ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5090184 | GM12878
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◢ SRX017710: CD4+ T cells

◣ SRX5090184: GM12878

◢ SRX10475642: Hep G2

◢ SRX10475643: Hep G2

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◢ SRX9932062: MCF-7

◢ SRX9932063: MCF-7

◢ SRX9932064: MCF-7

◢ SRX9932065: MCF-7

◢ SRX9932066: MCF-7

◢ SRX9932067: MCF-7

◢ SRX9932068: MCF-7

◢ SRX9932069: MCF-7

◢ SRX9932070: MCF-7

◢ SRX9932071: MCF-7

◢ SRX9932072: MCF-7

◢ SRX9932073: MCF-7

◢ SRX9932074: MCF-7

◢ SRX9932075: MCF-7

◢ SRX9932076: MCF-7

◢ SRX9932077: MCF-7

◢ SRX23330419: MDA-MB-231

◢ SRX23330420: MDA-MB-231

◢ SRX23330421: MDA-MB-231

◢ SRX23330422: MDA-MB-231

◢ SRX23330424: MDA-MB-231

◢ SRX23330425: MDA-MB-231

◢ HDAC6: STRING

MTRNR2L2
MSH3
DHFR
MTRNR2L8
MTRNR2L1
DUX4
FRG2C
MYH11
DLL3
SPAAR
HRCT1
TMEM210
LRRC26
FBN1
FRG2
LOC102724770
DGCR6
KCTD1
TUBA1A
MAMDC2
IL32
TRIM2
CEBPD
TMEM17
BCAT1
JAKMIP1
PHRF1
KIF5C
FGF18
EPN1
TAF12
WDR74
STX5
PARP16
TMEM107
EAPP
NR2C1
CRYAA2
CRYAA
TRRAP
TMEM130
RASSF5
EOMES
HRK
C20orf204
ACE
SRSF7
EGR2
GJD3
FAM78B
MAD2L2
DRAXIN
JPT1
PTK7
ALKAL2
ATOH8
EIF4A3
FUS
ARHGAP45
TACR1
MICAL3
RPS6KA4
TBL3
RPS2
RNF151
NDUFB10
RPL3L
TRAF7
RAB26
SIRT4
MISP3
TCF7L2
BFSP1
RGPD2
RGPD1
ARSI
ITGB3
KSR2
NPPC
TMEM242
ZBTB4
SLC35G6
POLR2A
CASZ1
MAPT
DYSF
CEP295NL
NEU4
FAM43B
ARMH4
RAB20
MRPL23
MAPKAPK5
OXCT2
AMZ2
ACOT6
RPLP0
GCN1
ZNF593
SLC24A4
FAM110D
CDX2
C1orf232
MYLIP
ANKDD1A
WNT5A
SYNM
ART1
MRPS26
GNRH2
PAX4
HEXIM1
DHH
SLC27A2
CHST11
PEAK3
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
RBM20
FLT3
EPCAM
XXYLT1
THEM6
RUBCNL
RIPK1
FSCN1
POLDIP3
SLC20A1
TSN
GALR3
ZMYND10
TRADD
RASSF1
NPRL2
NOL3
HSF4
FBXL8
MACIR
MAT2A
EEF2
EFCC1
CFAP92
UQCC3
LBHD1
CSKMT
C11orf98
POLR3F
DZANK1
SOCS3
EIF4E3
SCD5
GPR27
