ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10448665 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX10448664: HeLa

◣ SRX10448665: HeLa

◢ SRX10448666: HeLa

◢ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

PGK1
ZC3H10
RPL41
ESYT1
MTRNR2L1
MTRNR2L2
MSH3
DHFR
FRG2C
DUX4
SYNGAP1
PHF1
CUTA
C6orf226
H2BC4
H2AC6
GNG14
DHPS
UBE2M
CHMP2A
IER3
FLOT1
H4C9
H2BC11
H2AC11
PHF23
GABARAP
DVL2
PRDX2
JUNB
MTRNR2L8
PRRT2
MAZ
PAGR1
GTPBP6
MRPS18B
ATAT1
SLC38A2
HES7
ALOXE3
RPL17-C18orf32
RPL17
C18orf32
H4-16
H2AJ
TMEM242
NDUFAF3
DALRD3
SYCE2
H4C12
H4C11
H2BC15
H2AC15
STX10
IER2
IFITM3
IFITM1
IFITM2
IER5L
TMSB4X
ADM
EDC4
VPS52
RPS18
B3GALT4
FRG2
MYC
ID3
H4C3
H1-6
MSH4
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
MPDU1
LOC100996842
EIF4A1
CD68
SOX15
JMJD7-PLA2G4B
JMJD7
GADD45B
NAT10
H2BC5
H1-4
RPL26
KRBA2
ZBTB45
SLC27A5
PACSIN3
ARFGAP2
IKBKG
G6PD
VPS28
MT2A
RELA
ADGRA1
H2BC14
H2AC14
FTH1
BEST1
PDE4A
RPS2
RPL3L
RNF151
NDUFB10
CDK11A
EIF4A2
SUMF2
SYNRG
RCC1
GAPDH
H2AZ1
DNAJB14
P4HB
ARHGDIA
RABL6
CCDC183
NRAS
H4C2
H3C2
H2AC4
H4C1
H3C1
H1-1
PTPN6
C12orf57
ATN1
RPL22L1
SLC39A7
RXRB
RING1
HSD17B8
RPS28
NDUFA7
PTMA
RPL12
LRSAM1
ZNF628
NAT14
SSC5D
SLC25A6
MRI1
C19orf53
H2BC12
H2AC12
CTDSP1
DDIT4
NOP53
ART1
CHD2
RHOB
WDR74
SLC3A2
RAD23A
CALR
H2BC21
H2AC21
H2AC20
TUBB
MDC1
PDCD2L
RPL13
CPNE7
CCDC24
ABTB1
COX18
AKAP8
NPDC1
ENTPD2
H4C6
H4C7
H3C7
H2BC9
SIX5
DMPK
TRIM8
MRPL2
KLC4
CUL7
WDR46
RGL2
PFDN6
WDR37
IDI1
PRKAG1
PSMG1
SLC25A11
RNF167
PFN1
ENO3
MT1M
MT1E
C1QTNF8
POLG2
DDX5
ZFX
CLN8
ZBTB22
TAPBP
DAXX
ZBTB37
BRF2
MRPS16
DNAJC9
DUSP2
ASTL
POMZP3
GRAMD2A
FAM131A
WDR6
RRP36
MEA1
KLHDC3
MID1IP1
MOGS
WBP1
INO80B
FTL
CNOT3
SCRIB
RHBDL1
WDR24
STUB1
JMJD8
H3C12
H2BC17
H2AC17
CEBPB
H1-2
H3C3
UNK
H3-3B
MRPL28
H3C6
H2BC8
H2AC8
ZNF446
ZNF324
ZNF34
RPL8
ZBTB12
EHMT2
C2
VTI1B
GGA2
INTS5
GANAB
TMEM230
PCNA
SLC50A1
EFNA1
DPM3
GAMT
DAPK3
MVP
ADAMTS10
LY6L
ZWILCH
SNAPC5
RPL4
CXorf38
TRIM37
MRM1
DHRS11
CIRBP
FAM174C
UCKL1
SIT1
CCDC107
ARHGEF39
TMSB10
P2RY11
EIF3G
PPAN-P2RY11
PPAN
SECISBP2
CKS2
RIT1
FAM228B
TP53I3
SF3B6
MAF1
WDR97
RPS15A
CDK16
LDHC
GATD3B
GATD3A
PFDN5
MYG1
SH3BGRL3
FLOT2
DHRS13
GPAA1
EXOSC4
ZNF48
ZNF771
RCE1
RPL10
DNASE1L1
NADSYN1
DHCR7
TNFRSF12A
THOC6
HCFC1R1
CLDN6
PRKRIP1
