ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10448666 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX10448664: HeLa

◢ SRX10448665: HeLa

◣ SRX10448666: HeLa

◢ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

PGK1
FRG2C
H2BC4
H2AC6
MTRNR2L2
MSH3
DHFR
MTRNR2L1
SYCE2
ZC3H10
RPL41
ESYT1
DUX4
GNG14
DHPS
C6orf226
H4C9
H2BC11
H2AC11
PRDX2
JUNB
FRG2
SYNGAP1
PHF1
CUTA
TMEM107
VAMP2
H2BC5
H1-4
H4C12
H4C11
H2BC15
H2AC15
PHF23
GABARAP
DVL2
EPN2
SLC38A2
VPS52
RPS18
B3GALT4
NDUFAF3
DALRD3
IER3
FLOT1
MID1IP1
H2BC12
H2AC12
IFITM3
IFITM1
H4C3
H1-6
UBE2M
CHMP2A
MTRNR2L8
GADD45B
MRI1
C19orf53
TMEM242
FOSL1
FIBP
CCDC85B
RPL17-C18orf32
RPL17
C18orf32
MYC
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
ZFP36L1
GTPBP6
H4-16
H2AJ
ID3
RPL26
KRBA2
EDC4
H4C2
H3C2
H2AC4
H4C1
H3C1
H1-1
E2F3
MSH4
ADGRA1
SUMF2
PTPN6
C12orf57
ATN1
H2BC14
H2AC14
P4HB
ARHGDIA
ARHGAP39
MRPS16
DNAJC9
IER5L
STX10
IER2
NADSYN1
DHCR7
SYNRG
JMJD7-PLA2G4B
JMJD7
RCC1
SCRIB
PRRT2
MAZ
MRPS18B
ATAT1
NRAS
ZWILCH
SNAPC5
RPL4
ZNF628
NAT14
SSC5D
RHOB
H4C6
H4C7
H3C7
H2BC9
IFITM2
PRKRIP1
VPS28
H1-2
H3C3
MOGS
MRPL53
FTH1
BEST1
PDE4A
ART1
H2BC21
H2AC21
H2AC20
NOP53
RPL22L1
VEZF1
COX20
POLG2
DDX5
CHD2
SIRT7
PCYT2
MAFG
TMSB4X
HES7
ALOXE3
CAPNS1
ZNF34
RPL8
CNOT3
RRP36
MEA1
KLHDC3
NAT10
KMT5B
H3C6
H2BC8
H2AC8
DDIT4
ADM
PACSIN3
ARFGAP2
TUBB
MDC1
PFDN5
MYG1
IRF2BP2
MSH5
MPIG6B
LY6G6C
DDAH2
CLIC1
TRIM8
FLYWCH1
HMCES
FAM131A
MPDU1
LOC100996842
EIF4A1
CD68
ZNF581
ZNF580
CCDC106
SOX15
STAG1
UBTF
ATP6V0C
AMDHD2
ZNF446
ZNF324
H3C12
H2BC17
H2AC17
SNX14
KIF2C
MRPL40
HIRA
GPN2
FADS2
FADS1
RPL13
CPNE7
SIX5
DMPK
LY6L
SAR1A
H2AZ1
DNAJB14
SGK1
GGA2
UQCC3
LBHD1
CSKMT
C11orf98
HPDL
HMGN2
RPS2
RPL3L
RNF151
NDUFB10
EIF4A2
PRKAG1
PSMG1
CXorf38
CIRBP
FAM174C
INPP5E
ABTB1
CITED4
CDKN1C
MRPL2
KLC4
CUL7
GTF2A2
WDR74
SLC3A2
C5orf24
ZBTB45
SLC27A5
ARID5B
TUSC2
RASSF1
HYAL2
RIT1
MT2A
H4C5
H3C4
H2BC7
H2AC7
H4C4
PHLDA1
CCDC200
IKBKG
G6PD
SLC25A39
FAM228B
TP53I3
SF3B6
AKAP8
RAD23A
CALR
SLC25A11
RNF167
PFN1
ENO3
WDR90
UBB
ZNF653
BTNL9
WDR45
PRAF2
DUSP2
ASTL
MST1
RPL12
LRSAM1
RPL10
DNASE1L1
VTI1B
TNFRSF12A
THOC6
HCFC1R1
CLDN6
SHC1
PYGO2
PBXIP1
LOC101928120
RPL27A
SLC39A7
RXRB
RING1
HSD17B8
PCBP4
ABHD14B
ABHD14A-ACY1
ABHD14A
SIT1
CCDC107
