ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9932070 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◢ SRX017710: CD4+ T cells

◢ SRX5090184: GM12878

◢ SRX10475642: Hep G2

◢ SRX10475643: Hep G2

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◢ SRX9932062: MCF-7

◢ SRX9932063: MCF-7

◢ SRX9932064: MCF-7

◢ SRX9932065: MCF-7

◢ SRX9932066: MCF-7

◢ SRX9932067: MCF-7

◢ SRX9932068: MCF-7

◢ SRX9932069: MCF-7

◣ SRX9932070: MCF-7

◢ SRX9932071: MCF-7

◢ SRX9932072: MCF-7

◢ SRX9932073: MCF-7

◢ SRX9932074: MCF-7

◢ SRX9932075: MCF-7

◢ SRX9932076: MCF-7

◢ SRX9932077: MCF-7

◢ SRX23330419: MDA-MB-231

◢ SRX23330420: MDA-MB-231

◢ SRX23330421: MDA-MB-231

◢ SRX23330422: MDA-MB-231

◢ SRX23330424: MDA-MB-231

◢ SRX23330425: MDA-MB-231

◢ HDAC6: STRING

GREB1
IGFBP4
TMEM104
NAT9
CASP7
TFF1
IER3
FLOT1
TSKU
IL24
PARD6B
PDZK1
TMIGD3
ADORA3
NBPF6
NBPF4
SBNO2
RARA
SLC25A25
NAIF1
FKBP4
CDC42EP1
LGALS2
MYOG
DCAKD
FAM174B
STARD10
VASN
HSPB8
ADAMTSL5
N4BP3
PRLH
YIF1B
KCNK6
OSGIN1
FOXK1
RPS6KL1
FILIP1L
PPP2R2C
ARPC1B
RAPGEFL1
LMAN1L
CPLX3
DGKZ
SYT12
RNF223
TH
INS
AMBP
FREM2
GSG1L
SCOC
MLPH
SPINK4
UBE2T
ST8SIA6
AKAP1
OTUD7B
CTBP1
ATP8B1
SNX24
CCDC88C
SLC22A5
MAMDC4
EDF1
RET
DUX4
CANT1
C1QTNF1
TTC39A
AMZ1
YBEY
MCM3AP
BACE1
CYP1B1
HAAO
TMEM229B
TPD52L1
SRRM2
ATP6AP1
DNASE1L1
MANEAL
SLC25A24
OVOL2
IL19
MSLN
CHPT1
SGK3
C19orf33
MAP3K14
MCF2L
NFKBIA
NBPF1
FASN
FAM102A
PDGFA
CELSR2
ASB13
NEMP1
NAB2
CDH1
ITPK1
KDM4B
NAV2
PADI4
GPRIN1
CXXC5
SFXN2
ARL3
DOK7
TIPARP
B3GNT6
ALX4
ZNF185
LRRFIP2
ALDH3B1
SPTBN4
BLVRB
MYB
CABLES2
PPARGC1A
ATP5F1A
C1QTNF6
MYEOV
APOC3
APOA1
PKP3
USP31
CAP2
KEAP1
NHSL1
HAPLN2
PTPA
CRAT
MIDEAS
SLC25A45
FRMD8
PLEKHH1
KIAA0319
KRT37
LYPD6B
RAB40C
IPPK
LY6E
OLFML3
KLF16
FRG2C
VPS26C
KRT85
SLC9A3R1
RPS28
NDUFA7
PGLYRP2
SLC7A5
AFF1
ADGRG1
MSMB
CRKL
CCN5
XAB2
CST6
ZBTB45
