ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9932073 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◢ SRX017710: CD4+ T cells

◢ SRX5090184: GM12878

◢ SRX10475642: Hep G2

◢ SRX10475643: Hep G2

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◢ SRX9932062: MCF-7

◢ SRX9932063: MCF-7

◢ SRX9932064: MCF-7

◢ SRX9932065: MCF-7

◢ SRX9932066: MCF-7

◢ SRX9932067: MCF-7

◢ SRX9932068: MCF-7

◢ SRX9932069: MCF-7

◢ SRX9932070: MCF-7

◢ SRX9932071: MCF-7

◢ SRX9932072: MCF-7

◣ SRX9932073: MCF-7

◢ SRX9932074: MCF-7

◢ SRX9932075: MCF-7

◢ SRX9932076: MCF-7

◢ SRX9932077: MCF-7

◢ SRX23330419: MDA-MB-231

◢ SRX23330420: MDA-MB-231

◢ SRX23330421: MDA-MB-231

◢ SRX23330422: MDA-MB-231

◢ SRX23330424: MDA-MB-231

◢ SRX23330425: MDA-MB-231

◢ HDAC6: STRING

IGFBP4
TMEM104
NAT9
GREB1
IER3
FLOT1
TFF1
RARA
IL24
TSKU
PDZK1
DCAKD
TMIGD3
ADORA3
FKBP4
CASP7
STARD10
CDC42EP1
LGALS2
PRLH
SLC25A25
NAIF1
VASN
HSPB8
MYOG
FAM174B
DGKZ
OSGIN1
ADAMTSL5
RAPGEFL1
PPP2R2C
FILIP1L
YIF1B
KCNK6
RPS6KL1
SBNO2
SPINK4
LMAN1L
CPLX3
RNF223
FREM2
NBPF4
ARPC1B
MLPH
NBPF6
SLC22A5
SYT12
N4BP3
GSG1L
PARD6B
SCOC
NFKBIA
ST8SIA6
TH
INS
OTUD7B
TTC39A
FOXK1
SNX24
AMBP
MSLN
ATP8B1
ATP6AP1
DNASE1L1
RET
BACE1
TPD52L1
UBE2T
MAP3K14
OVOL2
CANT1
C1QTNF1
CYP1B1
HAAO
TIPARP
FAM102A
SFXN2
ARL3
TMEM229B
AKAP1
AMZ1
CCDC88C
DUX4
SGK3
FASN
CXXC5
CHPT1
C19orf33
MAMDC4
EDF1
NEMP1
NAB2
CDH1
NHSL1
SRRM2
PDGFA
CTBP1
PADI4
ITPK1
CELSR2
LY6E
CAP2
HAPLN2
RAB40C
MANEAL
NBPF1
SLC9A3R1
MCF2L
GPRIN1
C1QTNF6
SLC7A5
MIDEAS
CTAG2
SLC25A24
LRRFIP2
FRG2C
KRT37
USP31
KDM4B
APOC3
APOA1
NAV2
ASB13
OLFML3
PTPA
CRAT
PAK4
STK11
MSMB
PPARGC1A
ZNF185
KEAP1
CST6
KRT8
MYB
UNKL
PLEKHH1
LRRC56
HRAS
B3GNT6
MYEOV
ALX4
SEPTIN9
YBEY
MCM3AP
SLC25A45
FRMD8
HEG1
AFF1
GRM4
LYPD6B
ATP5F1A
PLIN5
LRG1
PGLYRP2
ALDH3B1
RHOD
RECQL4
MFSD3
LRRC14
ADAM8
KLF16
CUEDC1
