ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10448667 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX10448664: HeLa

◢ SRX10448665: HeLa

◢ SRX10448666: HeLa

◣ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

PGK1
C6orf226
SYCE2
GNG14
DHPS
PHF23
GABARAP
DVL2
MRPS18B
ATAT1
ZC3H10
RPL41
ESYT1
MRI1
C19orf53
RPL26
KRBA2
EPN2
SYNGAP1
PHF1
CUTA
H2BC4
H2AC6
H4C3
H1-6
EDC4
RPL17-C18orf32
RPL17
C18orf32
MSH5
MPIG6B
LY6G6C
DDAH2
CLIC1
NRAS
JMJD7-PLA2G4B
JMJD7
UBE2M
CHMP2A
MRPS16
DNAJC9
H4C12
H4C11
H2BC15
H2AC15
SYNRG
VPS28
TMEM107
VAMP2
ZFP36L1
H2BC14
H2AC14
VPS52
RPS18
B3GALT4
H4C9
H2BC11
H2AC11
SCRIB
SUMF2
NADSYN1
DHCR7
RPL22L1
FAM131A
GPN2
H4-16
H2AJ
MRPL2
KLC4
CUL7
COX20
NDUFAF3
DALRD3
WDR6
PRRT2
MAZ
MOGS
MRPL53
GADD45B
NAT10
PACSIN3
ARFGAP2
IFITM3
IFITM1
IFITM2
PDE4A
ADM
ID3
CXorf38
H4C6
H4C7
H3C7
H2BC9
RHOB
IER5L
CHD2
FAM228B
TP53I3
SF3B6
PTPN6
C12orf57
ATN1
PRDX2
JUNB
MPDU1
LOC100996842
EIF4A1
CD68
SOX15
ZWILCH
SNAPC5
RPL4
VTI1B
ATP6V0C
AMDHD2
FOSL1
FIBP
CCDC85B
IKBKG
G6PD
SLC38A2
RELA
VEZF1
GGA2
SLC39A7
RXRB
RING1
HSD17B8
SCAMP3
FAM189B
STAG1
TUSC2
RASSF1
HYAL2
SIT1
CCDC107
ARHGEF39
PARP16
H4C2
H3C2
H2AC4
H4C1
H3C1
H1-1
POLG2
DDX5
ABTB1
H2BC12
H2AC12
PFDN5
MYG1
HES7
ALOXE3
ZNF628
NAT14
SSC5D
H2AZ1
DNAJB14
RIT1
H2BC5
H1-4
MSH4
RABGGTB
ISL2
E2F3
ZNF653
INPP5E
H1-2
H3C3
PRKRIP1
GTF2A2
STX10
IER2
SAR1A
RPS2
RPL3L
RNF151
NDUFB10
CAPNS1
FRG2C
AKAP8
TNFRSF12A
THOC6
HCFC1R1
CLDN6
PRKAG1
KIF2C
MT2A
ZNF34
RPL8
MID1IP1
CDK11A
MRPL40
HIRA
MT1M
MT1E
C6orf47
BAG6
APOM
GPANK1
CSNK2B
LY6G5B
TUBB
MDC1
CITED4
DUX4
NOP53
DYNLL1
H2BC21
H2AC21
H2AC20
RAD23A
CALR
HPDL
MUTYH
TMSB4X
FLOT2
DHRS13
H3C6
FLYWCH1
H2BC8
H2AC8
EIF4A2
MTA2
TUT1
IGF2BP3
MYC
TRIM8
SIRT7
PCYT2
MAFG
RRP36
MEA1
KLHDC3
P4HB
ARHGDIA
WDR45
PRAF2
EEF1A1
ZNF581
ZNF580
CCDC106
SECISBP2
CKS2
ZNF446
ZNF324
CYRIB
DDIT4
HNRNPA1
CBX5
SH3BGRL3
NAA10
ARHGAP4
PAGR1
MVP
HMBS
DPAGT1
H2AX
ARID5B
VARS2
GTF2H4
HMCES
GTPBP6
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
FUT11
CHCHD1
SCFD1
WBP1
INO80B
FTL
RPL13
CPNE7
FTH1
BEST1
MOV10
TRIM37
SPOUT1
WDR74
SLC3A2
CDK16
H3C13
H2BC18
CCDC24
RPS28
NDUFA7
CDH24
EPN1
TMSB10
IER3
FLOT1
VIM
RPL27A
STPG3
FAM166A
NELFB
TUBB4B
TBK1
UQCC3
LBHD1
CSKMT
C11orf98
POMZP3
CCDC34
CDKN1C
