ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5441331 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX10448664: HeLa

◢ SRX10448665: HeLa

◢ SRX10448666: HeLa

◢ SRX10448667: HeLa

◢ SRX5441330: HeLa

◣ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

RABL2B
ZNF335
RABL2A
TSN
SRD5A1
MAPKAPK5
DYNC1LI2
NVL
CACTIN
NUP85
ICE1
PSMD12
MRPS7
MIF4GD
GGA3
POLR3F
DZANK1
S1PR4
NCLN
VDAC2
GOSR2
REXO1
OAZ3
MRPL9
C19orf48
HSPA9
NNAT
BLCAP
NME6
IPO13
POLR2E
GPX4
SUCLG1
UBE2I
TAOK3
SUDS3
CAPRIN1
EXOSC5
BCKDHA
SLC35B1
FAM187A
EFTUD2
CCDC103
RWDD1
ZNF576
IRGQ
MRPS5
ACTR10
RBBP5
COX7A2L
DCTN1
VTI1B
PSMD1
CDC73
PES1
SEC61B
ALG2
COMMD1
CCT4
SART3
ISCU
UPF2
HADHB
HADHA
LYRM4
FARS2
RABGGTB
TSNAX
PSMG2
CEP76
FARSB
NDUFA4
PDAP1
BUD31
STAM
PI4KB
MTRNR2L8
SUPV3L1
NUP205
MTRNR2L1
STAM2
SKP1
PNO1
RPL21
USP1
ZRANB2
IER3
FLOT1
PAK1IP1
C6orf52
ATP5MG
GOLGA5
PHF23
GABARAP
DVL2
SELENOF
HS2ST1
VARS1
GADD45GIP1
VPS52
RPS18
B3GALT4
HSPA1B
MYC
PTGES2
RPL26
KRBA2
TAF9
RAD17
AK6
ANAPC7
ZWILCH
SNAPC5
RPL4
RPS27A
CLHC1
PDHX
APIP
AXDND1
NFKBIL1
DDX39B
ATP6V1G2
EIF2S3
SMC2
SFI1
EIF4ENIF1
MRTO4
EMC1
TTC8
PIN4
ZC3H10
RPL41
ESYT1
TSSK4
TM9SF1
IPO4
RPL35A
LMLN
IQCG
TMED1
ZBTB37
RPS11
RPL13A
C6orf226
RPS23
ATP6AP1L
WDR74
SLC3A2
TM4SF1
ATP5F1E
PRELID3B
VPS28
ADK
AP3M1
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
PCBP1
DPH6
RPL27A
MAT2A
SF3B3
COG4
H2BC4
H2AC6
OR6B2
NDUFA10
SCRIB
RXYLT1
ATP6V0C
AMDHD2
BICRA
SUMF2
RBKS
BABAM2
SYCE2
NRAS
TRIM65
MRPL38
H4C12
H4C11
H2BC15
H2AC15
EIF4A2
RPL22L1
RPS12
H2BC14
H2AC14
PTPN6
C12orf57
ATN1
GLRX2
UFM1
DENR
XPNPEP3
ST13
DNAJB7
DGKZ
RPL17-C18orf32
RPL17
C18orf32
PEAK3
OAZ1
FAM104A
C17orf80
C6orf47
BAG6
APOM
PACSIN3
ARFGAP2
MED1
CDK12
SHC1
PYGO2
PBXIP1
LOC101928120
EDC4
MPDU1
LOC100996842
EIF4A1
CD68
DDIT4
RPS5
RNF225
HDGF
MRPL24
PAF1
GORAB
MTRNR2L2
MSH3
DHFR
P4HB
ARHGDIA
RPN1
PROSER1
NHLRC3
SYNRG
PCBD2
ANKLE2
ALKBH5
H4C3
H1-6
DUX4
PTMA
RPL37
H1-2
H3C3
UBE2M
CHMP2A
GTF3C4
DDX31
MRPS16
DNAJC9
GET4
H2BC21
H2AC21
H2AC20
RPS2
RPL3L
RNF151
NDUFB10
RNASEK
C17orf49
BCL6B
FADD
PRKAG1
EXOSC6
ABTB1
WDR46
RGL2
PFDN6
H2BC5
H1-4
MSH5
MPIG6B
LY6G6C
DDAH2
CLIC1
LAMP1
PRDX2
JUNB
SIRT7
PCYT2
MAFG
RPS29
LRR1
INPP5E
SRSF11
RPL12
LRSAM1
LRRC40
ZNF34
RPL8
MRPL2
KLC4
CUL7
TBCK
AIMP1
RPL3
CIRBP
HNRNPA1
CBX5
NFE2
