ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9237245 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX10448664: HeLa

◢ SRX10448665: HeLa

◢ SRX10448666: HeLa

◢ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◣ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

FRG2C
DUX4
MTRNR2L1
LOC102724770
DGCR6
ART1
FRG2
ZNF335
POLR3F
DZANK1
UGT1A4
UGT1A3
HMGB1
TMEM242
MAPKAPK5
CACTIN
SMIM14
PHRF1
TSN
LYRM4
FARS2
IPO13
C19orf48
SLC35B1
NUP205
SRD5A1
NVL
PSMG2
CEP76
LRRC6
MTRNR2L2
MSH3
DHFR
SUCLG1
TBCK
AIMP1
ZNF576
IRGQ
VDAC2
GTPBP6
CCDC200
HADHB
HADHA
PAK1IP1
C6orf52
HSPA9
DEFA5
TAOK3
SUDS3
CRYAA2
CRYAA
GAGE2C
GAGE2B
GAGE2A
GAGE1
RBBP5
UPF2
RWDD1
EXOSC5
BCKDHA
FAM187A
EFTUD2
CCDC103
NOP14
GRK4
RPS27A
CLHC1
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12F
GAGE12B
ATP5MG
BRWD1
TXNIP
USP29
TSNAX
SERPINB5
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
PCBP1
RGS19
OPRL1
LKAAEAR1
RPL21
NUP85
NFKBIL1
DDX39B
ATP6V1G2
USP17L22
USP17L21
USP17L20
USP17L12
STAM
MRPS7
MIF4GD
GGA3
SUPV3L1
STAM2
ZRANB2
NME6
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
OAZ3
MRPL9
NDUFA4
COL23A1
GAGE8
GAGE2E
GAGE2D
GAGE13
GAGE12D
GAGE12G
GAGE12J
RCC1
FTH1
BEST1
VPREB1
WDR74
STX5
TOP1MT
TSPOAP1
MUC3A
HMBS
DPAGT1
H2AX
ZC3H10
RPL41
ESYT1
GH1
CSHL1
RABL2B
VPS52
RPS18
B3GALT4
C6orf226
PGK1
RABL2A
PHF23
GABARAP
DVL2
H4C12
H4C11
H2BC4
H2AC6
ZWILCH
SNAPC5
RPL4
EDC4
VPS28
H4C9
H2BC11
H2AC11
RPL17-C18orf32
RPL17
C18orf32
H2BC15
H2AC15
VTI1B
SYCE2
DYNC1LI2
RPL26
KRBA2
ICE1
SUMF2
UBE2M
CHMP2A
H2AZ1
DNAJB14
H2BC14
H2AC14
IER3
FLOT1
VEZF1
COX20
SYNGAP1
PHF1
CUTA
SCRIB
MYC
H4C3
H1-6
H2BC5
H1-4
PRRT2
MAZ
SYNRG
GNG14
NRAS
REXO1
MRPS18B
ATAT1
POLG2
DDX5
DHPS
PRDX2
JUNB
H2BC21
H2AC21
H2AC20
PSMD12
MTRNR2L8
MPDU1
LOC100996842
EIF4A1
CD68
MRI1
C19orf53
ATP6V0C
AMDHD2
RRP36
MEA1
KLHDC3
MRPS16
DNAJC9
S1PR4
NCLN
H1-2
CAPRIN1
ZNF34
RPL8
UBE2I
NDUFAF3
DALRD3
ID3
POLR2E
GPX4
MRPL2
KLC4
CUL7
EIF4A2
FAM131A
H3C3
NAT10
PAGR1
H4C2
H3C2
H2AC4
GOSR2
H4C1
CIRBP
SECISBP2
CKS2
EPN1
RIT1
MSH4
AKAP8
PACSIN3
ARFGAP2
RABGGTB
FAM174C
H4-16
H2AJ
H3C1
H1-1
CHD2
IFITM3
IFITM1
PTPN6
C12orf57
ATN1
ZBTB37
RPL22L1
H2BC12
H2AC12
CTDSP1
DCTN1
INPP5E
VARS1
MVP
NNAT
BLCAP
ATP5F1E
SLC3A2
C6orf47
BAG6
APOM
IFITM2
DDIT4
RPS11
MRPS5
RAD23A
CALR
JMJD7-PLA2G4B
JMJD7
