
GBA
ZNF335
TTC26
CPPED1
DPF1
PIN1
TTC9B
RBM19
SUMF1
DHX40
DLGAP3
SMG8
TMEM204
TMED1
NACAD
CRBN
HPCA
ATL3
UTP25
RFC1
NCLN
CACNG3
ADAMTS14
KLHL18
KIF9
RGPD1
RGPD2
DRD2
TRMO
OSCAR
NDUFA3
CELF6
PICK1
B3GNT3
RAP1GAP
SCG3
DPH2
TCIRG1
SYMPK
FOXA3
DIABLO
UBE3B
CEACAM16
CRKL
KPNB1
NSUN5
DNAAF3
PRAME
ANK1
SETD1A
MICAL3
PPP1R7
PASK
CPLX2
RIPOR1
NUF2
P2RX6
EBI3
HEXA
GTPBP6
UBE2L3
PRG3
SYT11
GON4L
CAPN2
UTP11
RSPH14
RAB36
LSR
STEAP1B
DUX4
ZC3HC1
VPS50
HEPACAM2
CDK5RAP3
RXRA
PPM1F
NBPF3
UFD1
CDC45
PAFAH2
QTRT1
HAGH
FAHD1
DNAJC11
TKT
ZDHHC24
ACTN3
EVI5
MEGF9
CHGB
FNBP1
SLC29A3
CAMTA1
TRMT1
NACC1
THAP7
RTL10
GNB1L
ZNF280D
N6AMT1
NRCAM
TIGAR
EIF3H
AP3B2
BARHL1
RFX1
COL23A1
POLE4
RAB42
BOLA2
SLX1B
SLX1A
BOLA2B
BOLA2-SMG1P6
VPS37C
TIMM10
CCDC116
PRKCSH
CCDC151
TRIP4
ATG14
DNAJC18
RAB40B
SARS1
GADD45B
FCHO1
CALB1
LCLAT1
SFSWAP
TOP3B
COASY
SOGA1
IDH3B
MARCHF8
CDC42BPG
WASHC2C
CENPS-CORT
CENPS
SNRNP25
POLR3K
PDE4C
POLD3
ADGRB2
TSEN54
CASKIN2
TMEM242
PRRT1
PPT2
COA7
TIFAB
EIF4EBP1
TASOR
BAIAP3
NRROS
TTC7A
MCFD2
CYP21A2
EXO1
VPS37D
RPS13
RARG
RPA2
KTI12
HSH2D
MRPL40
HIRA
USP54
COMMD9
CPNE9
C8orf33
UBN2
SPATA2
EGLN1
MOCS3
DPM1
AATF
KAT2B
QKI
XYLB
VWA7
CCDC69
GNB4
TK2
CKLF-CMTM1
CKLF
PI16
HMGN2
FAM217B
TLCD3B
SYCP2
MICALL2
EPC2
ALDH4A1
SCRT2
FRG2C
GSN
RAB14
TDRD7
ZNF77
ZNF555
ARID3B
POLR2J3
PAXBP1
NME1-NME2
NME1
KXD1
NDUFS7
CRNKL1
CFAP61
RRP15
SLC35A4
APBB3
CCDC200
FANCD2
SERPIND1
ARCN1
TIPARP
KCTD18
RAB37
ZMPSTE24
SPATA25
NEURL2
CTSA
PSMD9
HPD
MTFR2
CCDC107
POLR3H
AHCY
STX16
LAMP1
VPS33A
TMEM248
YJU2
WASHC2A
PPT1
USP35
KCTD21
WDR74
SCFD2
WASHC5
NSMCE2
SSBP1
COPS7B
USP30
ZEB1
POLM
SNAP25
DHDDS
TTLL4
RPS19
TATDN3
NSL1
ASMTL
SLC39A3
TMEM120A
P4HA1
FARSA
CALR
UBFD1
EARS2
KNL1
METTL1
EEF1AKMT3
BCL7B
MARCHF4
PWWP2A
CCNG2
ITGB3BP
EFCAB7
BIRC5
FBRS
IQGAP3
GSTA4
TDRKH
CDKN1A
RABL2B
CYP27B1
RBBP5
SOD2
NOL8
CENPP
FAM227B
DTWD1
TMCO3
DCUN1D2
UNG
ALKBH2
TPH2
NEK2
HMGB1
IPO4
MIS18A
SPDYE14
SPDYE10P
CDK7
LARP1
RPS29
WDR4
RTTN
BNIP3L
SUPT7L
SLC4A1AP
SVOP
GATB
NFE2L2
TIMM17A
EIF1AD
BANF1
NUP107
NEIL3
MTF2
KAT5
TRUB2
COQ4