CMTR1
RPL7
RDH10
VPS9D1
NDST2
POLG2
DDX5
SYNGAP1
PHF1
CUTA
STK36
RNF25
FAM131A
ZCWPW1
PPP1R35
MEPCE
EPN1
PRRT2
MAZ
PAGR1
MVP
CISD3
BNIP3
CNPY2
TUBB
MDC1
RPL10
DNASE1L1
NRIP1
RIT1
RHBDL1
RHOT2
RGS14
LMAN2
VARS2
GTF2H4
SPHK2
SPACA4
RPL18
FAM83E
RPS10-NUDT3
RPS10
MRI1
C19orf53
ID3
PRKRIP1
SURF6
ZBTB45
SLC27A5
TRAP1
PFDN5
MYG1
ZNF581
ZNF580
CCDC106
NAPRT
MROH6
TSC22D1
TTC33
TTYH2
RPL38
ZNF585B
ZNF383
RAD23A
CALR
BTBD10
GPAA1
EXOSC4
SLC25A11
RNF167
PFN1
ENO3
MRPS18B
ATAT1
MSH4
RRP36
MEA1
KLHDC3
TIMM13
CCDC34
SMG5
TMEM79
POLDIP3
SGK1
SEC11C
H2AZ1
DNAJB14
SGSM3
WDR90
FOXD3
RPL19
CACNB1
AGAP11
ADIRF
FLYWCH1
LOC105372440
ACP4
SLC39A13
HMCES
HOXA3
RACK1
RICTOR
HOXA6
HOXA5
MOV10
RPLP0
GCN1
RPL6
ARHGAP11A-SCG5
ARHGAP11A
EEF1A1
PIP4P1
OSGEP
APEX1
MMP24OS
MMP24-AS1-EDEM2
C19orf71
MRM1
DHRS11
RPL13
CPNE7
TMPPE
GLB1
RCOR3
ID1
CD320
CLUAP1
C16orf90
SECISBP2
CKS2
SPCS1
GLT8D1
ECI1
HES7
ALOXE3
POLD1
NR1H2
SMIM22
ROGDI
SF3A3
FUT11
CHCHD1
DPH7
POLR2J3
TMSB10
VIM
VWA7
ARF3
LRRC37A3
CENPBD1
ATXN2
PPARA
H4-16
H2AJ
TSEN54
LLGL2
CASKIN2
NAA10
ARHGAP4
RECQL4
LRRC14
LRRC24
C8orf82
ELP5
CTDNEP1
STYXL1
NOP53
SLC25A10
MRPL12
ACTB
FTH1
BEST1
H4C8
MRPL34
DDA1
ABHD8
TUBGCP6
HDAC10
GGA2
WDR24
STUB1
JMJD8
MOGS
MRPL53
JMJD7-PLA2G4B
JMJD7
CD79A
GP1BA
TSKU
CELF1
ZMIZ2
TRIP4
PCLAF
RHOB
COMT
STRIP1
TXNRD2
HCN2
PSMD5
NAT10
FAM174C
SCAMP3
FAM189B
CCAR2
C8orf58
GNG14
DHPS
GTF2IRD2B
POMZP3
GPS2
EIF5A
CYBA
TBC1D13
DBP
SLC26A11
SGSH
NDUFAF3
DALRD3
NDUFS3
KBTBD4
FAM180B
TRIP6
SRRT
BAZ2A
ATP5F1B
WDR6
NUF2
H4C13
H3C11
H2AC16
H1-5
NDUFS7
ARHGEF1
LDHC
TMEM107
ABHD17A
PUF60
COMMD2
PNMA1
MAP2K2
CARD6
MRPL40
HIRA
H3C13
H2BC18
CDK11A
ADPRHL1
SLC39A7
RXRB
RING1
HSD17B8
CRELD1
H4C2
H3C2
H2AC4
H4C1
H3C1
H1-1
NOP14
GRK4
SIGMAR1
ARID3C
SIX5
DMPK
TOB1
TSPAN10
NPLOC4
H4C9
H2BC11
H2AC11
ACTL10
NECAB3
DRAP1
C11orf68
LRP6
NOTCH2NLA
XRN1
TFAP2A
IDH3B
ABCB6
CS
PDCD6
ERCC1
TUBA1B
DPY19L4
TCHP
NUDT1
MRM2
MAD1L1
NPAS4
NDUFA4L2
SHMT2
LIFR
WDR70
NUP155
MAPK8IP3
TMEM43
CHCHD4
PAIP1
SELENOH
POLR2J
ARHGAP12
ZNF446
ZNF324
GNG3
BSCL2
ISG20
ZNF653
GRAMD2A
ASB13
SCAP
C5orf24
AURKAIP1
ERGIC2
GPN2
RCE1
LBR
ZNF341
TATDN3
NSL1
H2BC12
H2AC12
FLOT2
DHRS13
RNF166
CTU2
SDE2
CHD2
CBX4
C7orf26
PRDM10
TMEM250
ZNF770
GAPDH
TAOK2
PMF1-BGLAP
PMF1
AKAP8
THOC5
ZFP36
PLEKHG2
TRIP13
BRD9
STOML2
