ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5441334 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX10448664: HeLa

◢ SRX10448665: HeLa

◢ SRX10448666: HeLa

◢ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◣ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

ZNF335
RABL2A
MAPKAPK5
PPARA
SRD5A1
NVL
RWDD1
RABL2B
TSN
ICE1
MRPS7
MIF4GD
GGA3
DYNC1LI2
NRIP1
TAOK3
SUDS3
NUP85
PRDM10
S1PR4
NCLN
ASB13
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
VTI1B
CAPRIN1
DUX4
MYC
MTRNR2L8
REXO1
CACTIN
H4C12
H4C11
H2BC15
H2AC15
C19orf48
PSMD12
RBBP5
FADD
IPO13
RPLP0
GCN1
OAZ3
MRPL9
ZC3H10
RPL41
ESYT1
VDAC2
RIT1
VEZF1
UPF2
SEC61B
ALG2
FAM187A
EFTUD2
CCDC103
EXOSC5
BCKDHA
POLR3F
DZANK1
ZWILCH
SNAPC5
RPL4
VARS1
NME6
HSPA9
NDUFA4
SKP1
HDGF
MRPL24
PI4KB
TM4SF1
EDC4
COX7A2L
SGK1
LYRM4
FARS2
SHROOM2
PES1
H1-2
H3C3
EEF1A1
H4C3
H1-6
EPN1
HADHB
HADHA
OAT
POLG2
DDX5
ZRANB2
UBE2I
H2BC5
H1-4
C6orf226
SLC35B1
GRAMD2A
NNAT
BLCAP
MED1
CDK12
H2BC14
H2AC14
NFKBIL1
DDX39B
ATP6V1G2
ZNF576
IRGQ
SECISBP2
CKS2
AXDND1
RPS11
RPL13A
SUCLG1
TLCD1
RPL23A
RAB34
NEK8
ACTR10
MAMDC2
COX20
ATP6V0C
AMDHD2
PSMD1
MRPS5
ELMO2
POLR2E
GPX4
UCKL1
STAM
USP1
DCTN1
NAT10
ATP5F1E
CDC73
SUMF2
EIF4A2
HNRNPA1
CBX5
NFE2
RCC1
C6orf47
BAG6
APOM
COMMD1
CCT4
GOSR2
SFI1
EIF4ENIF1
TTC8
MPDU1
LOC100996842
EIF4A1
CD68
NRAS
NUDT1
MRM2
MAD1L1
MRM1
DHRS11
VPS52
RPS18
B3GALT4
MTRNR2L1
H2BC4
H2AC6
MTRNR2L2
MSH3
DHFR
DDIT4
WDR90
PSMG2
CEP76
TSNAX
MRPL2
KLC4
CUL7
AKAP8
ANAPC7
SUPV3L1
RPL17-C18orf32
RPL17
C18orf32
BICRA
PAK1IP1
C6orf52
PCBP1
PAXBP1
INPP5E
RABGGTB
DAPK3
RPN1
NUP205
SELENOF
HS2ST1
DNAJC21
STAM2
TAF9
RAD17
AK6
SPATC1L
FAM104A
C17orf80
MRI1
C19orf53
IER3
FLOT1
PDAP1
BUD31
HOXC8
HOXC4
HOXC6
MRPS18B
ATAT1
BAZ2A
ATP5F1B
RPL26
KRBA2
SART3
ISCU
H4C2
H3C2
H2AC4
H4C8
MSH4
FARSB
EIF2S3
TMED1
H2BC21
H2AC21
H2AC20
GPAA1
EXOSC4
RNF166
CTU2
ATP5MG
ARF3
VPS28
PROZ
FAM131A
SLC50A1
EFNA1
GADD45GIP1
DPM3
RPL21
TBCK
AIMP1
PNO1
ZBTB37
RPL22L1
XRN1
FTH1
BEST1
RAD23A
CALR
MRPS16
DNAJC9
PRRT2
MAZ
PAGR1
MVP
CCDC97
PTMA
NPM3
FGF8
HAX1
TBK1
HMCES
ERCC6L2
RPS2
RPL3L
RNF151
NDUFB10
H3C13
H2BC18
TIMM13
TUBB
MDC1
FRG2
ANKFY1
C5orf15
RPL19
CACNB1
MAML1
ECI1
RRP36
MEA1
KLHDC3
GPSM1
CARD9
TOB1
GAPDH
DENND4B
MAPK8IP3
TM9SF1
IPO4
TTC33
MAT2A
H4C1
H3C1
H1-1
MLX
COASY
H4C13
