ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3010110 | A549
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX16386913: 293

◣ SRX3010110: A549

◢ SRX3010111: A549

◢ SRX24188777: BJ

◢ SRX24188786: BJ

◢ SRX20550182: BT67

◢ SRX20550183: BT67

◢ SRX20550184: BT67

◢ SRX20599715: Caco-2

◢ SRX20599717: Caco-2

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX10616096: GM12878

◢ SRX10616097: GM12878

◢ SRX11374678: GM12878

◢ SRX11374679: GM12878

◢ SRX3322296: GM12878

◢ SRX3322297: GM12878

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX10478224: Hep G2

◢ SRX10478225: Hep G2

◢ SRX2423815: Hep G2

◢ SRX2423816: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX2023732: iPSC derived cardiac cells

◢ SRX2023764: iPSC derived cardiac cells

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX2423402: K-562

◢ SRX2423403: K-562

◢ SRX5457481: K-562

◢ SRX5457482: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX8064823: Lymphoblastoid cell line

◢ SRX8064824: Lymphoblastoid cell line

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX11399800: NCI-H1963

◢ SRX11399801: NCI-H1963

◢ SRX11399802: NCI-H1963

◢ SRX9779520: NCI-H1963

◢ SRX4732741: Pre-B cells

◢ SRX7981741: Prostate cancer

◢ SRX7981742: Prostate cancer

◢ SRX7981743: Prostate cancer

◢ SRX7981744: Prostate cancer

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX9562892: RH-4

◢ SRX9562897: RH-4

◢ SRX19212560: SK-N-MC

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

EPN1
MTRNR2L1
SNX16
MTRNR2L2
MSH3
DHFR
MTRNR2L8
DUX4
FRG2C
NAGPA
UBE3B
VPS37D
PPWD1
CENPK
IFNAR1
FRG2
MRM3
GLOD4
ZNF830
CCT6B
GTF3C5
SGSM1
SFSWAP
SAP30BP
RECQL5
ATG14
RFX1
TIMM9
KIAA0586
OSCAR
NDUFA3
ATG16L1
NR6A1
EOMES
TOP3A
SMCR8
COPS7B
TACR1
NPAS4
PIGBOS1
PIGB
ARHGAP45
CENPM
SMG8
TMEM199
POLDIP2
IDH3B
BIRC5
COL23A1
CDK1
ITGB3
DRG2
TMEM101
C8orf33
CRBN
PDLIM7
MAPT
NCAPH
ESCO2
NUF2
SUSD5
PAK4
CPPED1
RRM2
ZNF335
DZIP3
CIP2A
RTN4RL1
PITPNM1
HAGH
FAHD1
GRWD1
ZCCHC14