WTAP
DNAJC5
COMMD2
CCDC59
NDUFS3
KBTBD4
POLR3F
DZANK1
HIBADH
RDH5
BLOC1S1
SEC31A
PDE6D
SLC12A9
PSME3
RAD51
MAPK8IP2
SLC45A4
MRPL27
EME1
WDR36
PRRC2B
INTS12
GSTCD
RBM28
SF3A3
COMMD4
CASC3
COQ8A
CNOT3
ZFPL1
CDCA5
MRM3
GLOD4
FBXO5
LUC7L2
KIF18B
KIAA0895
NRL
H4C8
NUDT15
L1CAM
CBLL1
CSTF1
AURKA
ITGA7
DRG2
THAP9
TXLNA
CCNA2
SLC25A51
NCAPH
CDK5RAP1
BIRC2
GTF3C3
ASF1A
MFSD1
RTN4
USP2
CCDC88A
RTF2
VIM
BAIAP2
C6orf89
CCDC115
OGDH
STX18
TSFM
EBAG9
VTA1
NMBR
TOMM22
C12orf66
BCAS3
SMYD5
HDAC2
AP3S2
POM121
TMEM199
POLDIP2
CRYAA2
CRYAA
POLG
PEX3
ADAT2
YARS1
S100PBP
ZNF581
TMEM262
H4C15
H4C14
RRP12
USPL1
KDM3A
LRRC59
TBRG4
RBM8A
TRAPPC6A
BLOC1S3
KIF20A
BRD8
EDC3
ATR
NSUN4
RABGEF1
C16orf71
ANKS3
NOP16
HIGD2A
STAT3
IL1R1
CCDC146
CCDC106
TRIAP1
GTF2H3
EIF2B1
STAM2
HUS1
YTHDF2
DCAF11
PGAM5
KLHL20
NR1H2
PLEKHM3
DDX18
KIAA1586
ARFGEF2
CWC25
ZNF684
CCDC86
IGF2BP3
MED23
DPY19L4
CFAP54
NAGK
GOLGA7
TRMT6
MCM8
SSNA1
ANAPC2
POLR3B
CKAP2L
GRWD1
MRPL44
SUPV3L1
ATG9B
ABCB8
BSDC1
KLHL32
C8orf37
AP1M1
FBXL13
ARMC10
TSR3
GNPTG
ESCO2
HNRNPD
POLR3E
D2HGDH
ATP6V0D1
AGRP
OPA1
TMEM259
MTIF2
GDAP1
BLCAP
CMSS1
MTBP
MRPL13
MACC1
DYNC2I1
MRPL45
NUP35
TBC1D19
SEPTIN9
CLK3
ACVR1
AAR2
GTF3C4
DDX31
LTV1
NBN
INTS7
DTL
FAM72C
SAP30BP
RECQL5
TTC31
SASS6
RABEP2
B4GAT1
NOL6
SNRPE
ITFG2
LSM5
FANCI
E2F6
PMVK
TMEM208
LRRC29
DHX37
BRI3BP
SGO1
SLC24A1
INTS14
GTF2H4
DZIP3
CIP2A
C5orf51
RGL1
CEP135
ZGRF1
LARP7
RTEL1
CFAP298-TCP10L
CFAP298
SKA3
MRPL57
PIKFYVE
CYRIB
TTC27
PGBD5
EBNA1BP2
CFAP57
ZBTB45
QTRT2
CCDC191
FAM228B
TFB2M
CNST
PFDN4
TMEM186
PMM2
RABGAP1L
PPWD1
CENPK
CACTIN
PIGU
COX16
TMEM41A
SKA1
FMC1-LUC7L2
FMC1
BRMS1
URB1
RAB5IF
NAT10
PUS10
PEX13
NUP54
RPTOR
PRCP
DDIAS
DNAJC25-GNG10
DNAJC25
RBM42
TACO1
ZNF830
CCT6B
MRPS23
ARPC5
KLF1
TOMM40
MCM7
AP4M1
PRMT2
TEKT2
ADPRS
STMN3
GTPBP10
NDUFAF5
ESF1
GCDH
VPS9D1
UTP3
EXOSC5
BCKDHA
ABCB10
GPATCH4
PSEN2
XRCC2
NLE1
NUCKS1
SWSAP1
WDR62
THAP8
PHOSPHO2
CCDC173
ARHGEF1
TFB1M
YIF1A
TMEM151A
GLRA1
FAM98B
CNOT4
ZNF165
PCIF1
NR6A1
TFPT
PRPF31
POC5
MGAT5
POLR3D
CCNL1
FAM161A
ZC3H15
WBP1
INO80B
PUM3