MUC3A
ZNF703
BORCS6
NFKBIA
ARHGAP39
CENPA
C6orf47
BAG6
APOM
GPANK1
CSNK2B
EIF1
ZNF653
UBB
KIF2C
ZNF581
ZNF580
CCDC106
SETD1A
ORAI3
NAA10
ARHGAP4
RPL35
ARPC5L
WDR38
MAML1
ID1
IDH3B
TSSK4
MDP1
CHMP4A
PIP5KL1
DPM2
SFN
TUBA1B
MRPL53
TOM1
SLC16A3
PHLDA1
IRX3
RSRP1
RPS11
RPL13A
RABGEF1
MAT2A
SCAMP3
FAM189B
COX20
CCDC34
H4C5
H3C4
H2BC7
H2AC7
H4C4
ATP5F1E
MSH5
MPIG6B
LY6G6C
DDAH2
CLIC1
STPG3
FAM166A
UBC
NELFB
TUBB4B
RNASEK
C17orf49
BCL6B
ABCB6
NPM3
FGF8
HNRNPA1
CBX5
TYSND1
KMT5B
TEDC2
HAX1
EPN1
NOLC1
IGF2BP3
HMBS
DPAGT1
H2AX
C2CD4C
RECQL4
LRRC14
LRRC24
C8orf82
HPDL
MUTYH
UBTF
GAS2L1
KLRC2
RNF223
H3C10
H2BC13
H2AC13
PDPK1
CEMP1
MTFP1
GPN2
CEBPA
CXCR5
PYCR3
TIGD5
EEF1D
VEZF1
AQP3
CDH24
HAGHL
CCDC78
ANTKMT
METRN
TSC22D1
MLLT6
ATP6V0C
AMDHD2
CDC42EP1
MTA2
SP3
TUT1
LGALS2
H1-10
NFE2
MAMDC2
TBK1
SURF6
CFD
TNFSF13
SENP3
DYRK1B
ZNF584
CD79A
ARHGEF1
C19orf48
LOC105372440
ACP4
ICA1L
NKIRAS1
RPL15
VPS4A
HMCES
SNAP47
JMJD4
ELK1
EEF1A1
HCN2
MRPL40
HIRA
UQCC3
LBHD1
CSKMT
C11orf98
RAB40C
PHOX2A
PRMT3
ZNHIT2
TM7SF2
FAU
NUDT1
MRM2
MAD1L1
PHRF1
CAMK2N2
VWA7
GMPPB
AMIGO3
TUSC2
RASSF1
HYAL2
ISY1-RAB43
ISY1
FUT11
CHCHD1
TSPAN31
MARCHF9
CDK4
AGAP2
PCBP1
RPS29
GAS1
H3C13
H2BC18
NAPRT
MROH6
ROPN1L
COL23A1
CCDC200
INPP5K
RPL10A
ZFP36L1
CAPNS1
GET4
NXF1
CELSR3
SLC12A6
NUTM1
NOP10
MYOZ3
INPP5E
CYRIB
FBF1
VEGFB
TRPT1
NUDT22
DNAJC4
TIMM17B
PQBP1
NANOS1
SELENOH
BTBD18
S100A6
S100A5
RPL27A
NDST2
RBM4
SLC35A2
PIM2
TAOK2
MFSD3
GPT
PTOV1
PCF11
OGFOD2
ARL6IP4
NOL3
KIAA0895L
TRAF7
RAB26
GMEB2
HMGA1
CACFD1
CAPN15
SLC2A6
FADS2
FADS1
UPF3A
TMEM132A
TMEM109
SMIM29
BTNL9
H3C8
H2BC10
NUDT17
PRR25
CTNNAL1
SMTN
TPD52L2
ABHD16B
SHC1
PYGO2
PBXIP1
LOC101928120
PIM1
FHL3
SF3A3
RPL23
C17orf98
YY1
TMEM107
VAMP2
SRA1
SLC35A4
APBB3
EIF4EBP3
BASP1
TBCD
ARID5B
FAM210B
C19orf71
SREBF2
CSNK1G1
POMT1
PAXX
CLIC3
SCFD1
MVB12A
FLYWCH1
DUSP1
SGK1
STAG1
TUBGCP6
HDAC10
SPOUT1
ANAPC4
CHD5
HTR6
IRF2BP2
MMP24OS
MMP24-AS1-EDEM2
MAPK8IP3
MAN2C1
IAH1
DPH7
GTF2A2
SLC25A39
URGCP
URGCP-MRPS24
TFPT
PRPF31
TNS2
PPP1R15B
EPN2
ZNF513
H4C8
SNX17
EIF2B4
LMNB1
PSMB10
LCAT
CTRL
TMEM121
HMGN2
MYL6B
MYL6
TAF10
RRP8
ILK
TPP1
CRELD1
ATG4D
MCCD1
XRN1
SCARF1
RILP
RPEL1
DONSON
SNX14
NMT1
DCAKD
NAA80
IFRD2
HYAL3
HYAL1
SPHK2
SPACA4
RPL18
FAM83E
THOC5
ATF4
TIGD3