EIF2D
DDX23
PSMB7
CHST12
IL3RA
CYRIB
PLK4
ZFPL1
CDCA5
FAM78B
UBFD1
EARS2
POLQ
NEK2
PELP1
DIO3
PSMD9
HPD
U2SURP
MED6
SUMF1
NAE1
SFRP5
LHX4
HOXA3
HOXA7
AHCY
MED24
KIF20A
BRD8
TOMM22
NUCKS1
KITLG
SPNS1
FXN
SEMA4B
TCTN2
SYNJ2
SLC47A1
NGDN
ZNF331
NUDT8
CYLD
PTPRA
GET3
SLC29A3
SRP68
GALR2
ZACN
NEUROD2
IQGAP3
TIMM22
C1QTNF6
TICRR
FANCD2
CACTIN
BRCA1
YEATS4
TRIM26
EXO1
DIO1
NEFL
TRMT1
NACC1
NOM1
DEPDC1
STK25
PRCP
DDIAS
SLC27A2
PAX4
SWSAP1
TSEN54
CASKIN2
SSH1
ZGRF1
LARP7
SOGA1
ERAL1
PEPD
VPS50
HEPACAM2
CDC6
CDC25C
FFAR4
SPOP
TTC31
RPTOR
CCDC142
TSR1
SGSM2
NPPC
COMMD9
SGO1
PRKCQ
UTP20
MTBP
MRPL13
VIRMA
CCDC22
CACNA1F
SF3B3
COG4
C1QTNF8
SPATA25
NEURL2
CTSA
SETD1A
PCP2
XAB2
NR2C1
KXD1
WASHC2C
USP35
KCTD21
ERICH4
DMAC2
ELAVL3
GPATCH3
TROAP
ETFB
SMPD4
MZT2B
CCNA2
TFPT
PRPF31
UBE2Q1
RAD18
NLRX1
PBK
TKT
KIF16B
ZCCHC7
COASY
SKA1
GTSE1
RBM42
SLC38A10
ELP5
CTDNEP1
TRAPPC2L
GALNS
FANCI
MRPS35
SGO2
SPTBN4
BLVRB
MRPL45
MRPS15
CENPF
FAM111A
ZDHHC24
ACTN3
POC1A
METTL14
PLD3
C19orf47
RBM48
PEX1
TTK
PPIL4
RAD54B
P2RY1
LDLRAP1
FAM162A
CCDC58
ATP5MF-PTCD1
ATP5MF
TMC8
TMC6
TRIP4
EIF3F
STIL
AANAT
UBE2O
ZC3HC1
FAM72C
C20orf204
IRF2BP1
IQGAP2
RPUSD4
FAM118B
RNF130
DNMT3A
FBXL19
ATAD5
RBM19
SPATA2
CSF3R
ABCC3
ZCWPW1
MEPCE
NTAN1
TCIRG1
POFUT1
PLAGL2
LARS2
SPX
ARHGEF1
TTC38
PKDREJ
RAB20
RRP15
WDR74
PPT1
AURKB
SPHK2
SRGAP2B
FAM72D
RPL18
FAM83E
MEIS1
TMEM242
GATB
EIF3H
FGF18
VSTM2L
CFAP73
SHCBP1
SH3PXD2B
LPIN1
ASPM
KANK2
CSTF2
CASTOR1
POLR3F
DZANK1
MRPS7
GGA3
HOXD11
DSCC1
GTF3C3
KPNA2
MTFR2
ZNRD2
FAM89B
PGPEP1
EHBP1L1
ADA
TCF3
CDON
BRAP
ACAD10
CYB5B
NUP160
TSR2
HTR5A
XKR7
GSN
RAB14
TDRD7
IQSEC3
CPLX2
ZNF77
NKX1-1
GBA
SMIM17
CAMTA1
LIN28A
NBPF1
ZNF555
INSM2
CYB5R4
ARID3B
FAM24A
POLR2J3
PAXBP1
NME1-NME2
NME1
NDUFS7
CRNKL1
CFAP61
SLC35A4
APBB3
CCDC200
SERPIND1
UTP25
ARCN1
TIPARP
KCTD18
NUP214
HEXA
RNF187
RAB37
ZMPSTE24
CCDC107
POLR3H
STX16
KCNH7
LAMP1
VPS33A
TMEM248
YJU2
WASHC2A
RAB42
QTRT1
IBA57
DLGAP3
HPCA
SCFD2
BARHL1
WASHC5
NSMCE2
SSBP1
RTBDN
USP30
ZEB1
POLM
SNAP25
DHDDS