CSAD
KIF21A
IL19
ACOT6
RPS28
NDUFA7
CCN5
CABLES2
UPF1
DOK7
UHRF1
SMTNL2
KRT85
INSYN1
TJAP1
ADGRG1
TIFA
CRKL
KIAA0319
XAB2
SLC25A1
SLC9A3R2
SEC14L6
PKP3
IPPK
LAMC1
ZFP36
PLEKHG2
SLC25A36
CHSY1
KRT19
CTSD
SPTBN4
BLVRB
ESR1
B4GALT1
CDK3
ARMCX6
ARMCX3
MIOS
FBP1
ELF1
TPD52L2
ABHD16B
WWC1
PAXX
CLIC3
CERS2
ANXA9
CA12
NFE2L1
PLCD3
ACBD4
ZBTB37
ACIN1
FCGR2B
TMEM92
EPS15L1
SGCA
CLASP2
CASTOR1
VPS26C
CELA2B
SNAI1
PSD4
ELAPOR1
C1orf194
GPR37L1
SLC25A42
MAPT
TBX2
MICOS10-NBL1
MICOS10
SERPINF1
DMRT2
ABAT
ACSS1
RGL3
ARHGEF10L
PRR5-ARHGAP8
PRR5
ART1
VWA2
LRP5L
RGS10
TTC6
FOXA1
ASB2
PLXNB1
ABCD4
LATS1
FMN1
CCDC198
MRFAP1
KAZN
CELA2A
PDE4DIP
ARHGEF18
FOXK2
TCIRG1
NDUFS8
CCR6
FGR
GPC6
MRGPRG
COPS8
MACC1
ISYNA1
ATP13A3
SLC25A19
GRIK3
MGAT3
TBX1
MFSD10
CDH26
EDN1
LOC102724770
DGCR6
NIPSNAP2
PDE4C
ORAI2
SULT2B1
SYT8
ALG8
GZMM
CDC34
FRG2
C20orf203
MAD1L1
EBF4
SPOP
SLC26A1
IDUA
UQCC2
IL2RB
ANKRD2
CALCR
TST
MPST
UMODL1
FST
DSN1
SURF4
SIAH2
ZBTB45
SLC27A5
HDAC11
AKNA
TFAP2C
SYNE3
BDKRB1
TMCC1
LONP2
ABCC11
ZBTB46
PNKD
FUT4
FABP3
TRH
SYNPO2L
ARHGEF16
SPATS2L
PRUNE1
MINDY1
PRDX1
TUBA3E
SCARB1
TSEN54
CASKIN2
USF2
DNPEP
CBWD2
RERG
FOXO6
ARID5B
SYNJ2
EFHD2
CHST8
TTC9B
CCNP
SUSD3
B3GALNT1
ZNF79
RABGEF1
CBWD5
CBWD3
CBWD6
ETNK2
MAPKAPK3
CISH
SVIL
FAM228B
TP53I3
SF3B6
PRSS27
CDR2L
METTL26
WDR90
MAPK13
RCOR3
NEFH
DOT1L
PERP
TNNI2
P2RY2
ZNF346
SDC4
RNPEPL1
DUSP28
ANKMY1
ATP6AP2
MYLK2
MTA1
SERPINA6
PDLIM2
ZNF710
KAT6B
NT5DC3
SERPINA1
ZBTB7A
NMNAT1
LZIC
BMP7
CBFA2T3
ARAP3
AGPS
FBXW8
KCNIP2
ST3GAL4
FAM214A
PPP1R12B
SLC35E2A
MANBAL
ZFYVE28
CFAP99
ZBTB7B
NPIPB9
GPSM1
CTR9
TUBA3D
JUP
PXDC1
DNMT3A
UGT2B15
DEF6
ROBO3
LFNG
SPTB
DHRS3
SLC35E1
IVD
SLC25A47
FIGNL2
REM2
SLC37A1
NR2F6
SLC43A2
TBC1D14
CAPN12
TBKBP1
EHF
TNS1
DECR1
SHC2
TAX1BP1
CCDC9B
SLC1A5
VEPH1
SIDT2
LAMB2
MTRNR2L1
C1orf162
COMTD1
FOXN1
DLG4
ACADVL
CYP4F11
LTBP1
CD22