ERICH5
EPHA3
FAM174C
CIRBP
MAP1B
HOXB2
NDUFAF3
IMPDH2
DALRD3
SV2C
PDGFRA
NRCAM
ADARB1
GRAMD1B
PTF1A
NWD2
GTF2A1
RPS12
ACOT4
SPATA9
RHOBTB3
OPRD1
FJX1
CCDC200
TEX45
SYT17
BTG1
KCNB2
GLT1D1
DOCK8
CALM1
RPLP1
UBE2M
SRSF12
CHMP2A
C1orf21
PIK3CD
FAM151B
TSEN34
RPL3
NEURL1B
DOCK10
CACTIN
UTRN
STOX1
H4C12
H4C11
H2BC15
H2AC15
PDE4A
TUBGCP5
SLC16A14
OLFML2B
NEUROD2
SLC25A27
GALNT18
CYP39A1
CIBAR1
INTS6
RPS27
RAB13
TSPAN5
MRC2
DDAH1
EDARADD
TFRC
RORB
GAD1
BHLHE41
EMILIN2
WNT2
TMOD2
SPINT1
LYSMD2
AMZ1
DPAGT1
HMBS
H2AX
CEBPB
ABTB2
TBXT
SUSD5
SLC9A3R2
MEIS1
TUBA1C
PTPRG
PCDHGC4
PCDHGC3
NPW
GADD45B
BCAR3
PIP5K1B
UBE2S
KCTD12
ST8SIA5
PTH2
NKX1-1
GFY
LHX4
IQGAP2
KCNMA1
UBC
MEF2C
SVIL
VASP
RTN2
PPM1N
FGFR1
HHAT
AFAP1
ICA1
PRSS56
GFOD1
TEX15
SLCO4A1
CHRND
NBPF1
HACD1
MATK
MBD6
DDIT3
ARRDC2
LCMT2
EEF1AKMT2
DZIP1
ADAL
ABRAXAS2
HNRNPA2B1
CBX3
UNC5C
LRP11
HNRNPH1
IL15RA
HELT
HSP90AB1
TTYH2
RPL38
JAK1
CALHM6
KLHL35
SS18L1
PSMA7
H4-16
H2AJ
PRDX1
HSP90AA1
FRMD6
REXO1
RPS6
EIF4A1
CD68
MPPE1
GAS1
CD74
H1-2
SRSF3
PRRT4
PDE4C
ACOT1
KANK3
ERO1B
KANK1
DGKH
RAD23A
CALR
NXF1
P2RY1
FARSA
SKP1
PFKFB3
SFRP5
CCL28
RPS20
PROS1
MMP28
CDCA7L
ARL13B
ACOT2
PDGFD
UNK
H3-3B
SIX1
NRARP
BIN1
THOC3
RASL10A
INSM1
IL7
GAS2L1
FAM43A
DAB1
GTF2B
DNAJB4
TFCP2L1
SRSF6
CLGN
ZBTB37
CHN1
PLPP3
SPTAN1
EIF1
QDPR
CLRN2
H2BC4
H2AC6
SNORC
RASGRF1
JUNB
TMEM51
SPRED3
RPS26
PALD1
LRRFIP1
GGN
FAM98C
ADHFE1
SPATC1L
UBB
SHISA3
KIF2C
B2M
RSRP1
RASD1
PTPN5
HMGA1
EIF4A2
CYP24A1
CLASP2
ZCWPW1
PPP1R35
MEPCE
SEMA6A
RPS3
PHLDA3
KCTD15
KCNA6
LTBP1
AMOTL2
H2BC5
H1-4
NME6
TMEM259
CNN2
NTRK2
FOSL2
HFM1
GOLGA5
WSB1
ATF4
H2BC14
H2AC14
TRMO
R3HDM4
KISS1R
GCNT4
DUSP1
ARID3A
TMEM229B
PLEKHH1
SCRT1
DGAT1
RABL2B
GEMIN4
GLS
ZNF277
RNF4
DOCK4
DIPK1C
RIMBP3C
RIMBP3B
KDM4A
NAAA
H3C6
H2BC8
H2AC8
ZNF720
KIAA1549L
GLB1L3
APTX
DNAJA1
DNAJC25-GNG10