NMNAT1
LZIC
SECISBP2
EIF3F
POLN
HAUS3
NCOA7
SACM1L
SIRT4
FXN
CDC73
ATP5F1E
CDC25B
MIS18BP1
PMS2
AIMP2
PBK
LSM12
TEFM
G6PC3
SPG21
FAM133B
DSCC1
DCLRE1B
AP4B1
RAB11A
RHEBL1
TBC1D30
MRPL21
IGHMBP2
ZCCHC14
PPIL2
ULK4
NOL7
PPP6R1
RIMBP3C
ZNF558
IREB2
TTC21B
TPM4
ZNF778
ANGPTL6
SNX16
SF3B6
RNF166
PNO1
RBKS
MRPS15
BABAM2
CCNB1
LZTR1
ING3
RRM2
MRPS33
PAK1IP1
HEATR1
C6orf52
WDR46
PFDN6
RRS1
ADHFE1
SELENOH
SHOX2
RSRC1
TIGD1
EIF4E2
MMAA
ADNP
DDX41
ANLN
C2orf42
SMIM12
RPAP3
GATAD2A
SEC13
PDE11A
BNIP1
CENPF
PARL
CCDC142
STAT1
BAG6
APOM
UBE2Q1
CFAP299
ZKSCAN8
MRPS35
DCT
DUS2
DDX28
RPS27L
LRP2BP
SPAAR
INTS5
VPS26C
KIF15
KIAA1143
VPS35
MRPS18C
HELQ
TSN
ZAR1L
BRCA2
TBP
PSMB1
MRPL48
DPP9
ACVR2A
AURKB
ECSIT
LRRC37A3
CBWD5
GTF3C5
SRSF11
DSTYK
RIMBP3B
METTL15
KIF18A
ESYT2
MRPL1
AGBL3
TFIP11
PSMD3
ATAD2
ACOX3
CCT2
VPS29
RAD9B
TMEM222
KCTD9
CDCA2
TRMT61B
TAF13
SYNJ1
NTAQ1
MRPL39
GFM1
E2F1
ANKRD12
RPS7
ARHGDIA
TOP3A
SMCR8
RPP25
PFKM
SLC35B1
PHF19
CORO1C
TAMM41
KYAT1
IPO11
RUBCN
PIH1D2
NKAPD1
MITD1
EIF2B3
GCLC
WDR11
PTPRF
PRMT5
RUVBL1
DCAF10
PPIP5K2
GIN1
ANKRD37
TMEM181
RLF
RBL1
RPL27
WDPCP
DDIT4
PTPN4
FBXO48
CAP1
APLF
PCNA
ZP3
H6PD
STYXL1
PLS1
ABCB6
TAF6L
YBEY
PDRG1
MCM3AP
SHC1
CKS1B
IMP4
SUGCT
MPLKIP
NSA2
GFM2
BOD1
PGK1
ZSCAN22
MIA3
MLX
ZNF473
VRK3
KDM2A
SLC44A1
SLC33A1
SMN2
SMN1
CLUAP1
ZNRD2
TROAP
FAM89B
TXNDC9
EIF5B
AP5Z1
NOL10
INHA
SKIV2L
NELFE
PSMF1
INO80C
FAM207A
LRRC49
RAD54L
DDX21
TEX46
KDM1A
CDC6
OXNAD1
DPH3
CTU2
CHST12
HCFC2
GLT8D2
SRRD
HPS4
NEU1
HBP1
OIP5
NUSAP1
ERMN
HDAC11
CTPS1
XRN2
NADK2
KLHL12
GRN
VPS45
TICRR
MDH1
FBXW8
HSD17B8
TIMM9
KIF2C
KIAA0586
AARS2
ZNF398
PALB2
DCTN5
CDT1
RPP40
SNRPC
LSG1
LTA4H
RIOK1
CAGE1
RC3H2
BUB1B
WFDC3
POU2F1
DNTTIP1
DPH1
SNRPB2
RNASE4
NUP155
NFIB
ANG
PARP2
SMG7
PIGBOS1
PIGB
INKA2
SH2B1
FAM98A
COG2
DIP2A
SNX17
EIF2B4
HIP1
CZIB
RTN4RL1
THAP10
RAD51AP1
C12orf4
ATG5
C16orf46
NOC3L
SGO2
STBD1
MBIP
CAND1
AVL9
TCF4
SEC11A
TTK
C2CD5
RAPGEF6
H4C3
H1-6
SHQ1
TCP11L2
UGGT1
DUS3L
MAN2C1
SPHK2
NUDT2
PRDM11
NUP42
GALK2
IFNAR1
GTF2H2C_2
LMNA
C16orf90
BCAR3
SCNM1
LYSMD1
VPS11