TTLL4
RPS19
TATDN3
NSL1
ASMTL
SLC39A3
TMEM120A
CELSR3
P4HA1
TRMO
FARSA
CALR
TTC26
KNL1
METTL1
EEF1AKMT3
TIGAR
BCL7B
MARCHF4
PWWP2A
CCNG2
ITGB3BP
EFCAB7
FBRS
GSTA4
TDRKH
CDKN1A
PDE4A
RABL2B
CYP27B1
RBBP5
SOD2
NOL8
CENPP
FAM227B
DTWD1
CHGB
TMCO3
DCUN1D2
UNG
ALKBH2
TPH2
HMGB1
IPO4
MIS18A
SPDYE14
SPDYE10P
CDK7
LARP1
RPS29
GTPBP6
WDR4
RTTN
BNIP3L
SARS1
SUPT7L
SLC4A1AP
BOLA2
EPHA10
SVOP
RFC1
NFE2L2
TIMM17A
SLX1B
SLX1A
BOLA2B
EIF1AD
BANF1
NUP107
NEIL3
MTF2
KAT5
TRUB2
COQ4
N6AMT1
WTAP
DNAJC5
COMMD2
CCDC59
NDUFS3
KBTBD4
HIBADH
RDH5
BLOC1S1
SEC31A
PDE6D
KLHL18
KIF9
SLC12A9
PSME3
RAD51
MAPK8IP2
SLC45A4
MRPL27
EME1
WDR36
PRRC2B
INTS12
GSTCD
RBM28
SF3A3
NOS3
COMMD4
PI16
CASC3
PDE1C
COQ8A
CNOT3
FBXO5
LUC7L2
FNBP1
KIF18B
KIAA0895
UBE2L3
NRL
H4C8
NUDT15
L1CAM
CBLL1
DHX40
CSTF1
AURKA
ITGA7
THAP9
TXLNA
PAFAH2
SLC25A51
BOLA2-SMG1P6
CDK5RAP1
BIRC2
ASF1A
PYY
NAGS
MFSD1
RTN4
USP2
CCDC88A
RTF2
VIM
BAIAP2
C6orf89
CCDC115
OGDH
STX18
TSFM
EBAG9
VTA1
NMBR
C12orf66
BCAS3
SMYD5
HDAC2
AP3S2
POM121
CRYAA2
CRYAA
POLG
PEX3
ADAT2
YARS1
S100PBP
RGPD1
ZNF581
TMEM262
MRPL40
HIRA
H4C15
H4C14
RRP12
CRKL
USPL1
KDM3A
LRRC59
TBRG4
RBM8A
TRAPPC6A
BLOC1S3
EDC3
ATR
NSUN4
USP54
RABGEF1
C16orf71
ANKS3
NOP16
HIGD2A
STAT3
ATL3
IL1R1
CCDC146
RGPD2
CCDC106
TRIAP1
GTF2H3
EIF2B1
STAM2
HUS1
YTHDF2
DCAF11
PGAM5
UTP11
KLHL20
NR1H2
PLEKHM3
TOP3B
DDX18
KIAA1586
ARFGEF2
CWC25
ZNF684
CCDC86
IGF2BP3
MED23
DPY19L4
CFAP54
NAGK
GOLGA7
TRMT6
MCM8
SSNA1
ANAPC2
POLR3B
CKAP2L
MRPL44
SUPV3L1
ATG9B
ABCB8
BSDC1
KLHL32
C8orf37
AP1M1
FBXL13
ARMC10
TSR3
GNPTG
HNRNPD
POLR3E
D2HGDH
ATP6V0D1
AGRP
OPA1
TMEM259
MTIF2
GDAP1
BLCAP
CMSS1
MACC1
DYNC2I1
NUP35
TBC1D19
SEPTIN9
CLK3
ACVR1
AAR2
GTF3C4
DDX31
LTV1
NBN
INTS7
DTL
SASS6
RABEP2
B4GAT1
NOL6
SNRPE
ITFG2
LSM5
E2F6
PMVK
TMEM208
LRRC29
DHX37
BRI3BP
SLC24A1
INTS14
GTF2H4
C5orf51
RGL1
CEP135
UFD1
CDC45
RTEL1
CFAP298-TCP10L
CFAP298
SKA3
MRPL57
PIKFYVE
TTC27
PGBD5
EBNA1BP2
CFAP57
ZBTB45
QTRT2
CCDC191
FAM228B
TFB2M
CNST
PFDN4
TMEM186
PMM2
RABGAP1L
PIGU
COX16
TMEM41A
