ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9932062 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◢ SRX017710: CD4+ T cells

◢ SRX5090184: GM12878

◢ SRX10475642: Hep G2

◢ SRX10475643: Hep G2

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◣ SRX9932062: MCF-7

◢ SRX9932063: MCF-7

◢ SRX9932064: MCF-7

◢ SRX9932065: MCF-7

◢ SRX9932066: MCF-7

◢ SRX9932067: MCF-7

◢ SRX9932068: MCF-7

◢ SRX9932069: MCF-7

◢ SRX9932070: MCF-7

◢ SRX9932071: MCF-7

◢ SRX9932072: MCF-7

◢ SRX9932073: MCF-7

◢ SRX9932074: MCF-7

◢ SRX9932075: MCF-7

◢ SRX9932076: MCF-7

◢ SRX9932077: MCF-7

◢ SRX23330419: MDA-MB-231

◢ SRX23330420: MDA-MB-231

◢ SRX23330421: MDA-MB-231

◢ SRX23330422: MDA-MB-231

◢ SRX23330424: MDA-MB-231

◢ SRX23330425: MDA-MB-231

◢ HDAC6: STRING

GREB1
TFF1
IGFBP4
TMIGD3
ADORA3
PDZK1
IL24
TMEM104
NAT9
PARD6B
CASP7
NBPF4
IER3
FLOT1
MYOG
RARA
TSKU
NBPF6
FKBP4
FAM174B
SLC25A25
NAIF1
OSGIN1
STARD10
FILIP1L
SBNO2
HSPB8
PRLH
FREM2
VASN
ADAMTSL5
SPINK4
PPP2R2C
AMBP
OVOL2
LMAN1L
CPLX3
SLC22A5
CDC42EP1
LGALS2
TPD52L1
DGKZ
SGK3
GSG1L
YIF1B
KCNK6
RNF223
RPS6KL1
DCAKD
ATP6AP1
DNASE1L1
CHPT1
ST8SIA6
CDH1
UBE2T
RAPGEFL1
PTPA
CRAT
CAP2
TMEM229B
TTC39A
CYP1B1
NAV2
CANT1
C1QTNF1
BACE1
CELSR2
YBEY
MCM3AP
SLC25A24
N4BP3
SCOC
AMZ1
TH
INS
CCDC88C
SLC9A3R1
MLPH
SYT12
SFXN2
ARL3
DUX4
TIPARP
PLEKHH1
KRT37
HAAO
ARPC1B
IL19
PPARGC1A
AKAP1
RET
ACOT6
NHSL1
GPRIN1
NBPF1
HEG1
UPF1
ATP5F1A
MYB
RGS10
KDM4B
SRRM2
XAB2
FASN
ATP8B1
KRT8
C1QTNF6
SNX24
C19orf33
USP31
SERPINF1
TMEM92
MSMB
DMRT2
CXXC5
APOC3
APOA1
PDGFA
LAMC1
TFAP2C
MANEAL
NEMP1
NAB2
ESR1
GPR37L1
ZNF185
MCF2L
ITPK1
MYEOV
B3GNT6
MAP3K14
FBP1
BMP7
FOXK1
SLC7A5
CABLES2
HAPLN2
PADI4
LY6E
SMTNL2
KIF21A
CTBP1
CTAG2
EHF
UMODL1
NFKBIA
SPTBN4
BLVRB
TBX2
MAPT
PGLYRP2
STK11
IPPK
SLC25A45
FRMD8
KEAP1
CELA2A
YPEL2
LYPD6B
FAM102A
ASB13
SERPINA1