TSSK4
MDP1
CHMP4A
POLD1
NR1H2
FADS2
FADS1
LDHC
MTRNR2L1
RPS23
ATP6AP1L
SLC25A39
ID1
PTMA
GMPPB
AMIGO3
CD320
CDC42EP1
LGALS2
DONSON
PSMG1
MST1
KMT5B
ELK1
RAB40C
SPEN
PATZ1
UCKL1
GINS2
TLL2
CIRBP
FAM174C
IRF2BP2
TCTEX1D2
RPS11
RPL13A
ANKH
TEDC2
TRMT112
PRDX5
ESRRA
ATF4
H4C5
H3C4
H2BC7
H2AC7
NXF1
PDCD2L
WDR81
TLCD2
PCF11
IRF2BP1
ZNF48
ZNF771
SLC35A2
PIM2
VWA7
RPS15A
UBTF
SORBS2
INTS5
GANAB
CTDSP1
HMGN2
C5orf24
PHLDA1
TSKU
SFN
ZBTB37
TOM1
H4C4
NOLC1
MYNN
ACTRT3
SNX14
LMNB1
SNAP47
JMJD4
SGK1
KLHL11
FAM210B
CD79A
ARHGEF1
GMEB2
ZNRD2
FAM89B
EHBP1L1
INPP5K
GATD3B
GATD3A
SHC1
PYGO2
PBXIP1
LOC101928120
S100A6
S100A5
NUDT1
MRM2
MAD1L1
GPAA1
EXOSC4
SGSM3
PHOX2A
MATR3
ZBTB45
SLC27A5
MAT2A
SLC39A4
NPM3
FGF8
IGF1R
RCC1
ING1
CARS2
STYX
CAMK2N2
METTL8
DCAF17
SRSF11
TOB2
H3C12
H2BC17
H2AC17
WDR90
ZFX
RNASEK
C17orf49
BCL6B
RPL10
DNASE1L1
SLC25A11
RNF167
PFN1
ENO3
ARHGAP39
DUSP2
ASTL
RPL12
LRSAM1
NDST2
GFAP
RPL35A
LMLN
IQCG
JADE2
C8orf37
WDR46
RGL2
PFDN6
UBB
TSEN54
LLGL2
CASKIN2
MTIF3
SP3
RPL37
GSTO2
BORCS6
LARP1
HMGA1
RPL35
ARPC5L
H1-10
POLR3D
UBC
PHF8
EIF1
GAS2L1
HAX1
SFT2D3
SNAPC4
PNRC1
DUSP5
PMPCA
ENTR1
CCDC200
MAPK8IP3
COX18
SIX5
DMPK
GAPDH
ANAPC4
GINS3
WBP1L
VEGFB
TRPT1
NUDT22
DNAJC4
DNAJB4
SLC5A5
RPL18A
PCBP1
MRM1
DHRS11
RBM4
TTLL3
ILF3
GET4
CEBPB
ICA1L
RHBDL1
WDR24
STUB1
JMJD8
BAZ2A
ATP5F1B
KRT10
TIMM13
DPH7
JUN
OGFOD2
ARL6IP4
RPS29
NAPRT
MROH6
PWP2
LOC102724159
TRIM25
TEX45
TYMP
SCO2
ODF3B
FRG2
VGF
NAT16
TRIM45
GRAMD2A
FBF1
GTF2A1
DAPK3
BRF2
SURF6
FSTL3
MLLT6
IDH3B
TIMMDC1
MVB12A
NFE2
ACVR2B
SPHK2
SPACA4
RPL18
FAM83E
PHLDA2
TYSND1
TMEM132A
BAG2
TMEM109
SMG9
SLC25A6
TLE3
PRKDC
MCM4
ZGLP1
FDX2
TUBGCP6
HDAC10
SCARF1
RILP
PYCR3
TIGD5
EEF1D
USP34
UNK
H3-3B
TBR1
CHD5
FIGN
TSC22D1
UAP1L1
MAN1B1
DYRK1B
MTMR10
NKIRAS1
RPL15
ZCCHC14
SELENOH
BTBD18
ABCB6
RSRP1
NAA80
IFRD2
HYAL3
SYF2
REEP4
HR
IMPDH2
ADK
NOL3
HSF4
TRADD
FBXL8
MAML1
APOLD1
CDKN1B
TM4SF1
PIP5KL1
DPM2
MAF1
WDR97
WDR38
H3C10
H2BC13
H2AC13
ABCF3
ROPN1L
IRX3
PNMA1
ETV6
NPRL3
RPL3
ARF3
C19orf71
CEBPA
KIAA0895L
SGF29
DRAP1
C11orf68
XRN1
ATP5F1E
PRELID3B
PPP1R37
RAB23
CCDC138
FAM161A
CISD3
PRPF38B
ACTN4
TNNC2
UBE2C
SLC39A1
CRTC2
CREB3L4
C16orf46
CDC6
TMEM230
PCNA
PTAR1
TBC1D22A
PXDN
CCNT1
ZFP36
PLEKHG2
CXCR5
TEX49
PRMT3
LRP2BP
