ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10448664 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◣ SRX10448664: HeLa

◢ SRX10448665: HeLa

◢ SRX10448666: HeLa

◢ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

MTRNR2L2
MSH3
DHFR
MTRNR2L1
FRG2C
ZC3H10
RPL41
ESYT1
DUX4
PGK1
IER3
FLOT1
H4C9
H2BC11
H2AC11
PRDX2
JUNB
MTRNR2L8
H2BC4
H2AC6
SYNGAP1
PHF1
CUTA
HES7
ALOXE3
PRRT2
MAZ
PHF23
GABARAP
DVL2
UBE2M
CHMP2A
MSH4
SYCE2
IFITM3
IFITM1
IFITM2
GNG14
DHPS
ADGRA1
SLC38A2
FRG2
H2BC5
H1-4
GTPBP6
TMEM242
ID3
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
NDUFAF3
DALRD3
WDR6
VPS52
RPS18
B3GALT4
H4-16
H2AJ
MYC
MPDU1
LOC100996842
EIF4A1
CD68
SOX15
NAT10
C6orf226
STX10
IER2
H4C12
H4C11
H2BC15
H2AC15
IER5L
CNOT3
MRPS18B
ATAT1
GADD45B
SIX5
DMPK
RPL17-C18orf32
RPL17
C18orf32
ART1
ADM
FTH1
BEST1
DDIT4
H4C3
H1-6
H4C2
H3C2
H2AC4
H4C1
H3C1
H1-1
PTMA
H2BC12
H2AC12
ZBTB45
SLC27A5
H2BC14
H2AC14
TMSB4X
GAPDH
RAD23A
CALR
RCC1
SYNRG
PSMG1
RHOB
EDC4
RPS28
NDUFA7
RPL26
KRBA2
C1QTNF8
RPS2
RPL3L
RNF151
NDUFB10
PACSIN3
ARFGAP2
EIF4A2
MRI1
C19orf53
JMJD7-PLA2G4B
JMJD7
SUMF2
MT2A
H2BC21
H2AC21
H2AC20
H2AZ1
DNAJB14
MRPS16
DNAJC9
P4HB
ARHGDIA
RELA
NPDC1
ENTPD2
PRKAG1
COL23A1
TUBB
MDC1
CEBPB
UCKL1
PTPN6
C12orf57
ATN1
GPAA1
EXOSC4
MID1IP1
DUSP2
ASTL
WDR74
SLC3A2
RPL12
LRSAM1
RPL13
CPNE7
LY6L
NOP53
ARHGAP39
RIT1
COX18
VPS28
ZNF34
RPL8
ABTB1
CLN8
H4C6
H4C7
H3C7
H2BC9
WDR46
RGL2
PFDN6
DAPK3
CCDC24
SLC50A1
EFNA1
DPM3
NRAS
PDCD2L
RPL22L1
GRAMD2A
VTI1B
TRIM8
ZWILCH
SNAPC5
RPL4
H3C12
H2BC17
H2AC17
FAM228B
TP53I3
SF3B6
RPS15A
UPF3A
MRPL28
RCE1
CCDC200
SLC25A11
RNF167
PFN1
ENO3
ZNF628
NAT14
SSC5D
SLC39A7
RXRB
RING1
HSD17B8
CFD
CDK11A
CCDC34
ZBTB12
EHMT2
C2
POLG2
DDX5
HNRNPA1
CBX5
NFE2
PAGR1
MVP
P2RY11
EIF3G
PPAN-P2RY11
PPAN
GAMT
IKBKG
G6PD
KMT5B
H3C6
H2BC8
H2AC8
RPL35
ARPC5L
WDR38
PFDN5
MYG1
SLC16A3
ZFX
ZNF48
ZNF771
ZBTB37
PDE4A
UBTF
MT1M
MT1E
H1-2
H3C3
VEZF1
EIF1
PHLDA1
MAML1
ADAMTS10
CHD2
SECISBP2
CKS2
ATP5F1E
ID1
GTF2A2
MAMDC2
BRF2
PIP5KL1
DPM2
FAM131A
SIT1
CCDC107
ARHGEF39
TMEM230
PCNA
CYRIB
CXorf38
RABL6
CCDC183
SCRIB
GMEB2
LDHC
PHOX2A
CTDSP1
MRM1
DHRS11
H4C5
H3C4
H2BC7
H2AC7
H4C4
BTNL9
NADSYN1
DHCR7
HMCES
FTL
SLC25A6
CRYAA2
CRYAA
MAF1
WDR97
MOGS
WBP1
INO80B
TNFRSF12A
THOC6
HCFC1R1
CLDN6
COX20
