ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX23330420 | MDA-MB-231
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◢ SRX017710: CD4+ T cells

◢ SRX5090184: GM12878

◢ SRX10475642: Hep G2

◢ SRX10475643: Hep G2

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◢ SRX9932062: MCF-7

◢ SRX9932063: MCF-7

◢ SRX9932064: MCF-7

◢ SRX9932065: MCF-7

◢ SRX9932066: MCF-7

◢ SRX9932067: MCF-7

◢ SRX9932068: MCF-7

◢ SRX9932069: MCF-7

◢ SRX9932070: MCF-7

◢ SRX9932071: MCF-7

◢ SRX9932072: MCF-7

◢ SRX9932073: MCF-7

◢ SRX9932074: MCF-7

◢ SRX9932075: MCF-7

◢ SRX9932076: MCF-7

◢ SRX9932077: MCF-7

◢ SRX23330419: MDA-MB-231

◣ SRX23330420: MDA-MB-231

◢ SRX23330421: MDA-MB-231

◢ SRX23330422: MDA-MB-231

◢ SRX23330424: MDA-MB-231

◢ SRX23330425: MDA-MB-231

◢ HDAC6: STRING

FRG2C
SPATC1L
SP2
DUX4
FRG2
DNM2
LEMD2
OSBP
HNRNPL
NLK
PABPN1
GATAD2A
RFX1
EVI5L
ZFP37
ZNF687
FBH1
ANKRD16
RABL6
CCDC183
VKORC1
BCKDK
CRK
INTS9
HMBOX1
TOM1L2
DRC3
CIC
LRIG2
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12F
GAGE12B
GAGE8
GAGE2E
GAGE2D
GAGE13
GRPEL1
PCIF1
NDRG2
ARHGEF40
MTRNR2L2
MSH3
DHFR
WIZ
MACROD1
TRIM45
RAD54L
UBE2L3
UNC5B
TOMM40
PRKACA
GPAM
NUP93
SH2D4B
ZNF654
CGGBP1
H1-7
NEU1
FAM193B
ADPGK
ANKHD1-EIF4EBP3
ANKHD1
FAM177A1
SLC25A42
RBM5
DNAJB5
SLC2A11
SRPRB
KHSRP
WDR97
MAF1
CYC1
HORMAD1
PIN4
SLC25A25
NAIF1
USP39
TMEM150A
RNF181
C2orf68
KDM4B
TANGO6
DYNLL2
RAB11B
AXL
NBPF1
GGT2
CRTAP
DCAF7
COL23A1
CIAO3
CCDC38
AMDHD1
TCF3
RASA4B
UGT1A4
UGT1A3
TRIP10
GPR108
TTC5
RCBTB1
SIMC1
RNF19B
OGDH
NUDT4B
TBC1D5
PACSIN2
TMEM60
PHTF2
ARHGEF5
TRAF2
ZMYM2
MAGI3
NUDT3
ARHGEF35
MIOS
TULP4
SNX12
KANSL1
GOLGA6L4
BLOC1S2
ZC3H6
STK11
KMT2A
TTC21B
BRAF
SAMD11
BAGE4
BAGE3
BAGE
DNAJC25-GNG10
DNAJC25
NUDT4
NXT1
MYH10
HOOK1
RBM26
PRELID3B
NOP14
GRK4
UBE2E2
MRTFA
PPP2R5A
JPT2
PSPC1
ZNF28
EIF3L
ANKRD54
CCDC200
MIER2
ZDHHC18
MFAP3L
METTL27