ANKRD37
ANKRD12
EFCAB13
TRIP6
SRRT
TMEM223
TMEM179B
PIDD1
SPDYE5
POM121C
SLC25A22
RPLP2
COA6
SHOX2
RSRC1
SREBF2
TNS2
SELENOI
ADGRF3
PCBP4
ABHD14B
ABHD14A-ACY1
ABHD14A
YIF1A
TMEM151A
RABGEF1
PMM1
PHF10
KLF6
H4C8
LENG9
SLC25A28
CEBPD
RECQL4
LRRC14
LRRC24
C8orf82
LONP1
CATSPERD
DPH2
B4GALT2
ATP6V0B
RPL19
CACNB1
SIGMAR1
ARID3C
ARID1B
SLC50A1
EFNA1
DPM3
SEMA4C
TCIM
NANOS1
EXOSC6
PIM1
MCCD1
SLC25A35
RANGRF
ZNF513
SNX17
EIF2B4
THOC5
RPLP0
GCN1
TTC33
HAGHL
CCDC78
ANTKMT
METRN
CALM2
MYL6B
MYL6
GPR137
NARF
CYBC1
KCNK4
BAD
SYP
PRICKLE3
SLC25A10
MRPL12
QSER1
CENPA
QTRT1
PANK1
CS
APTX
CAVIN3
RHOT2
LAMP1
NMT1
DCAKD
CPS1
CENPH
CCND1
LRP8
NME6
SETD1A
ORAI3
YWHAH
C22orf24
DPP3
YAP1
MARCHF6
CRK
ACACB
H3C8
H2BC10
N4BP2
SERINC4
SERF2
HYPK
MMP24OS
MMP24-AS1-EDEM2
ZNF35
TUBA1B
TFPT
PRPF31
RAB1B
FNBP1
POP5
PHF14
TAF4
MRPL28
TAF2
ZNF782
PEAK3
OAZ1
TAF10
RRP8
ILK
TPP1
MRPS34
EME2
NME3
KATNBL1
SLC30A7
EXTL2
P2RY11
EIF3G
PPAN-P2RY11
PPAN
XAB2
STXBP2
PCP2
CELF1
SRSF4
C1orf56
CSNK1G1
ROMO1
NFS1
ATG4D
MTFR2
LRRC25
GDF15
SNX5
MGME1
FOS
LEPROTL1
VPS9D1
NR4A2
ZNF451
PBLD
HNRNPH3
LRPPRC
ZBTB22
TAPBP
DAXX
PAIP2
CLN8
CEP192
POLR2H
CLCN2
RRAGC
DDAH1
CCN1
TAOK2
SIPA1
CHEK1
FANCC
HDAC7
AQP11
PMS1
ORMDL1
MLX
COASY
ADAT1
MICAL3
FERMT1
RCC2
C19orf48
LOC105372440
ACP4
MAN2C1
TPCN1
IQCD
PCMTD2
GRIN3B
ZDHHC5
SLC35B2
HSP90AB1
TRIM52
NFKBIE
MPHOSPH8
TRIM3
TIMM10B
ARFIP2
IL10RB
NCOA5
TUBA1C
SPAG9
MAP1LC3B
FBXO31
MNT
ZNF143
C1QBP
TFAM
PYROXD1
ISY1-RAB43
ISY1
LAG3
PTMS
PCBD2
ZBTB12
EHMT2
C2
SMTN
COX8A
MLXIP
BASP1
ZNF696
THEM6
OVCA2
SLURP1
SRCAP
LOC730183
SEMA3B
GAMT
TBC1D10B
MYLPF
SEPTIN1
GADD45A
RPL23
C17orf98
RRS1
ADHFE1
SRL
TPD52L2
ABHD16B
TTYH2
RPL38
THAP7
EID1
SEC14L1
CAPN15
HYKK
NFKBIA
RPS27A
CLHC1
PDF
NIP7
COG8
JOSD2
ASPDH
TLCD1
RPL23A
RAB34
NEK8
RABL6
CCDC183
PHF2
FOSB
ART1
PAXX
CLIC3
URB1
CSGALNACT1
C7orf26
NUDT17
SETD5
CFD
RPUSD1
CHTF18
ELANE
ATXN2L
IL34
ARF6
TYK2
GLE1
TYW1
SBDS
NDUFS3
KBTBD4
FAM180B
KLC2
JUND
IQCN
VAV2
MADD
XBP1
SETD1B
RHOF
CARD6
RNF115
POLR3C
CCM2
CERS5
UBL4A
SLC10A3
LAGE3
FAM156B
FAM156A
ZIC5
ZIC2
TBXA2R
GABARAPL1
RNF223
ARID2
MAP3K1
DNAJC21
SEC14L2
RNF215
TMEM243
SPRY1
USP8
DPY30
TNFSF13
SENP3
PNPLA6
NME4
DECR2
NCOA2
UNC13D
WBP2
TMEM242
PHPT1
AJM1
MED11
BCL6
MRPS7
MIF4GD
GGA3
ARID1A
CDK13