PIGO
NXF1
GFAP
HNRNPU
CSNK1G1
DNAJB12
NCBP3
SDHA
CCDC127
ABCF1
KIF2C
TMEM267
NFAT5
FBXW9
VPS50
HEPACAM2
CTDSP1
MRPS34
EME2
NME3
SPSB3
TRAPPC9
SCAMP5
EAPP
DIDO1
ERCC6L2
SSBP1
SRF
CUL9
PPIB
SNX22
ECHS1
WDR47
H4C5
H3C4
H2BC7
H2AC7
MATR3
SLC16A3
SMN2
SMN1
TAF12
SHTN1
TMEM39B
C16orf46
MAMDC2
POLR2C
CHD8
EHMT1
BCAP29
PACS1
PCBP2
CCDC138
SLC39A1
CRTC2
CREB3L4
RAB5B
PMEL
CDK2
GRB2
COX20
ASXL1
RUVBL1
EEFSEC
ZDHHC23
NELFA
URM1
SETD1A
ORAI3
MARCHF6
PURA
ANKFY1
SPATA25
NEURL2
CTSA
SMDT1
PHETA2
NAGA
CCDC43
GSTA4
ZSWIM1
CTNNB1
MTF2
TOMM20
MYO18A
LPCAT1
CCDC86
GADD45B
TMSB4X
DSTYK
ZNF511
TUBGCP2
HPS6
ARMH3
TUBA1C
IREB2
TRMT2A
RANBP1
MEMO1
TXN2
GBA
GAA
MTIF2
SPATC1L
TYSND1
ROPN1L
OTUD7B
TMED9
B4GALT7
GTPBP6
TMEM262
PTCD1
CPSF4
RAB3IL1
FHL3
MDM4
NOTCH2
RAC3
DCXR
SLC15A4
CDC5L
HMGA1
PHF2
ATG4D
SMIM29
TCF3
AHRR
RMI1
HNRNPK
TOM1
HAGHL
CCDC78
ANTKMT
METRN
THEM4
NOP2
DRG2
TOMM6
PRICKLE4
FRS3
EIF3F
PDCL3
ILF2
NPR1
NOLC1
CYB561D1
NME4
DECR2
ATXN7L2
RAD9A
PPP1CA
EXOC3
MRPS23
TLCD1
RPL23A
RAB34
NEK8
GPANK1
CSNK2B
NAA80
IFRD2
HYAL3
HYAL1
EIF2D
SEMA4A
NDUFB2
TRAF7
RAB26
CHD1L
PRKAB2
SKA3
MRPL57
RPS28
NDUFA7
CYRIB
PCBP4
ABHD14B
ABHD14A-ACY1
ABHD14A
SLURP1
KRT18
TRAF4
PPIA
NT5C
UBE2H
FBF1
ADM
TAF2
HES3
ICMT
KLHL12
RPP40
TAS1R1
NOL9
BRIX1
ZC3H12A
TRIM37
BHLHE40
NSFL1C
BSPRY
PPP1R1B
NEUROD2
SLC29A1
MYMX
OSMR
TNFRSF12A
THOC6
HCFC1R1
CLDN6
CLCN7
TGOLN2
LRRC59
ZNF286A
GSTO2
TSFM
ZNF358
MCOLN1
CALM1
JOSD2
ASPDH
TMEM139
CASP2
RNPS1
VEZF1
SNAP47
JMJD4
ZNF76
KLHL15
AFF4
CLPTM1L
SLC39A4
CPSF1
ZNF583
CYB561
HASPIN
CSRNP2
RDH5
CD63
DCP1A
GPX1
SSX2IP
ANKRD13C
SCNN1A
LTBR
TDP2
ACOT13
SFXN4
SYT7
GABPB2
STX5
RPLP1
AKAP1
RSAD1
CHAD
RBL1
SLC50A1
EFNA1
MAN2C1
DPM3
UPF3A
RIPK1
SLC45A4
PABPN1
PDPK1
CEMP1
CCDC130
MADD
RPSA
RPL27
IFI35
AGL
WDR11
SNTB2
EPHB4
AGO3
CFD
ROM1
EML3
B3GAT3
RABIF
AMZ2
FAM162A
CCDC58
FKBP5
SUGCT
MPLKIP
TMEM170A
RPS26
NOC3L
TMEM223
TMEM179B
GADD45A
KDM6B
CIAO3
CLDN15
BAX
FIS1
RGS20
ATP6V1H
PRSS8
CXorf38
RELA
USP21
UFC1
PPOX
ATAD2
NOTCH2NLC
NR4A1
WASHC2A
TRIOBP
H3C6
H2BC8
H2AC8
EIF4H
NAA60
MBTPS2
ENDOV
LARP1
H3C8
H2BC10
FAM156B
FAM156A
DNAJC25-GNG10
DNAJC25
ENOSF1
HNRNPA1L2
IRF9
HMGB1
YAP1
GNE
ZNF296
GEMIN7
TMEM249
SLC52A2
FBXL6
USPL1
DAGLA
SH3GL1
CHAF1A
BRWD1
FOSL1
FIBP
CCDC85B
SLC35B2
HSP90AB1
TRIM47
TIPIN
ERBB3
INPP5K
RASA4B