FMC1-LUC7L2
FMC1
BRMS1
URB1
RAB5IF
NAT10
PUS10
PEX13
NUP54
DNAJC25-GNG10
DNAJC25
TACO1
MRPS23
ARPC5
KLF1
TOMM40
MCM7
AP4M1
PRMT2
TEKT2
ADPRS
STMN3
P2RX6
GTPBP10
NDUFAF5
ESF1
GCDH
VPS9D1
UTP3
EXOSC5
BCKDHA
ABCB10
GPATCH4
CENPS-CORT
CENPS
PSEN2
XRCC2
NLE1
WDR62
THAP8
THAP7
PHOSPHO2
CCDC173
TFB1M
YIF1A
TMEM151A
GLRA1
FAM98B
CNOT4
ZNF165
PCIF1
POC5
MGAT5
POLR3D
CCNL1
FAM161A
ZC3H15
WBP1
INO80B
PUM3
NMNAT1
LZIC
SECISBP2
POLN
HAUS3
NCOA7
SACM1L
SIRT4
CDC73
ATP5F1E
CDC25B
MIS18BP1
PMS2
AIMP2
LSM12
TEFM
G6PC3
SPG21
FAM133B
DCLRE1B
AP4B1
RAB11A
RHEBL1
TBC1D30
MRPL21
IGHMBP2
PPIL2
ULK4
NOL7
PPP6R1
RIMBP3C
ZNF558
IREB2
TTC21B
TPM4
ZNF778
ANGPTL6
ANK1
SF3B6
RNF166
PNO1
RBKS
BABAM2
CCNB1
LZTR1
ING3
MRPS33
PAK1IP1
HEATR1
C6orf52
WDR46
PFDN6
RRS1
ADHFE1
SELENOH
SHOX2
RSRC1
TIGD1
EIF4E2
MMAA
ADNP
DDX41
ANLN
C2orf42
SMIM12
RPAP3
GATAD2A
SEC13
PDE11A
BNIP1
PARL
STAT1
BAG6
APOM
CFAP299
ZKSCAN8
DCT
DUS2
DDX28
RPS27L
LRP2BP
SPAAR
INTS5
VPS26C
KIF15
KIAA1143
VPS35
MRPS18C
HELQ
TSN
ZAR1L
BRCA2
TBP
PSMB1
MRPL48
DPP9
SYT11
GON4L
ACVR2A
ECSIT
LRRC37A3
CBWD5
SRSF11
DSTYK
RIMBP3B
METTL15
KIF18A
ESYT2
MRPL1
AGBL3
TFIP11
PSMD3
ATAD2
ACOX3
CCT2
VPS29
RAD9B
TMEM222
KCTD9
CDCA2
TRMT61B
TAF13
SYNJ1
NTAQ1
MRPL39
GFM1
PRAME
E2F1
ANKRD12
RPS7
ARHGDIA
RPP25
PFKM
SLC35B1
PHF19
CORO1C
TAMM41
KYAT1
IPO11
RUBCN
PIH1D2
NKAPD1
TMED1
MITD1
EIF2B3
GCLC
WDR11
PTPRF
PRMT5
DPF1
RUVBL1
DCAF10
PPIP5K2
GIN1
ANKRD37
TMEM181
RLF
RBL1
RPL27
WDPCP
DDIT4
PTPN4
FBXO48
CAP1
APLF
PCNA
ZP3
H6PD
STYXL1
PLS1
ABCB6
TAF6L
YBEY
PDRG1
MCM3AP
MARCHF8
SHC1
CKS1B
IMP4
SUGCT
MPLKIP
NSA2
GFM2
BOD1
PGK1
ZSCAN22
MIA3
MLX
ZNF473
VRK3
KDM2A
SLC44A1
SLC33A1
SMN2
SMN1
CLUAP1
DNAJC11
TXNDC9
EIF5B
AP5Z1
NOL10
INHA
SKIV2L
NELFE
PSMF1
INO80C
FAM207A
LRRC49
RAD54L
DDX21
CCDC116
TEX46
KDM1A
OXNAD1
DPH3
CTU2
HCFC2
GLT8D2
SRRD
HPS4
NEU1
HBP1
OIP5
NUSAP1
ERMN
HDAC11
CTPS1
XRN2
NADK2
KLHL12
GRN
VPS45
MDH1
FBXW8
RPA2
HSD17B8
KIF2C
AARS2
ZNF398
PALB2
DCTN5
CDT1
RPP40
SNRPC
LSG1
LTA4H
RIOK1
CAGE1
RC3H2
BUB1B
WFDC3
POU2F1
DNTTIP1