H3C11
H2AC16
H1-5
SYNRG
TUSC2
RASSF1
HYAL2
COX18
NDUFS3
KBTBD4
FAM180B
FBXO4
SCRIB
UBE2M
CHMP2A
PRDX2
JUNB
C7orf25
RHOB
WDR74
SLC3A2
DPH7
TMEM132A
FRG2C
ART1
GH1
CSHL1
PGK1
PHF23
GABARAP
DVL2
H4C9
H2BC11
H2AC11
SYCE2
H2AZ1
DNAJB14
SYNGAP1
PHF1
CUTA
LOC102724770
DGCR6
COL23A1
GTPBP6
GNG14
DHPS
TMEM242
ZNF34
RPL8
NDUFAF3
DALRD3
ID3
CCDC200
CIRBP
PACSIN3
ARFGAP2
FAM174C
SMIM14
H4-16
H2AJ
CHD2
IFITM3
IFITM1
PTPN6
C12orf57
ATN1
H2BC12
H2AC12
CTDSP1
IFITM2
HMGB1
JMJD7-PLA2G4B
JMJD7
ABTB1
RHBDL1
STX10
IER2
ZNF581
ZNF580
CCDC106
TSSK4
GGA2
WDR24
STUB1
JMJD8
PRKAG1
POLR2J3
SLC38A2
RNASEK
PHRF1
HES7
ALOXE3
SOX15
MSH5
MPIG6B
LY6G6C
DDAH2
CLIC1
PFDN5
MYG1
C17orf49
BCL6B
USP29
GADD45B
CXorf38
SCAMP3
FAM189B
P4HB
IER5L
RPL27A
SIRT7
PCYT2
MAFG
ADM
RPS27A
CLHC1
SLC39A7
RXRB
RING1
HSD17B8
NAA10
ARHGAP4
PRKRIP1
KMT5B
NADSYN1
DHCR7
RPS23
ATP6AP1L
ARHGDIA
TMEM107
RELA
WDR37
IDI1
MRPL40
HIRA
TMSB4X
H4C6
GPN2
MOGS
RPL13
RABL6
CCDC183
SHC1
PYGO2
PBXIP1
LOC101928120
ZNF653
WDR6
PDE4A
FAM228B
SRSF11
TRIM8
ZBTB45
SLC27A5
CPNE7
TP53I3
SF3B6
SGSM3
CDK11A
RPL35A
LMLN
IQCG
MRPL53
EPN2
PTGES2
FLOT2
DHRS13
POMZP3
CCDC34
IRF2BP2
SNAP47
JMJD4
E2F3
HMBS
H4C7
H3C7
H2BC9
UGT1A4
UGT1A3
H4C5
H3C6
H3C4
H2BC7
H2AC7
VAMP2
TMEM230
PCNA
NOP53
ZFP36L1
DONSON
KMT2A
DPAGT1
SH3BGRL3
H2AX
FLYWCH1
GET4
ZNF446
ZNF324
MMP24OS
MMP24-AS1-EDEM2
FUT11
CHCHD1
MID1IP1
SIT1
MOV10
CCDC107
ARHGEF39
ADK
NDST2
PSMG1
ZNF628
NAT14
BTNL9
C5orf24
H3C12
H2BC17
H2AC17
PEAK3
OAZ1
EFNA2
SSC5D
MT2A
TOM1
H4C4
CCDC24
BRWD1
VPS9D1
SLC25A11
RNF167
PFN1
ENO3
STPG3
FAM166A
GTF2A2
PIN4
IKBKG
G6PD
SIX5
HMGN2
DMPK
RPL12
LRSAM1
TMSB10
FTL
NOLC1
NANOS1
GPANK1
CSNK2B
SLC25A10
MRPL12
HSPA1B
STAG1
ID1
PDHX
APIP
KIF2C
H2BC8
H2AC8
CAPNS1
LOC105372440
ACP4
ZNF48
RPS28
NDUFA7
INTS5
GANAB
DYRK1B
ACTL10
ADGRA1
TRIM37
NECAB3
DEFA5
WDR46
RGL2
PFDN6
RPS29
RPS5
RECQL4
LRRC14
ZFX
CYRIB
LRRC24
C8orf82
WBP1
INO80B
IGF2BP3
CDH24
CD79A
SCFD1
FOSL1
FIBP
CCDC85B
ARHGEF1
ARHGAP39
SETD1A
ORAI3
VWA7
NXF1
TNFRSF12A
THOC6
HCFC1R1
CLDN6
CDK16
AVPI1
SURF6
H3C10
H2BC13
H2AC13
PNMA1
VARS2
GTF2H4
GMPPB
AMIGO3
MDP1
CHMP4A
EXOSC6
PARP16
TAF10
RRP8
ILK
TPP1
THAP9
SEC31A
TUBGCP6
PHLDA1
HDAC10
PDCD2L
PCBD2
ZNF513
SLC25A6
CRYAA2
CRYAA
RCOR3
UQCC3
LBHD1
CCDC138
TEDC2
RPL37
CISD3
FBF1
UBC
MAN2C1
SLC39A4
CSKMT
C11orf98
PIP4K2B