SLC27A5
CTAG2
LAMC1
SPOP
SEC14L6
UPF1
SLC25A42
TBX2
CLASP2
ADAM8
CSAD
GRM4
CHSY1
PAXX
CLIC3
ACOT6
INSYN1
SMTNL2
ZBTB37
FBP1
ABCD4
TCIRG1
NDUFS8
KRT8
MIOS
UNKL
LRRC56
HRAS
ACSS1
GRIK3
ACIN1
SLC25A36
CELA2A
ELF1
KAZN
PDE4C
SLC25A1
HEG1
C1orf162
SGCA
MTRNR2L1
STK11
ESR1
FRG2
SERPINF1
RGS10
TFAP2C
UMODL1
TMEM92
PLIN5
LRG1
GPR37L1
DMRT2
SEPTIN9
KIF21A
SYT8
TIFA
CUEDC1
FCGR2B
CELA2B
ARMCX6
ARMCX3
PAK4
DECR1
FST
CTSD
PDE4DIP
MAPT
UHRF1
FMN1
CALCR
VWA2
EPS15L1
LOC102724770
DGCR6
MRFAP1
SPATC1L
ARHGEF18
CCR6
CA12
PRR5-ARHGAP8
PRR5
KRT19
MAD1L1
ABAT
FOXK2
MTRNR2L2
MSH3
DHFR
LONP2
ABCC11
SPATS2L
TJAP1
CCDC198
DHX37
BRI3BP
RHOD
PLCD3
ACBD4
TTC6
FOXA1
BDKRB1
ZNF79
MICOS10-NBL1
MICOS10
EHF
SLC25A47
DNPEP
ZFP36
PLEKHG2
MACC1
EREG
MTRNR2L8
SLC9A3R2
SNAI1
COLEC12
RECQL4
MFSD3
LRRC14
B4GALT1
UGT2B15
TRH
LRP5L
GPC6
COPS8
WWC1
PSD4
KAT6B
CERS2
ANXA9
RCOR3
ARHGEF10L
EBF4
SERPINA1
PRDX1
ART1
LATS1
CDK3
BMP7
FUT4
TUBA1A
ACACB
NFIB
TPD52L2
ASB2
TMCC1
MFSD10
ATP13A3
PPP1R12B
NMNAT1
LZIC
CBWD5
CBWD3
ABHD16B
YPEL2
SIAH2
RERG
CAPN12
AGR3
SYNPO2L
ISYNA1
TMED8
SAMD15
KIF5C
AGPS
SYNE3
HDAC11
SVIL
NPEPPS
ALG8
CDH26
IKBKG
G6PD
COL23A1
MRGPRG
FAM187A
CBWD6
MANBAL
IL2RB
GPSM1
KLK14
CBFA2T3
CTR9
ELAPOR1
C1orf194
FGR
ARAP3
VCAN
SULT2B1
ANKRD2
ZBTB46
SLC26A1
IDUA
PTGES
DSN1
ATP6AP2
RGL3
EFHD2
ANKH
SP2
TNNI2
PLEC
RETREG1
ETNK2
GFAP
MGAT3
CHST8
TNS1
SEMA3B
VEPH1
RABGEF1
SYNJ2
EDN1
UQCC2
PTPRN2
ZNF346
MYZAP
GCOM1
TLE1
B3GALNT1
NIPSNAP2
FAM228B
TTC9B
CCNP
ABHD2
DHRS3
NT5DC3
P2RY2
TP53I3
SF3B6
KCNIP2
LIMS1
PNKD
MAPKAPK3
CISH
SERPINA6
ST3GAL4
SLC25A19
FAM214A
NRP1
LRRC58
CCDC200
SVEP1
SLC35E2A
EAPP
PRUNE1
MINDY1
CFAP206
UBALD1
MGRN1
TBKBP1
GDF15
PERP
NXNL2
ARID5B
MAT1A
ORAI2
TSSC4
RGPD2
RGPD1
NPIPB9
PXDC1
SURF4
GZMM
CDC34
SHC2
ADARB1
TBX1
CASTOR1
NDRG1
TFAP2A
AKNA
CBWD2
METTL26
TUBA3D
SPAAR
HRCT1
PLXNB1
SUSD3
SIDT2
PRSS27