DNAJC25
CBR3
RIOX1
CSRNP2
CFAP73
ADRB2
VSIG8
FGFBP3
SIX4
ARHGAP42
RGS6
RNF125
MT3
SMTNL2
PHACTR2
MIIP
CAMK2N2
CCNL1
H2BC21
H2AC21
H2AC20
ZC3H10
RPL41
PTPN6
C12orf57
SURF2
SURF1
RPL7A
MED22
LAP3
KLF1
H1-10
GCDH
DNASE2
C19orf48
LBH
SLC30A3
DLX1
CYP26C1
CYP26A1
GNB4
ATP6V1FNB
ATP6V1F
MRPS18B
EIF4G2
SIX5
ZNF853
VAMP1
TPCN1
IQCD
HLA-DQA1
GJA3
FZD2
C6orf62
NOP14
GRK4
LDHA
TPBGL
POLR3D
ENDOD1
FAM53C
CDC25C
TMSB10
RPL22
RNF207
H4C3
H1-6
HEXB
WDR37
TNFRSF1B
IDI1
CALM2
PAH
OAF
ELOVL7
ASCL1
SLC3A2
POR
LSR
INPP1
ZC3HAV1L
HOXA3
SH3RF3
SFRP4
HOXA9
HOXA7
HOXA6
EPDR1
POLR2J
PLXND1
GPX1
IER5
KIAA1614
NSMCE4A
GPR157
AADAT
HSPA1B
SLC27A3
FTL
RPS11
RPL13A
PRRG4
STXBP6
RPL32
ENOX1
BBC3
LENG9
HIBADH
SLC43A1
RPS27L
GDF1
CERS1
BMP2
IER5L
ADRB3
VGF
AP1S1
ZBED3
RHOB
TMEM238
TMEM190
RPL28
NXPH3
IRF8
SPSB4
RELT
HR
CLIC6
SRSF5
H4C2
H3C2
H2AC4
H4C1
H3C1
H1-1
STAT1
CLTA
GREB1
IGFBP4
TFF1
CASP7
TMEM104
NAT9
IL24
TMIGD3
ADORA3
IER3
FLOT1
TSKU
PDZK1
RARA
FKBP4
MYOG
SLC25A25
NAIF1
STARD10
HSPB8
PARD6B
FAM174B
OSGIN1
NBPF4
PRLH
SBNO2
NBPF6
ADAMTSL5
DCAKD
PPP2R2C
CDC42EP1
LGALS2
FILIP1L
FREM2
VASN
YIF1B
KCNK6
RNF223
SPINK4
RPS6KL1
LMAN1L
CPLX3
SLC22A5
GSG1L
DGKZ
RAPGEFL1
N4BP3
ST8SIA6
OVOL2
TPD52L1
SCOC
AMBP
TH
INS
MLPH
SGK3
SYT12
ARPC1B
CANT1
C1QTNF1
ATP6AP1
DNASE1L1
TTC39A
UBE2T
CYP1B1
HAAO
RET
CHPT1
FOXK1
SNX24
BACE1
CELSR2
CCDC88C
CAP2
SFXN2
ARL3
ATP8B1
CDH1
TIPARP
NAV2
CTBP1
SLC25A24
MCF2L
YBEY
MCM3AP
KRT37
OTUD7B
AKAP1
C19orf33
KDM4B
MAP3K14
MANEAL
PPARGC1A
PTPA
CRAT
MSLN
SLC9A3R1
NEMP1
NAB2
NFKBIA
FASN
SRRM2
NHSL1
IL19
PADI4
B3GNT6
MAMDC4
EDF1
CTAG2
C1QTNF6
HAPLN2
LY6E
USP31
PDGFA
ZNF185
SLC7A5
KRT8
HEG1
ITPK1
ASB13
CXXC5
FAM102A
MSMB
MYEOV
MYB
GPRIN1
STK11
APOC3
APOA1
UPF1
ATP5F1A
LRRFIP2
XAB2
ESR1
CABLES2
PAXX
CLIC3
SEC14L6
LAMC1
SLC25A45
FRMD8
MIDEAS
PGLYRP2
SPTBN4
BLVRB
DOK7
SERPINF1
KEAP1