ARHGEF39
STPG3
FAM166A
TUBB4B
FLOT2
DHRS13
S100A6
S100A5
MOV10
NAA10
ARHGAP4
ZBTB37
NR4A2
VWA7
EEF1A1
WBP1
INO80B
CEBPB
MT1M
MT1E
HMBS
DPAGT1
H2AX
PNMA1
CDC42EP1
LGALS2
RPS28
NDUFA7
RAB40C
SECISBP2
CKS2
PAGR1
MVP
CDK11A
PHF8
PTMA
POMZP3
FTL
METTL8
DCAF17
TOB2
RHBDL1
WDR24
STUB1
JMJD8
SLC39A4
RPL35
ARPC5L
PCBP1
JADE2
PATZ1
H3C13
H2BC18
CYRIB
IGF2BP3
WDR6
PCF11
C6orf47
BAG6
APOM
GPANK1
CSNK2B
LY6G5B
PHLDA2
TYMP
SCO2
ODF3B
THOC5
RPS23
ATP6AP1L
GAPDH
ID1
HNRNPA1
CBX5
NFE2
SH3BGRL3
OGFOD2
ARL6IP4
IRF2BP1
SFN
RPS11
RPL13A
KLF6
RELA
ROPN1L
NXF1
SCAMP3
FAM189B
TCTEX1D2
PDCD2L
MRM1
DHRS11
SFT2D3
TRMT112
PRDX5
ESRRA
DYNLL1
FIGN
EPN1
GMEB2
TEDC2
RABL6
CCDC183
ACTN4
CCND1
ISL2
GSTO2
PWP2
LOC102724159
RNASEK
C17orf49
BCL6B
TMSB10
ATF4
CCDC24
NOLC1
RECQL4
LRRC14
LRRC24
C8orf82
ELK1
DUSP5
CCDC34
N4BP2
WDR46
RGL2
PFDN6
SLC25A6
TLE3
MDP1
CHMP4A
SP3
ZNF35
SPEN
SRSF11
MAML1
PHOX2A
ZNF48
ZNF771
MUC3A
DAPK3
NUDT1
MRM2
MAD1L1
SRSF4
H3C8
H2BC10
COL23A1
TRIM37
FUT11
CHCHD1
QSER1
MAT2A
CD79A
ARHGEF1
IGF1R
PNRC1
ING1
CARS2
HAGHL
CCDC78
ANTKMT
METRN
TFAM
SPOUT1
MTA2
TUT1
FSTL3
RCC2
LMNB1
PYCR3
TIGD5
EEF1D
COX18
LDHC
ZGLP1
FDX2
RPL35A
LMLN
IQCG
RSRP1
ZFX
SNAPC4
SGSM3
LONP1
CATSPERD
C16orf46
NANOS1
H3C10
H2BC13
H2AC13
C1QTNF8
ANKH
PNPLA6
CD320
MLLT6
MRPL28
GATD3B
GATD3A
LENG9
H4C8
IDH3B
SLC35A2
PIM2
ISY1-RAB43
ISY1
LRP8
HMGA1
ZCCHC14
MTIF3
EIF1
DNAJB4
MAMDC2
WDR38
PHRF1
CDK16
KLHL11
RPS15A
UAP1L1
MAN1B1
NDST2
MATR3
DPH7
UCKL1
ETV6
SEMA4C
TRIM45
GPAA1
EXOSC4
SNAP47
JMJD4
RPL3
STYX
LARP1
CAPN15
FLT4
SLC25A10
MRPL12
BCL6
NPDC1
ENTPD2
INPP5K
SHOX2
RSRC1
FANCC
POLR3D
TMEM230
PCNA
XRN1
GINS2
PPP1R37
GTF2A1
SF1
DONSON
SCFD1
CENPA
YY1
FAM117B
ZNF782
LINGO1
GRAMD2A
LAMP1
APOLD1
CDKN1B
CCNT1
TEX49
SLC25A35
RANGRF
GMPPB
AMIGO3
CDH24
IRX3
WBP1L
MYL6B
MYL6
TNS2
TPCN1
IQCD
CTDSP1
SLC50A1
EFNA1
POLD1
NR1H2
DPM3
CAMK2N2
ADK
BORCS6
PHPT1
AJM1
SEC14L1
LAG3
PTMS
CEP192
SLC6A9
CDKN2A
GINS3
TOM1
P2RY11
EIF3G
PPAN-P2RY11
PPAN
ZNRD2
FAM89B
EHBP1L1
NAA80
IFRD2
HYAL3
TBR1
SNX16
VGF
RPS29
GAS2L1
PEAK3
OAZ1
FBF1
ARF3
WDR81
TLCD2
PANK1
MAP3K1
ATXN2
PSEN1
TNFRSF6B
ZBTB2
SMIM29
LRFN4
TAS1R3
INTS11
CPTP
MAF1
WDR97
NAT16
TIMM13
DYRK1B
ABCB6
ZBTB22
TAPBP
DAXX
MYNN
ACTRT3
IMPDH2
ACVR2B
SMTN
MAPK8IP3
PAIP2
SPATC1L
BAG2