SHOX2
RSRC1
APEX2
CISD3
CDKN1C
KAZALD1
CEBPD
TCIRG1
NDUFS8
ADAT1
POLB
TBR1
SLC35B2
HSP90AB1
TXNIP
NFKBIE
STYX
SUOX
RPLP0
GCN1
WDR45
PRAF2
PHF19
TLCD1
RPL23A
RAB34
NEK8
E2F3
SYF2
LENG9
GPR137
TULP3
PLPPR3
SNX16
MOV10
FOSL1
FIBP
CCDC85B
PNMA1
PCBP4
ABHD14B
ABHD14A-ACY1
ABHD14A
NME4
DECR2
SEC14L1
FBXW4
RPL35A
LMLN
IQCG
RPL37
C11orf91
LGR6
GSTO2
KRT10
PTCH1
C5orf15
ACTL10
GFAP
RGS19
OPRL1
LKAAEAR1
TTLL3
KCNK4
BAD
C20orf144
SLC39A1
CRTC2
CREB3L4
C5orf24
GNE
MRPS7
MIF4GD
GGA3
CKB
HAMP
ROMO1
NFS1
LRP2BP
ANKRD37
SETD1B
RHOF
PWP2
LOC102724159
PYGM
SRSF11
ADK
VARS2
GTF2H4
CCDC138
RPL3
TRABD
SELENOO
SLC5A5
RPL18A
AK1
RPS15
APC2
TTYH2
RPL38
MLXIP
ANP32B
ABCA7
PITX3
GBF1
TEX52
PIP4K2B
CRK
TXN2
TRIP6
SRRT
PLCXD1
RBM3
TIMM13
POLD1
NR1H2
PIDD1
SLC25A22
RPLP2
RPS27A
CLHC1
CD320
SIGMAR1
ARID3C
IGF1R
PHLDA2
RRAD
CDH16
ZNRD2
FAM89B
EHBP1L1
CYBA
IL17C
ZASP
SAP25
PIRT
IMPDH2
APTX
KRT18
CRYAA2
CRYAA
TSEN54
MRPS34
LLGL2
EME2
TARBP2
MAP3K12
NME3
CELF1
C16orf46
NPFF
REEP4
HR
KLHL11
TMEM223
TMEM179B
CASKIN2
APOLD1
CDKN1B
TLL2
PHPT1
AJM1
TUBD1
RPS6KB1
SGSM3
PABPN1
FBXO4
ABCF3
THEM6
NUMBL
SLURP1
SSH3
EFNA2
RGP1
MSMP
GBA2
GNB1
PEAK3
OAZ1
RPL6
ZNF358
MCOLN1
CDC6
HSPB1
C1QTNF12
SDF4
B3GALT6
C19orf25
ZACN
SRP68
GALR2
TFAP2A
SFXN4
TMED4
DDX56
TAF6
MBLAC1
CNPY4
MLX
COASY
ZNF35
SPDYE5
POM121C
H2AB3
H2AB2
H2AB1
HSPE1-MOB4
HSPE1
HSPD1
NGRN
F8A3
F8A2
F8A1
AEBP1
SLC25A42
FNDC7
ZFP36L2
NDUFS3
KBTBD4
FAM180B
SDF2L1
FBXO46
SIRT7
PCYT2
MAFG
MATR3
LARP1
PATZ1
SPEN
KPNB1
ZNF865
ZNF524
FIZ1
POP5
DRAP1
C11orf68
BUD13
KLRC1
TTC33
C7orf26
USP21
UFC1
PPOX
DYNLL1
CDK5R1
RNF44
CDHR2
SLC25A5
WDR90
FAM156B
FAM156A
PPIL2
LOC389831
SRSF2
MFSD11
METTL23
JMJD6
PNPLA2
HNRNPDL
ENOPH1
RAB1B
DNAJB4
JADE2
PITPNA
GADD45A
DPH2
B4GALT2
ATP6V0B
CEP192
ACOX3
CDKN1A
RHOV
RAB44
NECAB3
EXOSC6
FNBP1
PLPP5
BAHCC1
TRIM52
IRF2BP1
TSFM
ACACB
UBE2S
CFAP410
SLC25A10
MRPL12
RPS5
CITED4
RNF225
WDR81
TLCD2
NOP2
APOE
APOC1
NOL7
CHEK1
MTFR2
RPL19
CACNB1
MRNIP
BAG2
RPS12
PNRC1
ZNF3
COPS6
KCNJ14
GRWD1
MCM7
FUT8
ETS2
RRM1
PNRC2
RPUSD1
CHTF18
ANKRD39
ADM2
MIOX
MST1
DBP
ARHGEF12
DPP3
HUWE1
CDC34
EXOC3L1
ELMO3
E2F4
NDUFS1
EEF1B2
FSTL3
TEX45
RNASEH2C
KAT5
KCNK7
PGP
E4F1
ERCC5
BAZ2A
ATP5F1B
PPP1R37
DLG4
ACADVL
CCAR2
C8orf58
CCND1
SEC16A
C9orf163
RPS14
WDR83OS