IDH3B
APOLD1
CDKN1B
TRIM37
OGFOD2
ARL6IP4
AKAP8
IGF2BP3
POMZP3
PHRF1
FLOT2
DHRS13
ZNF446
ZNF324
UNK
H3-3B
H1-10
AQP3
GGA2
YY1
CIRBP
FAM174C
SCAMP3
FAM189B
MRPL2
KLC4
CUL7
RSRP1
SYF2
INTS5
GANAB
RECQL4
LRRC14
SETD1A
ORAI3
MFSD3
GPT
CD79A
ARHGEF1
WDR37
IDI1
MTA2
TUT1
IRX3
SHC1
PYGO2
PBXIP1
LOC101928120
MAT2A
RRP36
MEA1
KLHDC3
HMBS
DPAGT1
H2AX
GPN2
FUT11
CHCHD1
GATD3B
GATD3A
HAGHL
CCDC78
ANTKMT
METRN
C6orf47
BAG6
APOM
GPANK1
CSNK2B
GSTO2
ATP6V0C
AMDHD2
TMSB10
CDK16
ANAPC4
RPS11
E2F3
H3C8
H2BC10
TOM1
H3C10
H2BC13
H2AC13
RPLP0
GCN1
SCFD1
CDC42EP1
ZBTB22
TAPBP
DAXX
LGALS2
RHBDL1
WDR24
STUB1
JMJD8
PYCR3
TIGD5
EEF1D
DRD4
H3C13
H2BC18
TUSC2
RASSF1
HYAL2
SH3BGRL3
TSC22D1
TYSND1
ARID5B
RGS19
OPRL1
LKAAEAR1
STPG3
FAM166A
NELFB
TUBB4B
LGR6
NAA10
ARHGAP4
ELK1
SLC12A6
NUTM1
NOP10
EEF1A1
DPH7
MAPK8IP3
ZNHIT2
TM7SF2
FAU
TLCD1
RPL23A
RAB34
NEK8
TUBA1B
ZNF584
ROPN1L
SEC14L1
RPS29
RPEL1
FAM210B
CENPA
MVB12A
SNAP47
JMJD4
NKIRAS1
RPL15
ICA1L
RPL27A
MRPL53
LRRC24
C8orf82
ROMO1
NFS1
RNASEK
C17orf49
BCL6B
CDKN1C
UBC
HMGN2
ZNF581
ZNF580
CCDC106
PRKRIP1
UBB
ISY1-RAB43
ISY1
THEM6
SLURP1
GNE
RPL13A
NOLC1
NPM3
FGF8
CEBPA
KLRC2
ZFP36L1
MLLT6
BASP1
C19orf48
LOC105372440
ACP4
RPL10
DNASE1L1
SIRT7
PCYT2
MAFG
ZNF703
TUBGCP6
HDAC10
NDST2
PLPP5
NUDT1
MRM2
MAD1L1
GMPPB
AMIGO3
KAZALD1
UQCC3
LBHD1
CSKMT
C11orf98
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12F
GAGE12B
MYOZ3
GAGE8
GAGE2E
GAGE2D
GAGE13
GAGE12D
GAGE12G
GAGE12J
FLT4
ZNF653
C5orf24
SLC5A5
RPL18A
MOV10
TEDC2
STYX
PCF11
OSTC
SFN
CAMK2N2
TMEM132A
CDH24
RAB40C
VEGFB
TRPT1
NUDT22
DNAJC4
TBCD
MTFP1
RPL37
PRMT3
GFAP
PDPK1
CEMP1
SCGB1C1
ODF3
SRSF11
RPL35A
LMLN
IQCG
CDC34
SSH3
ADAT1
TNFRSF6B
SCARF1
RILP
FBF1
SP3
SLC35A2
PIM2
SEMA3B
PCBP4
ABHD14B
ABHD14A-ACY1
ABHD14A
EPN1
NFKBIA
MFN1
DYRK1B
CCDC97
TBR1
MSH5
MPIG6B
LY6G6C
DDAH2
CLIC1
SGSM3
CELF1
NME4
DECR2
SNX16
CKB
PCBP1
SGK1
INPP5K
RNF223
SCML1
TSSK4
MDP1
CHMP4A
KLHL11
TMEM121
WDR90
TMEM223
TMEM179B
ATF4
TAF10
RRP8
ILK
TPP1
PDF
NIP7
COG8
TPD52L2
ABHD16B
C1QTNF12
SDF4
B3GALT6
ZNRD2
FAM89B
EHBP1L1
HMGA1
TCTEX1D2
POLB
SMIM29
RAB5B
PMEL
CDK2
PPP1R15B
CISD3
SRSF4
MYL6B
MYL6
SPATC1L
MRPS34
EME2
NME3
NR3C1
PTOV1
CSNK1G1
ADK
VWA7
DLG4
ACADVL
TUBD1
RPS6KB1
FLYWCH1
NOL7
ZFP37
TFAP2A
MLX
COASY
FNBP1
GAS2L1
PRR7
DBN1
VPS4A