TYSND1
MTMR10
C8orf37
INTS5
GANAB
JUN
CRYAA2
CRYAA
TLL2
KRT10
C1orf56
TSKU
URGCP
URGCP-MRPS24
RAB23
CRK
PXDC1
RPUSD1
CHTF18
VPS9D1
ARID1A
SETD1A
ORAI3
CCDC138
TBK1
VARS2
GTF2H4
C19orf71
NUDT17
SIGMAR1
ARID3C
FAM76B
CEP57
SERINC4
SERF2
HYPK
DENND5B
SURF6
TUBGCP6
HDAC10
CALM2
RAB1B
ABCA7
USP22
RHOT2
UBC
GFAP
SAMD1
C19orf67
PRMT3
BASP1
PKM
SORBS2
SYF2
DRAP1
C11orf68
AGO3
SMG9
NPM3
FGF8
TTC33
NOL3
KIAA0895L
ACOX3
RPLP0
GCN1
HAX1
MVB12A
CYC1
PHF10
C1QBP
CSGALNACT1
CELF1
PIM1
KAZALD1
MED10
KIF27
PRKDC
MCM4
NCOA5
PMS1
ORMDL1
TRIM25
USP34
CEBPA
PLEKHN1
NOC2L
KLHL17
TSC22D1
TSEN54
LLGL2
CASKIN2
RPL6
SLC30A7
EXTL2
PIP5KL1
DPM2
MLXIP
TEX45
PXDN
ZBTB12
EHMT2
C2
RPEL1
SNX5
MGME1
POLB
PTP4A1
ZNF513
SNX17
EIF2B4
BHLHE40
TMEM243
ARF6
TMEM121
E2F5
CEBPD
JUND
IQCN
NME6
TMEM223
TMEM179B
ICA1L
BRF2
SETD5
KLF9
MNT
SGF29
DPP3
COX8A
VAV2
SELENOH
BTBD18
TXN2
PTAR1
TBXA2R
CTNNAL1
FNDC7
CHD7
MMP24OS
MMP24-AS1-EDEM2
ROMO1
NFS1
OVCA2
ATG4D
YWHAH
C22orf24
SPHK2
CS
CRELD1
KLC2
DBP
ILF3
ZFP36
PLEKHG2
EFCAB13
BAZ2A
UNK
H3-3B
ATP5F1B
FAM210B
SREBF2
THEM6
GPR137
SLURP1
KCNK4
BAD
PMM1
QTRT1
ATP5F1E
TAF10
RRP8
ILK
TPP1
PLPPR3
AQP11
KMT2E
BCAR3
TCIRG1
NDUFS8
RNF223
SRSF2
MFSD11
METTL23
JMJD6
LRRC25
GDF15
ZNF143
RRS1
ADHFE1
MLX
COASY
LRP2BP
ANKRD37
YAP1
ARID2
CUX1
PGGT1B
TGIF1
MARCHF6
ADAT1
CLN8
CHD5
PIP4K2B
HSF4
FOXO3
TRADD
FBXL8
PCMTD2
CPT1A
SPATA2L
NAPRT
MROH6
SLC39A1
CRTC2
CREB3L4
PLPP5
SQSTM1
SLC25A28
MRPS34
EME2
NME3
TTYH2
RPL38
BCOR
UQCRB
POLR2H
CLCN2
USP8
TLCD1
RPL23A
RAB34
NEK8
GTF2IRD2B
ANAPC4
LRP6
TNNC2
UBE2C
MTFR2
LRPPRC
RPL37
STX5
TBC1D24
NTN3
MKNK2
FBXL14
TUBA1B
SLC35B2
HSP90AB1
LPCAT3
SPACA4
RPL18
FAM83E
SCARF1
RILP
CCDC97
MYOZ3
LCN12
FBXW5
C8G
RASD1
USP3
UNC13D
ZNF217
SLU7
PTTG1
DCTN6
NKIRAS1
RPL15
H1-10
VEGFB
TRPT1
NUDT22
DNAJC4
NEIL1
CDC6
LIFR
APTX
ZNF696
ENOSF1
TAF9B
TFAP2A
TIMM17B
PQBP1
ZFP64
SEMA4B
CXCR4
GET4
VPS4A
HDAC7
RPS14
RUNX1
SRGAP2C
FAM72B
FOSB
MAP1LC3B
FBXO31
NFIB
CYTH1
CXCR5
THAP7
MTCL1
NDUFS3
KBTBD4
FAM180B
FNBP1
HOXA3
FHL3
CFD
SF3A3
DPH2
B4GALT2
ATP6V0B
HOXA6
HOXA5
CENPH
PERP
TCIM
LBR
TSFM
C16orf71
ANKS3
TAF4
C19orf48
LOC105372440
ACP4
GADD45A
NMT1
DCAKD
TRAF7
RAB26
ARID1B
PHF14
NOXO1
GFER
NARF
CYBC1
TBL3
OGFR
MACIR
GABARAPL1
MT1X
ETV4
SRA1
SLC35A4
APBB3
EIF4EBP3
XBP1