RGS10
ALX4
TFAP2C
LYPD6B
AFF1
VPS26C
OLFML3
IPPK
ALDH3B1
FBP1
KRT85
CRKL
UMODL1
CST6
TMEM92
CCN5
PLIN5
LRG1
GPR37L1
RAB40C
CELA2A
DMRT2
SEPTIN9
TBX2
LRRC56
HRAS
KIF21A
UNKL
ADAM8
KIAA0319
SYT8
SPOP
TIFA
CUEDC1
SLC25A36
FCGR2B
CELA2B
ARMCX6
ARMCX3
SLC25A42
PKP3
ABCD4
PAK4
DECR1
FST
CTSD
C1orf162
PDE4DIP
CHSY1
UHRF1
FMN1
CALCR
VWA2
EPS15L1
INSYN1
CSAD
MRFAP1
ELF1
ARHGEF18
CCR6
CA12
PRR5-ARHGAP8
PRR5
KRT19
MAD1L1
ABAT
KLF16
FOXK2
LONP2
ABCC11
SPATS2L
MIOS
ACSS1
TJAP1
CCDC198
GRIK3
DHX37
BRI3BP
RHOD
PLCD3
ACBD4
KAZN
TTC6
FOXA1
BDKRB1
ZNF79
MICOS10-NBL1
MICOS10
EHF
SLC25A47
DNPEP
ZFP36
PLEKHG2
MACC1
EREG
GRM4
SNAI1
COLEC12
RECQL4
MFSD3
LRRC14
B4GALT1
TCIRG1
NDUFS8
UGT2B15
TRH
LRP5L
GPC6
ADGRG1
COPS8
WWC1
PSD4
KAT6B
CERS2
ANXA9
SLC25A1
RCOR3
ARHGEF10L
EBF4
SERPINA1
LATS1
CDK3
BMP7
FUT4
RPS28
NDUFA7
ACACB
NFIB
SGCA
TPD52L2
ASB2
TMCC1
MFSD10
ATP13A3
PPP1R12B
NMNAT1
LZIC
CBWD5
CBWD3
ABHD16B
YPEL2
SIAH2
RERG
CAPN12
AGR3
ACIN1
SYNPO2L
ISYNA1
TMED8
SAMD15
AGPS
SYNE3
HDAC11
NPEPPS
ALG8
CDH26
IKBKG
G6PD
COL23A1
MRGPRG
FAM187A
CBWD6
MANBAL
IL2RB
GPSM1
KLK14
CBFA2T3
CTR9
ELAPOR1
C1orf194
FGR
ARAP3
VCAN
SULT2B1
ANKRD2
ZBTB46
SLC26A1
IDUA
PTGES
DSN1
ATP6AP2
RGL3
EFHD2
ANKH
SP2
TNNI2
PLEC
RETREG1
ETNK2
GFAP
MGAT3
CHST8
TNS1
SEMA3B
VEPH1
RABGEF1
SYNJ2
EDN1
UQCC2
PTPRN2
ZNF346
MYZAP
GCOM1
TLE1
B3GALNT1
NIPSNAP2
FAM228B
TTC9B
CCNP
ABHD2
DHRS3
NT5DC3
P2RY2
TP53I3
SF3B6
KCNIP2
LIMS1
PNKD
MAPKAPK3
CISH
SERPINA6
ST3GAL4
SLC25A19
FAM214A
NRP1
LRRC58
SVEP1
SLC35E2A
PRUNE1
MINDY1
CFAP206
UBALD1
MGRN1
TBKBP1
ZBTB45
SLC27A5
GDF15
PERP
NXNL2
ARID5B
MAT1A
ORAI2
TSSC4
NPIPB9
PXDC1
SURF4
GZMM
CDC34
SHC2
TBX1
CASTOR1
NDRG1
TFAP2A
AKNA
CBWD2
METTL26
TUBA3D
PLXNB1
SUSD3
SIDT2
PRSS27
NFE2L1
CYP4F2
SLC43A2
SCGB3A1
WNT16
RTN1
NXT1
MAGI3
COMTD1
FOXN1
LONRF2
REM2
LOC100130520
CD300H
C17orf77
WDR90
TUBA3E