C16orf46
PAXX
CLIC3
TTC33
KIF2C
SPOUT1
TBK1
MMP24OS
MMP24-AS1-EDEM2
CTNNAL1
SLC25A17
TMUB1
FASTK
AGAP3
GPS2
EIF5A
NFATC3
C8orf76
C11orf91
SLC39A10
DONSON
MST1
LARP1
NAA80
IFRD2
HYAL3
HYAL1
CHD5
CAPNS1
BAZ2A
XRN1
H4C8
ATP5F1B
SNX14
NUMBL
CEP192
PHLDA2
GET4
CRK
KLC2
BAG2
CACFD1
TNFSF13
SENP3
SLC2A6
ST3GAL3
S100A6
S100A5
C19orf71
MAP1LC3B
FBXO31
NMT1
DCAKD
TMEM107
VAMP2
STAG1
KRT10
NOL3
KIAA0895L
RBM4
ABCB6
NOXO1
GFER
FHL3
PLPPR3
SYNGR3
SF3A3
TNS2
TBL3
NUDT17
SLC39A4
TRABD
SELENOO
TNNC2
UBE2C
DUSP1
RASD1
RPL10A
HPDL
CITED4
SRSF2
MFSD11
METTL23
JMJD6
POLD1
NR1H2
ZNF35
TAOK2
CXCR5
HES3
RPL23
C17orf98
ICMT
ZASP
SAP25
TENT5A
NXF1
SLC25A39
MCCD1
INPP5E
SELENOH
BTBD18
RABGEF1
ACTL10
NECAB3
TFPT
PRPF31
GAS1
RPL3
SPHK2
SPACA4
RPL18
FAM83E
CAPN15
NOP2
RPS5
TSEN54
LLGL2
RNF225
POMT1
DPP3
PRR25
PARP10
PLEC
C7orf26
MLH3
RPL19
CACNB1
SNX5
MGME1
ANKRD12
SURF6
PIDD1
SLC25A22
RPLP2
IAH1
CEBPD
ACOX3
WDR81
URGCP
URGCP-MRPS24
LRP2BP
ANKRD37
TLCD2
DBP
TAP2
TAP1
PSMB9
PSMB8
NANOS1
IGF1R
LENG9
TTLL3
TRAF7
RAB26
FAM156B
FAM156A
MAN2C1
TSPAN31
MARCHF9
CDK4
AGAP2
HSPB1
DCK
MYO1G
LOC102724770
DGCR6
SLC25A10
MRPL12
HAX1
CELSR3
SREBF2
OR2T1
FOSL1
FIBP
CCDC85B
NAPRT
MROH6
COQ3
METTL26
ZNF865
ZNF524
FIZ1
PHPT1
AJM1
SHOX2
RSRC1
WDR62
THAP8
ANKRD39
RPS23
ATP6AP1L
C5orf15
MPHOSPH8
IRF2BP1
TIMM13
FADS2
FADS1
MROH1
HGH1
TENT4A
C20orf144
RGP1
MSMP
GBA2
PYGM
SLC25A42
TXN2
HCN2
PTCH1
CS
TIMM17B
PQBP1
PFN2
BAHCC1
TIGD3
GPR137
IL17C
PLEKHN1
NOC2L
KLHL17
SPANXA2
SPANXA1
PEAK3
OAZ1
CRELD1
ETS2
WDR27
C6orf120
PLCXD1
PABPN1
SLC35B2
HSP90AB1
ABCF3
WDR45
PRAF2
GDI1
FAM50A
ATP6AP1
TEX22
ANP32B
RRM1
ZNF517
AEBP1
FBXO4
RCC2
RPL36
RPLP1
ZNF335
GH1
CSHL1
MAPKAPK5
TSN
RABL2B
RABL2A
SRD5A1
POLR3F
DZANK1
CACTIN
NVL
DYNC1LI2
NUP85
ICE1
MRPS7
MIF4GD
GGA3
IPO13
VDAC2
NME6
RWDD1
OAZ3
MRPL9
REXO1
LYRM4
FARS2
PSMD12
SLC35B1
SUCLG1
ZNF576
IRGQ
S1PR4
NCLN
HSPA9
FAM187A
EFTUD2
CCDC103
TAOK3
SUDS3
CAPRIN1
UBE2I
POLR2E
GPX4
RBBP5
PSMG2
CEP76
UPF2
GOSR2
EXOSC5
BCKDHA
RABGGTB
SMIM14
DCTN1
VARS1
NNAT
BLCAP
NUP205
MRPS5
HADHB
HADHA
STAM2
HMGB1
PSMD1
ACTR10
CDC73
COX7A2L
POLR2J3
COMMD1
CCT4
STAM
USP29
PAK1IP1
C6orf52
TSNAX
SEC61B
ALG2
SUPV3L1
RPS27A
CLHC1
SART3
ISCU
PI4KB
MRPL40
HIRA
SKP1
USP1
PDAP1
BUD31
PES1
NDUFA4
EPN2
PTGES2
ZRANB2
RPL21
IRF2BP2