NFE2L1
CCNL1
TMEM210
LRRC26
CYP4F2
SLC43A2
SCGB3A1
WNT16
RTN1
NXT1
MAMDC2
PHRF1
MAGI3
COMTD1
FOXN1
LONRF2
REM2
LOC100130520
CD300H
C17orf77
WDR90
TUBA3E
COX7A2L
ZFYVE28
WDR74
STX5
CFAP99
CRYAA2
CRYAA
APTX
EPB41L1
GZF1
POLR3F
DZANK1
C20orf203
NEFH
SCARB1
EIF5AL1
RTEL1
SDC4
TST
MPST
PCYT1A
SHANK2
DNAJA1
SLC1A5
EPN1
GTPBP6
MTRNR2L10
DNAJC5B
ELOVL2
GOLM1
EMILIN2
TTC39C
ADORA1
CPA6
RNF144A
FIGNL2
PTPRR
DNMT3A
TAX1BP1
USP17L21
USP17L20
USP17L12
IER5L
DNM2
TMEM95
KCTD11
MTRNR2L9
STMN3
PTH1R
CYP4F11
LFNG
DOT1L
LIMS4
LIMS3
TMEM212
BOD1L2
ARHGEF16
PLCB1
HK1
NR2F2
USP17L22
MYLK2
IL20
CCR7
LEMD2
GRAMD1A
ROBO3
OBSL1
INHA
TXNRD1
FSIP1
FBXW8
ERN1
TMEM242
SPRY4
CDR2L
HSPA4
RFX1
RPS6KA2
USF2
KLK13
TAF12
LOC102723996
ICOSLG
TDRD9
ATP5MPL
ELFN2
ITGB5
GINS3
CLCN4
ZNF710
TSEN54
CASKIN2
MFSD6
KLK12
SLC45A4
AP1B1
DHRS2
CNOT3
CDH18
SLC37A3
RAB19
NLK
DDX10
CDC42EP3
RIPPLY1
CLDN2
PI4KB
FGFBP2
LPCAT1
HNRNPL
FAM3B
BAMBI
ACOX3
TSPEAR
KRTAP10-12
CCDC9B
ATXN1
RCAN1
RNF170
OSBP
HOOK3
RGS12
JPH2
LTBP1
DMPK
RNPEPL1
DUSP28
ANKMY1
C3
MAPK13
FRMD5
MTRNR2L6
MIDN
JUP
TBXA2R
SPTB
TTLL6
EXT2
MARCHF10
RHOBTB1
TBC1D14
CALML5
DDX47
NT5C2
EVI5L
NAIP
APOA4
ADCY5
DEF6
SLC29A1
MYMX
NR2F6
MUC3A
SDC1
PABPC1
ZBTB7A
ABR
GPRC5A
FABP3
FAM184A
IMMP2L
PLEKHF1
UBL4A
SLC10A3
DNAJA4
ATG9B
ABCB8
RGS3
DLG4
ACADVL
OAZ3
MRPL9
RALGPS2
UBE2H
HKDC1
CALHM4
NTMT1
DLC1
ME3
FADD
ZMYND11
PPL
KRT13
TPTEP2-CSNK1E
BCL3
TOM1L2
FOXO6
DRC3
SNX10
H4C15
H4C14
H3C15
H3C14
HSFX3
EOLA1
HSPB1
HSP90AB1
OXT
RMND5B
C9orf50
PMEPA1
PRSS22
SLC6A6
USP17L13
MTA1
SIN3B
BAIAP3
HOMER2
PRDM4
ASCL4
ARFGEF2
FNIP2
ANXA2
KLRF2
RPL13
NCAPH
ITPRIPL1
EHD1
CIC
ZNF746
PDLIM2
GATAD2A
MAPKAPK5
ITGB2
SSTR2
USP17L11
RBM43
POLDIP3
ZNF687
VWA1
TMEM88B
ZNF552
TWF2
PPM1M
KCNH7
MEF2A
PPP2R5E
PABPN1
PARP16
TSPAN5
SLC35E1
USP17L18
SHCBP1L
FAM234B
ASPG
JARID2
TRMT10B
TRPM7
ZBTB7B
CST9
ATG16L2
ATP4A