ABTB1
RHOB
PTMA
RHBDL1
STX10
IER2
RPS2
RPL3L
RNF151
NDUFB10
TLCD1
RPL23A
RAB34
NEK8
ZNF581
ZNF580
CCDC106
H3C13
H2BC18
PSMD1
HNRNPA1
CBX5
TSSK4
ACTR10
CDC73
GGA2
COX7A2L
WDR24
STUB1
JMJD8
PRKAG1
POLR2J3
SLC38A2
RNASEK
HES7
ALOXE3
SOX15
RPLP0
GCN1
COMMD1
CCT4
MSH5
MPIG6B
LY6G6C
DDAH2
CLIC1
EEF1A1
PFDN5
MYG1
C17orf49
BCL6B
TUBB
MDC1
GPAA1
EXOSC4
GADD45B
CXorf38
RPL13A
SEC61B
ALG2
SCAMP3
FAM189B
P4HB
IER5L
RPL27A
SIRT7
PCYT2
MAFG
ADM
SLC39A7
RXRB
RING1
HSD17B8
NAA10
ARHGAP4
PRKRIP1
DPH7
KMT5B
NADSYN1
DHCR7
SART3
RPS23
ISCU
ATP6AP1L
NFE2
ARHGDIA
PI4KB
TMEM107
RELA
WDR37
IDI1
MRM1
DHRS11
MRPL40
HIRA
TMSB4X
SKP1
H4C6
GPN2
MOGS
RPL13
RABL6
CCDC183
SHC1
PYGO2
PBXIP1
LOC101928120
ZNF653
WDR6
PDE4A
FAM228B
SRSF11
TRIM8
ZBTB45
SLC27A5
USP1
CPNE7
PDAP1
BUD31
PES1
MAT2A
TP53I3
SF3B6
SGSM3
CDK11A
RPL35A
LMLN
IQCG
UCKL1
MRPL53
EPN2
DAPK3
PTGES2
FLOT2
DHRS13
SGK1
TBK1
POMZP3
HMCES
CCDC34
NUDT1
MRM2
MAD1L1
IRF2BP2
SNAP47
JMJD4
E2F3
H4C7
H3C7
H2BC9
H4C5
H3C6
H3C4
H2BC7
H2AC7
FARSB
TUSC2
RASSF1
EIF2S3
GRAMD2A
VAMP2
TMEM230
PCNA
NOP53
TM9SF1
IPO4
TMEM132A
HYAL2
TIMM13
ZFP36L1
DONSON
KMT2A
SH3BGRL3
HDGF
FLYWCH1
GET4
SFI1
EIF4ENIF1
ZNF446
ZNF324
MMP24OS
MMP24-AS1-EDEM2
FUT11
CHCHD1
TAF9
RAD17
AK6
MID1IP1
SIT1
MOV10
CCDC107
ARHGEF39
ADK
NDST2
PSMG1
ZNF628
NAT14
MAPK8IP3
BTNL9
C5orf24
SELENOF
HS2ST1
H3C12
H2BC17
H2AC17
MAML1
PEAK3
OAZ1
EFNA2
SSC5D
MT2A
TOM1
H4C4
CCDC24
COX18
VPS9D1
TM4SF1
PNO1
SLC25A11
RNF167
PFN1
ENO3
STPG3
FAM166A
GTF2A2
PIN4
WDR90
IKBKG
G6PD
SIX5
HMGN2
DMPK
RPL12
LRSAM1
TMSB10
GAPDH
FTL
NOLC1
NANOS1
GPANK1
CSNK2B
SLC25A10
MRPL12
HSPA1B
STAG1
MRPL24
ID1
PDHX
APIP
KIF2C
H2BC8
H2AC8
CAPNS1
LOC105372440
ACP4
ZNF48
AXDND1
RPS28
NDUFA7
INTS5
GANAB
DYRK1B
ACTL10
ADGRA1
TRIM37
BAZ2A
NECAB3
WDR46
RGL2
PFDN6
RPS29
RPS5
RECQL4
LRRC14
ZFX
CYRIB
LRRC24
C8orf82
WBP1
INO80B
IGF2BP3
CDH24
SLC50A1
EFNA1
SPATC1L
CD79A
SCFD1
FOSL1
FIBP
CCDC85B
ARHGEF1
ARHGAP39
SETD1A
ORAI3
NPM3
FGF8
VWA7
GADD45GIP1
NXF1
TNFRSF12A
THOC6
HCFC1R1
CLDN6
CDK16
AVPI1
SURF6
H3C10
H2BC13
H2AC13
PNMA1
VARS2
GTF2H4
GMPPB
AMIGO3
MDP1
CHMP4A
EXOSC6
PARP16
TAF10
RRP8
ILK
TPP1
THAP9
SEC31A
TUBGCP6
PHLDA1
HDAC10
PDCD2L
PCBD2
ZNF513
SLC25A6
RCOR3
UQCC3
LBHD1
CCDC138
TEDC2
RPL37
CISD3
TMED1
FBF1
UBC
MAN2C1
SLC39A4
CSKMT
C11orf98
PIP4K2B
DRAP1
C11orf68
TRIM65
ZNF771
XRN1