MIDEAS
PLIN5
LRG1
LONP2
ABCC11
C1orf162
ADAM8
DOK7
ABCD4
OTUD7B
CELA2B
AFF1
CCR6
SEC14L6
UHRF1
DECR1
MSLN
NFIB
DNPEP
VPS26C
TIFA
BDKRB1
FST
MAMDC4
EDF1
DHX37
BRI3BP
EPS15L1
PDE4DIP
CCN5
EREG
KRT85
ABAT
CST6
ARHGEF18
FCGR2B
ZNF79
KLK14
OLFML3
MACC1
SPATS2L
LRRFIP2
MRFAP1
PTGES
ACACB
KLF16
CCDC198
ALX4
SYT8
TMED8
SAMD15
SEPTIN9
MIOS
GRIK3
FRG2C
CA12
IKBKG
G6PD
COLEC12
PAXX
CLIC3
RERG
CUEDC1
CRKL
TMCC1
UNKL
ARMCX6
ARMCX3
ACSS1
ELAPOR1
C1orf194
FMN1
ALG8
ZBTB37
LRRC56
HRAS
TJAP1
KAZN
VWA2
UGT2B15
SLC25A47
MAD1L1
KRT19
CDH26
ARHGEF10L
FOXK2
SPOP
CSAD
LATS1
RAB40C
SLC25A42
PLCD3
ACBD4
CTR9
NPEPPS
KIAA0319
SNAI1
LRP5L
UQCC2
PRDX1
NDRG1
CALCR
GPC6
KAT6B
ANKH
PKP3
ANKRD2
ABHD2
EFHD2
NT5DC3
B4GALT1
MRGPRG
VEPH1
ELF1
SLC25A36
TUBA1A
FAM187A
GFAP
CPA6
NMNAT1
LZIC
CBWD5
CBWD3
CBWD6
FGR
TBKBP1
CERS2
ANXA9
GPSM1
TCIRG1
NDUFS8
SGCA
MAGI3
PAK4
FUT4
INSYN1
EBF4
PPP1R12B
JPH2
PSD4
RCOR3
SIAH2
TNS1
PLEC
SLC26A1
IDUA
SHANK2
AGR3
RHOD
SVIL
ALDH3B1
PRR5-ARHGAP8
PRR5
ISYNA1
TNNI2
COPS8
CCNL1
TPD52L2
ABHD16B
VCAN
ZNF346
CYP4F2
MANBAL
TMEM212
ATP13A3
CAPN12
LRRC58
RIPPLY1
CLDN2
TLE1
ERN1
GRAMD1A
ETNK2
AGPS
DSN1
NPIPB9
WWC1
ADGRG1
BAMBI
PXDC1
PTPRR
MARCHF10
CTSD
CHSY1
ATP6AP2
TFAP2A
PDE4C
ART1
CDK3
ARAP3
RPS28
NDUFA7
TTC6
FOXA1
HDAC11
ELOVL2
SYNPO2L
MICOS10-NBL1
MICOS10
TRH
DNAJC5B
COMTD1
FAM214A
CBFA2T3
RETREG1
PLEKHF1
SLC25A1
CHST8
PNKD
P2RY2
PRUNE1
MINDY1
MFSD10
SYNE3
SLC45A4
PERP
TSPEAR
KRTAP10-12
C20orf203
RHOBTB1
SLC9A3R2
MGAT3
COX7A2L
SERPINA6
MAT1A
ZFP36
PLEKHG2
NIPSNAP2
FAM228B
TP53I3
SF3B6
NXNL2
LOC102723996
ICOSLG
TST
MPST
TTC9B
CCNP
IL2RB
ORAI2
SULT2B1
ADORA1
SIDT2
RGS12
DHRS2
SYNJ2
CYP4F11
REM2
KLK13
RECQL4
MFSD3
LRRC14
B3GALNT1
SHC2
RGL3
RPS6KA2
TSSC4
SURF4
GOLM1
SVEP1
NXT1
GZF1
APOA4
MTRNR2L1
DHRS3
FGFBP2
ADARB1
CBWD2
DNAJA4
LIMS1
SLC35E2A
ZNF710
MFSD6
SLC2A12
IL20
ACIN1
FAM184A
SLC43A2
HK1
KLRF2