NPEPPS
PTH1R
FECH
FAM187A
GFAP
DDX10
SH2D3C
OXT
HSPB1
AP1B1
FUT7
C9orf139
ABCA2
RTEL1
STMN3
CLCN4
PI4KB
EREG
VCAN
PTGES
PLEC
SIN3B
DHX37
BRI3BP
GOLM1
NCAPH
ITPRIPL1
DNAJC5B
NPIPB6
NDRG1
TMEM210
LRRC26
HKDC1
PPL
SEMA3B
SPRY4
SLC45A4
NTMT1
C9orf50
NR2F2
TTC39C
ZNRF2
DMPK
EPB41L1
NDRG4
SULT1A4
SULT1A3
CAND1
SH3GLB2
MIGA2
MYZAP
GCOM1
SVEP1
OBSL1
INHA
ITGB2
ZMYND11
ATXN1
PCTP
TMEM95
KCTD11
AMOTL2
SLC37A3
RAB19
TDRD9
ATP5MPL
COLEC12
KLK14
PGGHG
NLRP6
UBALD1
MGRN1
SCGB3A1
B3GNT3
GDF15
ZNF746
IKBKG
G6PD
TTLL6
RNF144A
SLC29A1
MYMX
CGN
BCL3
TNK2
APTX
DNAJA1
TUBA1A
PTPRH
RTN1
TJP3
NT5C2
RCAN1
ASS1
JARID2
ZBTB5
SLC25A6
SCAMP4
ADAT3
ATG9B
ABCB8
SNX10
STC2
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
SDC1
HK1
OPN4
TWF2
PPM1M
PDCD6IP
ATP4A
TMEM147
HSPA4
TSSC4
CPNE6
CARMIL3
CYP4F2
MAGI3
EIF5AL1
RASEF
OGG1
LRRC58
RAI14
RMND5B
PRSS8
TRIM47
MTUS1
TMED8
SAMD15
LPCAT1
MIDN
CALML5
PLCB1
SLX1B
SLX1A
BOLA2B
BOLA2-SMG1P6
BOLA2
LENG1
TANGO2
ARVCF
RORC
C2CD4D
BOD1L2
ELFN2
VWA1
TMEM88B
NXNL2
ITGB5
ABR
CYP1A1
ZCWPW1
PPP1R35
MEPCE
PABPC1
YPEL2
ERN1
SLC16A3
TXNRD1
EMP2
WNT16
COX7A2L
RNF170
HOOK3
TBXA2R
ABCD3
PADI3
GRAMD1A
CFAP206
OAZ3
MRPL9
P2RX2
ABHD2
FNIP2
IL1F10
KLHL14
PTPRR
GLRX5
MRPS23
CYB561
COL18A1
AHCYL1
PMEPA1
SHCBP1
LASP1
EXT2
TCTA
RHOA
AMT
AGR3
TPTEP2-CSNK1E
TRPM7
LARGE1
ESRP2
TRIM16L
PDF
FSIP1
SLC6A6
MEF2A
ATG16L2
BHLHE40
CLPSL1
SEMA4G
TFAP2A
CCR7
CIB2
NAIP
SETD2
LCN8
LCN15
HSFX3
EOLA1
TBC1D16
UBL4A
SLC10A3
SHANK2
HASPIN
LOC100130520
CD300H
C17orf77
ZC2HC1C
ACYP1
PCYT1A
IMPA2
XBP1
RETREG1
TMEM120A
AHCY
USP17L21
USP17L20
USP17L12
USP17L22
GINS3
UBE2H
PEX10
GPR153
FAM234B
EPPK1
GAA
SLC19A1
MAB21L4
HID1
MACROH2A1
ASPG
S100P
CSK
RPS6KA2
RIPPLY1
CLDN2
DLC1
KLRC3
REEP5
RGS3
MFSD6
TTC28
SH3YL1
ACP1
COL26A1
ACACB
ACOX3
GPRC5A
KRT13
ANKH
MOCS1
TUBA8
NCOA3
RAB24
PRELID1
MXD3
MUC3A
FRMD5
GUCA2A
ADCY5
RXRA