DRAP1
C11orf68
TRIM65
ZNF771
PCBP4
ABHD14B
ABHD14A-ACY1
ABHD14A
UNK
NELFB
H3-3B
NOP14
GRK4
CD320
SELENOH
LDHC
POLD1
NR1H2
RPL35
RPL3
ARPC5L
SPOUT1
CDC42EP1
MRPL38
GOLGA5
SNX17
RPL10
HAGHL
DNASE1L1
CCDC78
ANTKMT
NKIRAS1
CEBPB
RCE1
KLHL11
UBTF
GSTO2
MTA2
TSC22D1
SP3
TUBB4B
MT1M
MT1E
TSEN54
MRPS34
LLGL2
FADS2
FADS1
EME2
RHOT2
RPS15A
SNX14
BAG2
TUT1
EIF1
RXYLT1
TYSND1
MRPL28
SNAPC4
EIF2B4
TARBP2
MAP3K12
MRTO4
EMC1
METRN
PIP5KL1
NME3
DPM2
MAF1
IMPDH2
SMC2
NAPRT
MROH6
SPHK2
TMEM223
TMEM179B
STYX
LAMP1
INPP5K
SPACA4
RPL18
FAM83E
ZGLP1
UPF3A
FDX2
HPDL
C7orf26
CELF1
WDR45
PRAF2
ELK1
YJU2
CASKIN2
TYMP
SCO2
ODF3B
H3-3A
ALLC
WDR97
MLLT6
WDR38
OGFOD2
ARL6IP4
TFAP2A
P2RY11
EIF3G
MST1
BTBD18
CYB561D1
GLRX2
GATD3B
GATD3A
CDKN1C
MATR3
FNBP1
GAS2L1
ROPN1L
TOB2
LMNB1
PRELID3B
SRSF4
PPAN-P2RY11
PPAN
RSRP1
DPH6
RBM4
ARID5B
GPS2
EIF5A
TOP1MT
GTF2IRD2B
DUSP2
ASTL
ISL2
IDH3B
SCARF1
RILP
THOC5
OR6B2
NDUFA10
RPS12
LARP1
USP21
UFC1
PPOX
IGF1R
RPL7
RDH10
PROCA1
CTNNAL1
DYNLL1
GTF3C4
DDX31
SLC39A1
CRTC2
CREB3L4
SLC25A39
TRABD
SNX9
MARCHF6
HOXA3
ZNF35
SLC35A2
PIM2
TRIP6
SRRT
VPS4A
TMEM109
ZBTB26
RABGAP1
CITED4
RNF225
PABPN1
SAR1A
ZNRD2
FAM89B
EHBP1L1
RAB40C
MUC3A
ICA1L
NAA80
IFRD2
HYAL3
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12F
GAGE12B
ANAPC4
UBB
KIF27
ZBTB12
EHMT2
C2
TTYH2
RPL38
ABCB6
ATXN2
RBKS
BABAM2
WDR81
DENR
AGO3
TSC1
PYCR3
GFI1B
PHOX2A
NFKBIA
TAOK2
RPL15
CENPA
TUBA1B
RPL6
PIDD1
TSKU
GFAP
TIGD5
EEF1D
BCAP29
APOLD1
SYF2
PATZ1
CALM2
CNPY2
NOXO1
ABHD17A
URGCP
SPEN
GMEB2
RPEL1
MEMO1
POLR2C
RGS19
OPRL1
LKAAEAR1
ZNF865
ZNF524
SFN
FIZ1
ZBTB22
TAPBP
DAXX
FAM210B
FSTL3
LY6L
GAGE2C
GAGE2B
GAGE2A
GAGE1
LGALS2
C16orf46
PCF11
URGCP-MRPS24
CDKN1B
ENAH
VPREB1
CNOT3
NME4
DECR2
SLC35B2
HSP90AB1
ABCF3
SPDYE5
POM121C
LRP6
CAMK2N2
SAMD1
PWP2
LOC102724159
C19orf67
LRRC6
SRCAP
LOC730183
TXNIP
SLC12A6
PRMT3
NUTM1
NOP10
SLC25A22
VIM
MFSD3
RACK1
TLL2
PPFIA4
PACS1
PNRC1
LENG9
HMGA1
H2BU1
H2AW
EAPP
MYL6B
MYL6
BRF2
ZCWPW1
PPP1R35
MEPCE
ST3GAL3
USP34
GINS2
ATF4
PPP1R37
ADNP
SMIM22
ROGDI
GAMT
ZNHIT2
TM7SF2
FAU
ROMO1
NFS1
SFT2D3
LRRC37A3
SEC14L1
RABGEF1
H3C8
H2BC10
PROSER1
NHLRC3
CRK
GFER
HNRNPU
MVB12A
TMPPE
GLB1
S100A6
S100A5
C19orf71
SLC25A42
AP3M1
PLPP5
CELSR3
BAHCC1
SREBF2
TIGD3
PGP
CS
SELENOO
SLC5A5
RPL18A
PPP3CB
CRELD1
ATXN7L2
THEM6