CLDN4
SLC25A53
FAM199X
HLA-F
DDX23
KAT6B
RNASE10
TPMT
KDM1B
ZDHHC9
RNF135
ACOT11
HDGF
PLAG1
CHCHD7
ETV3
CHD1L
HIGD1A
LPIN1
UQCRH
LRRC41
POLR2J
ZFYVE21
XRCC3
H2AZ2
METTL16
UBD
SMYD2
MRFAP1L1
FARP2
COLEC11
BLOC1S4
ANKRD39
TMSB15A
TMEM239
C20orf141
ARHGAP29
APPL2
STRIP1
XPNPEP1
PARK7
ABCB10
PCSK6
ANGEL1
AK2
CBR3
MORC1
GALNT11
TCEAL2
JOSD1
HDGFL2
GTPBP1
GLUD2
KIAA0319
TLN1
SLC40A1
SLC35D1
PTPN20
DNAH14
CREB3
ZZZ3
UBE2R2
TM2D3
PRKAA2
MUC12
DCUN1D4
BHLHB9
SOD2
ZNF665
WTAP
USP33
SCGB2A2
PLPPR5
MOS
CRELD1
CHGB
CCZ1B
SMAD2
POLR2J3
JAK1
TARS3
SLC25A12
LRRC74A
KCTD18
KCNS3
EPB41
EDEM2
C22orf39
AGK
PDGFD
TMX2
MED19
DENND1B
SLMAP
RDH16
RC3H1
PUM1
PDXDC1
LYPLA1
PPP2R3A
EIF1
TMCC3
SPIDR
SMIM10L2B
P4HA3
NR2C2
NFATC2IP
DEK
C1QBP
ARHGAP39
SULT1A1
HDAC4
CLVS2
CANX
ZNF48
TBC1D10B
MYLPF
PHF3
OPRD1
MAP1LC3B
FBXO31
PCDH9
IFITM3
IFITM1
HYAL1
GCLM
NFE2L1
GTF3C2
YWHAH
TRIM39-RPP21
TRIM39
TP53INP2
SEC63
SBF2
GTF2A1L
FTH1
DPY19L4
CDC25A
CCDC160
C22orf24
ATL2
AKAP1
TGDS
GPR180
GOLGA6L10
RBM17
LRCH4
FBXO24
ZNF326
VPS37B
VGLL3
TSKS
RFX6
PI4K2A
MORN4
LPAR3
GIMAP1-GIMAP5
GIMAP1
ELOA2
AP2A1
AKAP14
RAB40C
POFUT1
PLAGL2
ZNF584
UBN2
RNF225
MAP2K4
LRRC8B
INO80D
HDDC2
CNNM3
PLXNB2
EDARADD
TXLNA
RASGRF2
BEX1
USP17L21
USP17L20
USP17L12
USP17L13
USP17L11
USP17L18
USP17L10
PIP5K1B
G3BP1
SERPINB6
RAPH1
PARD3B
LRRC8A
KYAT1
CTTNBP2
COQ7
PKIB
RHCE
MACO1
HFM1
XPO5
POLH
LHPP
DNAH9
ID2
WNT2B
TRIM24
TMA7
RCC1L
FAM76A
CCDC51
ATRIP
ZCCHC3
UAP1
TCTEX1D1
SAP30L
MED26
IFITM2
HTATSF1
C20orf96
C1QTNF12
BRS3
ADA
UHRF1BP1
TMTC1
SUV39H2
SMOX
ARHGAP19
ARAP3
KCNF1
DSE
RABGEF1
TFPI
MTHFD1L
GINS3
ZNF275
SEPHS2
SDCCAG8
RGS2
KMT5B
HOXA1
CEP170
CDKL1
AKR1B1
ARFGEF2
DTNB
VHL
UBL5
TMEM164
RRAGD
PIN1
MIER1
MAP7D3
ELL
DNAI4
DHX30
CTNNBL1
CPSF6
CPLX2
AUH
LEPR
CHRDL1
PRR5-ARHGAP8
PRR5
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
FAM53C
CDC25C
RGS6
VARS1
SLIT3
SIPA1L1
RALGAPA1