NPIPA3
NPIPA2
PLA2G10
GZMM
CDC34
SDC4
KLK12
GRM4
MYZAP
GCOM1
IER5L
ME3
EDN1
GDF15
AZGP1
NR2F2
HASPIN
RBM43
EIF5AL1
LONRF2
PPP2R5E
NRP1
FSIP1
CDH18
PAQR5
TUBA3D
KRT13
GINS3
SLC37A3
RAB19
LOC100130520
CD300H
C17orf77
RABGEF1
PTH1R
PLCB1
TWF2
PPM1M
HUWE1
TAFA5
CALHM4
CASTOR1
PCYT1A
CDC42EP3
TMEM95
KCTD11
SPRY4
DNMBP
ST3GAL4
LIMS4
LIMS3
EXT2
ASPG
SLC19A1
PKIB
HOMER2
ADCY5
ZMYND11
FIGNL2
A4GALT
SSTR2
PALLD
NBPF12
MERTK
ARID5B
ENTPD8
CFAP206
SUN5
BPIFB2
FRG2
LOC102724770
DGCR6
SPATC1L
MTRNR2L2
MSH3
DHFR
MTRNR2L8
CLASP2
ASB2
KIF5C
COL23A1
ZBTB46
SP2
SEMA3B
PTPRN2
KCNIP2
MAPKAPK3
CISH
SLC25A19
CCDC200
EAPP
UBALD1
MGRN1
ZBTB45
SLC27A5
RGPD2
RGPD1
TBX1
AKNA
METTL26
SPAAR
HRCT1
PLXNB1
SUSD3
PRSS27
NFE2L1
TMEM210
LRRC26
SCGB3A1
WNT16
RTN1
MAMDC2
PHRF1
FOXN1
WDR90
TUBA3E
ZFYVE28
WDR74
STX5
CFAP99
CRYAA2
CRYAA
APTX
EPB41L1
POLR3F
DZANK1
NEFH
SCARB1
RTEL1
DNAJA1
SLC1A5
EPN1
GTPBP6
MTRNR2L10
EMILIN2
TTC39C
RNF144A
DNMT3A
TAX1BP1
USP17L21
USP17L20
USP17L12
DNM2
MTRNR2L9
STMN3
LFNG
DOT1L
BOD1L2
ARHGEF16
USP17L22
MYLK2
CCR7
LEMD2
ROBO3
OBSL1
INHA
TXNRD1
FBXW8
TMEM242
CDR2L
HSPA4
RFX1
USF2
TAF12
TDRD9
ATP5MPL
ELFN2
ITGB5
CLCN4
TSEN54
CASKIN2
AP1B1
CNOT3
NLK
DDX10
PI4KB
LPCAT1
HNRNPL
FAM3B
ACOX3
CCDC9B
ATXN1
RCAN1
RNF170
OSBP
HOOK3
LTBP1
DMPK
RNPEPL1
DUSP28
ANKMY1
C3
MAPK13
FRMD5
MTRNR2L6
MIDN
JUP
TBXA2R
SPTB
TTLL6
TBC1D14
CALML5
DDX47
NT5C2
EVI5L
NAIP
DEF6
SLC29A1
MYMX
NR2F6
MUC3A
SDC1
PABPC1
ZBTB7A
ABR
GPRC5A
FABP3
IMMP2L
UBL4A
SLC10A3
ATG9B
ABCB8
RGS3
DLG4
ACADVL
OAZ3
MRPL9
RALGPS2
UBE2H
HKDC1
NTMT1
DLC1
FADD
PPL
TPTEP2-CSNK1E
BCL3
TOM1L2
FOXO6
DRC3
SNX10
H4C15
H4C14
H3C15
H3C14
HSFX3
EOLA1
HSPB1
HSP90AB1
OXT
RMND5B
C9orf50
PMEPA1
PRSS22
SLC6A6
USP17L13
MTA1
SIN3B
BAIAP3
PRDM4
ASCL4
ARFGEF2
FNIP2
ANXA2
RPL13
NCAPH
ITPRIPL1
EHD1
CIC
ZNF746
PDLIM2
GATAD2A
MAPKAPK5
ITGB2
USP17L11
POLDIP3
ZNF687
VWA1