PCBP4
ABHD14B
ABHD14A-ACY1
ABHD14A
UNK
NELFB
H3-3B
H4C8
ANAPC7
CD320
ATP5F1B
SELENOH
LDHC
POLD1
NR1H2
RPL35
RPL3
ARPC5L
SPOUT1
CDC42EP1
MRPL38
GOLGA5
SNX17
RPL10
HAGHL
DNASE1L1
CCDC78
ANTKMT
NKIRAS1
CEBPB
RCE1
KLHL11
UBTF
GSTO2
MTA2
TSC22D1
SP3
TUBB4B
MT1M
MT1E
TSEN54
MRPS34
LLGL2
FADS2
FADS1
EME2
RHOT2
RPS15A
SNX14
BAG2
TUT1
EIF1
RXYLT1
TYSND1
MRPL28
ECI1
DPM3
SNAPC4
EIF2B4
TARBP2
MAP3K12
MRTO4
EMC1
METRN
PIP5KL1
NME3
DPM2
MAF1
IMPDH2
SMC2
NAPRT
MROH6
MAMDC2
SPHK2
TMEM223
TMEM179B
STYX
TTC33
LAMP1
INPP5K
HAX1
SPACA4
RPL18
FAM83E
ZGLP1
UPF3A
FDX2
HPDL
C7orf26
BICRA
CELF1
WDR45
PRAF2
ELK1
YJU2
CASKIN2
TYMP
SCO2
ODF3B
H3-3A
ALLC
WDR97
MLLT6
WDR38
OGFOD2
ARL6IP4
TFAP2A
P2RY11
EIF3G
MST1
TTC8
BTBD18
CYB561D1
GLRX2
GATD3B
GATD3A
NRIP1
CDKN1C
MLX
COASY
NDUFS3
MATR3
KBTBD4
FAM180B
FNBP1
GAS2L1
ROPN1L
TOB2
LMNB1
PRELID3B
SRSF4
PPAN-P2RY11
PPAN
RSRP1
DPH6
RBM4
ARID5B
GPS2
EIF5A
GTF2IRD2B
FADD
DUSP2
ASTL
ISL2
IDH3B
SCARF1
RILP
THOC5
OR6B2
NDUFA10
MED1
CDK12
RPS12
LARP1
USP21
UFC1
PPOX
IGF1R
RPL7
RDH10
PROCA1
CTNNAL1
DYNLL1
GTF3C4
DDX31
ARF3
SLC39A1
CRTC2
CREB3L4
SLC25A39
TRABD
SNX9
MARCHF6
HOXA3
ZNF35
SLC35A2
PIM2
FAM104A
C17orf80
TRIP6
SRRT
VPS4A
TMEM109
ZBTB26
RABGAP1
CITED4
RNF225
PABPN1
SAR1A
ZNRD2
FAM89B
EHBP1L1
RAB40C
ICA1L
NAA80
IFRD2
HYAL3
ANAPC4
UBB
KIF27
ZBTB12
EHMT2
C2
TTYH2
RPL38
ABCB6
ATXN2
RBKS
BABAM2
WDR81
DENR
RPN1
AGO3
TSC1
PYCR3
GFI1B
PHOX2A
NFKBIA
TAOK2
RPL15
CENPA
TUBA1B
RPL6
PIDD1
TSKU
GFAP
TIGD5
EEF1D
BCAP29
APOLD1
SYF2
PATZ1
CALM2
CNPY2
NOXO1
ABHD17A
URGCP
SPEN
GMEB2
RPEL1
MEMO1
POLR2C
ZNF865
ZNF524
SFN
FIZ1
ZBTB22
TAPBP
DAXX
FAM210B
FBXO4
FSTL3
LY6L
LGALS2
C16orf46
DENND4B
PCF11
URGCP-MRPS24
CDKN1B
ENAH
CNOT3
NME4
DECR2
SLC35B2
HSP90AB1
ABCF3
SPDYE5
POM121C
LRP6
CAMK2N2
SAMD1
PWP2
LOC102724159
C19orf67
SRCAP
LOC730183
SLC12A6
PRMT3
NUTM1
NOP10
SLC25A22
VIM
MFSD3
RACK1
TLL2
PPFIA4
PACS1
PNRC1
LENG9
HMGA1
H2BU1
H2AW
EAPP
RPL19
MYL6B
MYL6
CACNB1
BRF2
ZCWPW1
PPP1R35
MEPCE
ST3GAL3
USP34
CCDC97
GINS2
ATF4
PPP1R37
PRDM10
ADNP
SMIM22
ROGDI
GAMT
ZNHIT2
TM7SF2
FAU
ROMO1
NFS1
SFT2D3
LRRC37A3
SEC14L1
RABGEF1
H3C8
H2BC10
PROSER1
NHLRC3
CRK
GFER
HNRNPU
MVB12A
TMPPE
GLB1
S100A6
S100A5
C19orf71
SLC25A42
AP3M1
PLPP5
CELSR3
BAHCC1
SREBF2
TIGD3
PGP
PAXBP1
CS
SELENOO
SLC5A5
RPL18A
PPP3CB
CRELD1
ATXN7L2
THEM6
CACFD1