PALM2AKAP2
MRAS
KCNA3
FCHO2
FANK1
CYLD
CNOT6
CITED1
BEX2
ABCA5
ST6GALNAC3
FAR1
DNAJC6
DAPK3
SLC6A6
FGF18
FAF1
CDKN2C
STON2
SMURF1
RPL30
PSEN2
PDE4B
NDST3
CFAP300
CHMP5
BAG1
WEE2
TSPAN10
SNX7
SAMD5
RTP3
POGLUT3
NPLOC4
LTF
LRP12
GNG12
DPYD
DENND11
ADCK2
ACOX3
RAB5B
PMEL
CDK2
ZSWIM4
YBX3
TRMT44
TPK1
SULT1A2
STRBP
SPAG8
RBX1
PRIMA1
MS4A1
MAPK8IP3
MAP7
KCTD13
HINT2
FAM168B
CPOX
CDH24
B3GALNT2
ARIH2
TMEM61
SLC12A9
NFIA
LRRC37A3
LMO4
LGR5
EPHB4
CSNK1E
CHST3
ANXA5
MAPKAPK5
NCOA7
TMED5
SYTL4
SLC4A7
SLC16A2
RGS7
PLEKHA1
GORASP2
GLG1
FBXO5
DEGS1
C16orf72
AP3M2
ADAMTSL3
TRMT10C
VAMP4
TXNDC5
RGPD4
LGR4
HHIP
FYN
FHL1
FBXO30
FAM20B
ETNK1
EPHB6
DGCR8
CYREN
CT47A9
CT47A8
CT47A7
CT47A6
CT47A5
CT47A4
CT47A3
CT47A2
CT47A12
CT47A11
CT47A10
CT47A1
ATP6AP1
H4C12
H4C11
UNC5A
GGA2
ULBP1
UBTD2
SYNC
SERPINB9
PDCD2
MAP10
GDI1
FAM50A
CSRP2
FILIP1L
ELK4
ZFAND2A
TLCD5
SLC35F4
SF1
RAB8A
PROK2
OMP
LAPTM4B
ELL2
DENND6A
CTNNAL1
CACHD1
HK1
TBC1D28
STK10
SMARCC1
SLC44A5
PRKACB
POLD2
PCGF5
MOV10
LYRM9
LRIG1
EFCAB9
DIAPH2
CTF1
BCL7C
SULT1A4
SULT1A3
TICAM2
TIAM1
MKRN1
LOC150051
GRK6
DIP2B
GAGE12G
GAGE12D
GAGE12H
GAGE12E
GAGE12C
CALHM6
ZNF558
VCP
TPST2
PEX7
OSTF1
ODC1
NMRK1
MCOLN3
GRHL3
FANCG
F3
EIF3C
DOCK7
CYTH2
CTNNB1
CD276
C15orf61
ATG9A
ANO10
ANKZF1
ABHD5
NT5DC3
JARID2
KCTD1
EIF4E3
KCNB2
UBE2S
MARS1
ARHGAP9
ZSWIM7
TTC19
TMEM185A
TEX10
TARBP1
RBM15B
NOCT
MAST2
MANF
HPRT1
HESX1
CTBS
C2orf69
BTG3
ARHGEF12
APPL1
PARD6B
RALGPS2
ZNF860
TRAP1
TFDP2
SHD
PRR16
OSBPL10
NMI
MYCBP2
MAP3K21
LAMA5
ITPRIPL2
WSCD2
VPS4A
TMEM98
TEAD3
ST3GAL3
SNRK
SLC9A8
RCN2
GXYLT1
FAM89A
ELF4
DACT1
C12orf75
ADAM15
PDE4DIP
SESN1
GAREM1
TMEM158
SRRD
SPRY1
SNRNP25
RAB11FIP2
POLR3K
NREP
HPS4
FADS3
CYB5R1
BMP2K
ADIPOR1
TMEM229B
PLEKHH1
IMMP2L
PEX10
FGFR1
TOM1
TMED2
PCBP3
MPP6
MBNL3
GPR146
DENND2D
MFSD6
SETD2
GLRX5
STK17A
STAC
RYR2
RIC1
PGBD5
P3H1
KRCC1
FKBP5
EIF2AK3
DACT3
CNNM2