TMEM88B
ZNF552
KCNH7
MEF2A
PABPN1
PARP16
TSPAN5
SLC35E1
USP17L18
SHCBP1L
FAM234B
JARID2
TRMT10B
TRPM7
ZBTB7B
CST9
ATG16L2
ATP4A
ZNF385B
SLC37A1
RABL6
CCDC183
FUT7
C9orf139
ABCA2
RGS19
OPRL1
LKAAEAR1
ABCD3
PTMA
FARSB
PCIF1
IL1F10
PAX9
TP63
FBH1
ANKRD16
TPBG
CRK
ZNFX1
TMEM147
ZSWIM6
ARHGAP29
TMEM107
USP17L10
PTP4A2
SIRT4
CAND1
H2AC19
H2AC18
AMOTL2
CDH11
PMF1-BGLAP
PMF1
ZNRF2
TEX36
BHLHE40
NDRG4
USP17L17
USP17L15
STC2
SETD2
SULT1A4
SULT1A3
LGR6
LENG1
KIF2C
PGF
B3GNT3
ABCA3
RASEF
SH3GLB2
MIGA2
PADI3
EXOSC5
BCKDHA
MTUS1
LARGE1
FUS
FYB2
EPPK1
TNK2
UBE2I
RAI14
HID1
GLRX5
RBBP5
H4C12
H4C11
B2M
SPATA9
RHOBTB3
PDCD6IP
ATF4
TJP3
NUP85
CIB2
ANKHD1-EIF4EBP3
ANKHD1
TKTL2
ZMYND8
NPIPB6
ASS1
CPN2
PAX4
KLF10
ETV4
SH3YL1
ACP1
AFAP1
OPN4
FECH
MICAL3
CPNE6
CARMIL3
SART3
ISCU
KHSRP
UNC5B
S100P
LSMEM2
MYBPH
H2BC5
H1-4
BATF
RPS29
GJD3
PRSS23
BTNL9
SH2D3C
LCMT1
PEX10
ADD3
H4C9
TTC21B
GPR153
COL26A1
ANAPC7
SRSF7
ENHO
CYB561
ESRP2
SLC16A3
ZNHIT2
TM7SF2
LHX4
JUNB
C1orf198
HOGA1
C10orf62
ANGEL1
KRT36
KRT35
MEIS1
TTC28
UFM1
TCF21
CACNA1H
INAVA
MIEF1
RXRA
MAB21L4
ITGB3
KLRC3
DLL3
TRAF7
SASH3
RAB26
MED12L
LAMB2
GPD1L
TMEM120A
ARPIN-AP3S2
ARPIN
TBC1D16
DYSF
MOCS1
HSFX4
EOLA2
ENKUR
SEC14L5
HOXC6
HOXC5
ADAMTS16
ATP5MG
SH3BGR
LCA5L
GOSR2
C19orf48
TGIF1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
PNO1
MRPS7
MIF4GD
GGA3
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12F
GAGE12B
SPINK13
ZBTB5
SMAD3
ACBD6
CD22
NVL
GTF2B
HRK
NCOA3
ZNF576
IRGQ
IMPA2
FBN1
CSK
ZRANB2
ZNF335
SF3B3
COG4
RAB5B
PMEL
CDK2
ADCY9
IRF2BPL
GRPEL1
EEF1A1
MYH11
H2BC15
H2AC15
TSN
RAB31
UBE2L3
TRIM2
H2BC14
H2AC14
KCNK7
PSMD12
PCNX3
MAP3K11
RPEL1
NUP93
AHCYL1
TOMM40
RAD23A
CALR
BMP4
ZBTB42
AKT1
ZFP37
PRSS8
PHF13
KLHL21
ZNF91
GAA
PKM
H4C3
H1-6
DDIT4
UPK3A
SBSPON
SEMA4G
ID1
DCLK1
CASZ1
ZNF654
EFTUD2
CGGBP1
CCDC103
INTS9
HMBOX1
RPS27
RAB13
NNAT