SEMA3F
POU2F3
PATJ
TNS3
JUNB
HOOK2
USP17L13
USP17L11
USP17L18
USP17L10
COX5A
SLC35F6
PPCDC
SPATC1L
MTRNR2L2
MSH3
DHFR
MTRNR2L8
NFIB
KIF5C
COL23A1
SP2
PTPRN2
TLE1
LIMS1
NRP1
CCDC200
EAPP
MAT1A
RGPD2
RGPD1
ADARB1
SPAAR
HRCT1
CCNL1
NXT1
MAMDC2
PHRF1
LONRF2
WDR74
STX5
CRYAA2
CRYAA
GZF1
POLR3F
DZANK1
EPN1
GTPBP6
MTRNR2L10
ELOVL2
EMILIN2
ADORA1
CPA6
IER5L
DNM2
MTRNR2L9
LIMS4
LIMS3
TMEM212
IL20
LEMD2
TMEM242
RFX1
KLK13
TAF12
LOC102723996
ICOSLG
KLK12
DHRS2
CNOT3
CDH18
NLK
CDC42EP3
FGFBP2
HNRNPL
FAM3B
BAMBI
TSPEAR
KRTAP10-12
OSBP
RGS12
JPH2
C3
MTRNR2L6
MARCHF10
RHOBTB1
DDX47
EVI5L
APOA4
FAM184A
IMMP2L
PLEKHF1
DNAJA4
RALGPS2
CALHM4
ME3
FADD
TOM1L2
DRC3
H4C15
H4C14
H3C15
H3C14
HSP90AB1
PRSS22
BAIAP3
HOMER2
PRDM4
ASCL4
ARFGEF2
ANXA2
KLRF2
RPL13
EHD1
CIC
GATAD2A
MAPKAPK5
SSTR2
RBM43
POLDIP3
ZNF687
ZNF552
KCNH7
PPP2R5E
PABPN1
PARP16
TSPAN5
SHCBP1L
TRMT10B
CST9
ZNF385B
RABL6
CCDC183
RGS19
OPRL1
LKAAEAR1
PTMA
NBPF12
FARSB
PCIF1
PAX9
TP63
FBH1
ANKRD16
TPBG
CRK
ZNFX1
ZSWIM6
MERTK
ARHGAP29
TMEM107
PTP4A2
SIRT4
H2AC19
H2AC18
CDH11
PMF1-BGLAP
PMF1
TEX36
NPIPA3
NPIPA2
ENTPD8
USP17L17
USP17L15
LGR6
PALLD
KIF2C
PAQR5
PLA2G10
PGF
ABCA3
HUWE1
EXOSC5
BCKDHA
FUS
FYB2
UBE2I
SLC2A12
RBBP5
A4GALT
H4C12
H4C11
B2M
SPATA9
RHOBTB3
ATF4
NUP85
ANKHD1-EIF4EBP3
ANKHD1
TKTL2
ZMYND8
CPN2
PAX4
KLF10
DNMBP
ETV4
AFAP1
MICAL3
SART3
ISCU
KHSRP
UNC5B
LSMEM2
MYBPH
H2BC5
H1-4
BATF
RPS29
GJD3
PRSS23
BTNL9
PKIB
LCMT1
ADD3
H4C9
TTC21B
ANAPC7
SRSF7
ENHO
ZNHIT2
TM7SF2
LHX4
C1orf198
HOGA1
C10orf62
ANGEL1
KRT36
KRT35
MEIS1
UFM1
TCF21
CACNA1H
INAVA
MIEF1
ITGB3
DLL3
TRAF7
SASH3
RAB26
MED12L
GPD1L
ARPIN-AP3S2
ARPIN
DYSF
HSFX4
EOLA2
ENKUR
SEC14L5
HOXC6
HOXC5
ADAMTS16
AZGP1
ATP5MG
SH3BGR
LCA5L
GOSR2
C19orf48
TGIF1
PNO1
MRPS7
MIF4GD
GGA3
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12F
GAGE12B
SPINK13
SMAD3
ACBD6
NVL
GTF2B
HRK
ZNF576
IRGQ