ZNF385B
SLC37A1
RABL6
CCDC183
FUT7
C9orf139
ABCA2
RGS19
OPRL1
LKAAEAR1
ABCD3
PTMA
NBPF12
FARSB
PCIF1
IL1F10
PAX9
TP63
FBH1
ANKRD16
TPBG
CRK
ZNFX1
TMEM147
ZSWIM6
MERTK
ARHGAP29
TMEM107
USP17L10
PTP4A2
SIRT4
CAND1
H2AC19
H2AC18
AMOTL2
CDH11
PMF1-BGLAP
PMF1
ZNRF2
TEX36
BHLHE40
NPIPA3
NPIPA2
NDRG4
ENTPD8
USP17L17
USP17L15
STC2
SETD2
SULT1A4
SULT1A3
LGR6
PALLD
LENG1
KIF2C
PAQR5
PLA2G10
PGF
B3GNT3
ABCA3
HUWE1
RASEF
SH3GLB2
MIGA2
PADI3
EXOSC5
BCKDHA
MTUS1
LARGE1
FUS
FYB2
EPPK1
TNK2
UBE2I
RAI14
SLC19A1
HID1
GLRX5
SLC2A12
RBBP5
A4GALT
H4C12
H4C11
B2M
SPATA9
RHOBTB3
PDCD6IP
ATF4
TJP3
NUP85
CIB2
ANKHD1-EIF4EBP3
ANKHD1
TKTL2
ZMYND8
NPIPB6
ASS1
CPN2
PAX4
KLF10
DNMBP
ETV4
SH3YL1
ACP1
AFAP1
OPN4
FECH
MICAL3
CPNE6
CARMIL3
SART3
ISCU
KHSRP
UNC5B
S100P
LSMEM2
MYBPH
H2BC5
H1-4
BATF
RPS29
GJD3
PRSS23
BTNL9
PKIB
SH2D3C
LCMT1
PEX10
HASPIN
ADD3
H4C9
TTC21B
GPR153
COL26A1
ANAPC7
SRSF7
ENHO
CYB561
ESRP2
SLC16A3
ZNHIT2
TM7SF2
LHX4
JUNB
C1orf198
HOGA1
C10orf62
ANGEL1
KRT36
KRT35
MEIS1
TTC28
UFM1
TCF21
CACNA1H
INAVA
MIEF1
RXRA
MAB21L4
ITGB3
KLRC3
DLL3
TRAF7
SASH3
RAB26
MED12L
LAMB2
GPD1L
TMEM120A
ARPIN-AP3S2
ARPIN
TBC1D16
DYSF
MOCS1
HSFX4
EOLA2
ENKUR
SEC14L5
HOXC6
HOXC5
ADAMTS16
AZGP1
ATP5MG
SH3BGR
LCA5L
GOSR2
C19orf48
TGIF1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
PNO1
MRPS7
MIF4GD
GGA3
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12F
GAGE12B
SPINK13
ZBTB5
SMAD3
ACBD6
CD22
NVL
GTF2B
HRK
NCOA3
ZNF576
IRGQ
IMPA2
FBN1
CSK
ZRANB2
ZNF335
SF3B3
COG4
RAB5B
PMEL
CDK2
ADCY9
IRF2BPL
GRPEL1
EEF1A1
MYH11
H2BC15
H2AC15
TSN
RAB31
UBE2L3
TRIM2
H2BC14
H2AC14
KCNK7
PSMD12
PCNX3
MAP3K11
RPEL1
NUP93
AHCYL1
TOMM40
RAD23A
CALR
BMP4
ZBTB42
AKT1
ZFP37
PRSS8
PHF13
KLHL21
ZNF91
GAA
PKM
H4C3
H1-6
DDIT4
UPK3A
SBSPON
SEMA4G
ID1
DCLK1
CASZ1
ZNF654
EFTUD2
CGGBP1
CCDC103
INTS9
HMBOX1
RPS27
RAB13
NNAT
EIF3E
BLCAP
PCTP