C5orf34
BARHL2
GPD1L
ATXN7
SLIT2
SLC4A11
LIG3
GPC5
CCSAP
ASB1
ARHGEF11
RAB24
PRELID1
MXD3
MFSD14A
TLE4
THSD7A
PPM1H
OSTM1
LMBR1
LHFPL2
CLTB
C7orf50
ACBD6
XPO4
TNFSF13
STRN
SERINC2
SENP3
ROBO2
NXF3
NOTCH2NLA
MAN1A1
MAFF
CSNK1G2
ASNS
ARHGAP36
MAPK1
ZNF566
SPATA2
SLC36A4
RHEB
RAB4A
LY75-CD302
LY75
LAD1
KIF27
GAN
FNBP1L
FAM8A1
ERAP1
SH3BGR
LCA5L
ATF3
ACTR1B
CEP350
ZNF32
ZNF281
ZCCHC18
TRIM11
TPRG1L
TBC1D10C
SLC2A1
RNF166
RAD9A
QSER1
PRDM11
PPP1CA
MCUR1
GLIPR2
ENDOV
CTU2
BOC
APCDD1L
DHX37
BRI3BP
GAGE2C
GAGE2B
GAGE2A
GAGE1
TMEM79
SMG5
DYNC2I1
ZNF318
VDAC3
URB2
UBA3
TBC1D4
TAF5L
SLC25A43
RPL6
RORA
ROR2
PTS
PTPN11
PRR7
PREX2
OR10AC1
NEK7
MATN3
KIF5B
HIP1
GLRX3
FAM207A
DCBLD1
DAG1
CREG1
CD59
C11orf24
ARL6IP5
UPF1
USP17L17
USP17L15
STK40
ZNF652
VPS36
SFT2D3
PELI2
DIDO1
CKAP2
LATS1
ERN1
GET4
TCF7L2
FAM151B
ZNF84
VANGL1
UBE2L6
SMC1B
SEH1L
RP9
RIBC2
PTPRU
MECR
MAP11
LHFPL6
LAMTOR4
IQSEC1
GAL3ST4
FBXL3
FAM162B
BEX4
ASTN2
AKAP5
FAM228B
SP1
CIBAR1
XRCC2
TRAM1
TAF7L
SMARCA1
SLC25A15
PXK
PRKG1
PHC2
PGS1
PFN4
NKRF
NAA20
METTL9
MAPK8
MAP4K5
LRRC8D
HSPA4L
GSDME
GDF10
FBXO9
FAIM
CILK1
CCS
CCDC87
ATP6V1C2
ATL1
ASF1A
CDC42EP1
SLC25A24
PLAGL1
WAPL
TCEAL6
SLITRK5
NPHS2
NOTCH2NLC
MANSC4
LPGAT1
LMO2
KLHL42
KCTD3
IQSEC3
HDHD5
CMTM8
PTP4A2
PRSS23
LETM1
HNRNPAB
ZNF311
STARD7
SSX2IP
SPATA6
SOWAHD
SGPP2
PRKD3
MAPKAP1
MAP3K2
LCORL
HEBP2
GOLGA7B
GOLGA6L7
FKBP9
C2
ARMCX4
SYNJ2
AP2B1
ZBTB18
URGCP
UBE2D4
TTC9C
SIK2
SERP2
SDK1
RCE1
PAXBP1
MORC4
KIF3A
ITM2B
HNRNPUL2
DESI2
CKAP4
CCNI2
CASR
CLTA
TBC1D10A
PIAS2
PDCD6
NPTN
NOS1AP
KATNAL2
CROCC
ASAP1
SECISBP2
CKS2
CHN1
ZNF329
SLAIN1
SIPA1L2
RAB3IL1
QSOX1
PTPN2
PTP4A1
PHIP
NUP153
MAP3K1
KLHDC2
CLIP4
CEP112
ACTR3B
PXDC1
RAI14
IL17RB
CHDH
MKRN2OS
MKRN2
WDR45B
VPS13C
TMEM71
SLC45A3
RWDD2B
PNRC2
PHF20L1
NEURL3
MCM6
KLHL7
IBA57
F2RL1
ENGASE
CMTM7
CAMSAP2
C2CD4A
ARL2BP
USP17L22
YAF2
TMEM171
SKIDA1
PRKD1
PRKCZ
PDZRN3