ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9932077 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◢ SRX017710: CD4+ T cells

◢ SRX5090184: GM12878

◢ SRX10475642: Hep G2

◢ SRX10475643: Hep G2

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◢ SRX9932062: MCF-7

◢ SRX9932063: MCF-7

◢ SRX9932064: MCF-7

◢ SRX9932065: MCF-7

◢ SRX9932066: MCF-7

◢ SRX9932067: MCF-7

◢ SRX9932068: MCF-7

◢ SRX9932069: MCF-7

◢ SRX9932070: MCF-7

◢ SRX9932071: MCF-7

◢ SRX9932072: MCF-7

◢ SRX9932073: MCF-7

◢ SRX9932074: MCF-7

◢ SRX9932075: MCF-7

◢ SRX9932076: MCF-7

◣ SRX9932077: MCF-7

◢ SRX23330419: MDA-MB-231

◢ SRX23330420: MDA-MB-231

◢ SRX23330421: MDA-MB-231

◢ SRX23330422: MDA-MB-231

◢ SRX23330424: MDA-MB-231

◢ SRX23330425: MDA-MB-231

◢ HDAC6: STRING

IGFBP4
GREB1
TFF1
IER3
FLOT1
CASP7
RARA
TMEM104
NAT9
TSKU
FKBP4
TMIGD3
ADORA3
IL24
HSPB8
ADAMTSL5
PDZK1
DCAKD
CDC42EP1
LGALS2
MYOG
PRLH
STARD10
SLC25A25
NAIF1
PPP2R2C
FAM174B
OSGIN1
YIF1B
KCNK6
RPS6KL1
SBNO2
ARPC1B
RAPGEFL1
VASN
NBPF4
N4BP3
SLC22A5
RNF223
FREM2
GSG1L
NBPF6
FILIP1L
SCOC
PARD6B
CANT1
C1QTNF1
SPINK4
LMAN1L
CPLX3
FOXK1
MLPH
TH
INS
CTBP1
ST8SIA6
SNX24
TTC39A
DGKZ
OTUD7B
ATP8B1
SYT12
MCF2L
RET
UBE2T
MSLN
SFXN2
ARL3
MAMDC4
EDF1
TPD52L1
CCDC88C
MAP3K14
HAAO
C19orf33
PADI4
OVOL2
SLC25A24
MANEAL
CELSR2
NEMP1
NAB2
SGK3
AKAP1
SRRM2
BACE1
ASB13
TIPARP
DUX4
ATP6AP1
DNASE1L1
CYP1B1
AMBP
KDM4B
TMEM229B
ZNF185
NFKBIA
YBEY
MCM3AP
CAP2
SLC7A5
AMZ1
B3GNT6
CHPT1
LY6E
PAXX
CLIC3
CTAG2
STK11
LYPD6B
USP31
KRT37
PTPA
CRAT
FAM102A
NHSL1
CABLES2
FASN
C1QTNF6
LRRFIP2
PKP3
SLC9A3R1
NBPF1
SEC14L6
LRRC56
HRAS
ITPK1
PPARGC1A
GPRIN1
HAPLN2
PDGFA
NAV2
OLFML3
CST6
CXXC5
ALX4
ATP5F1A
PLEKHH1
SPTBN4
BLVRB
APOC3
APOA1
CRKL
MSMB
AFF1
ALDH3B1
CDH1
UPF1
IL19
CHSY1
FRG2C
DOK7
PAK4
MYB
LAMC1
HEG1
SLC25A45
FRMD8
UNKL
CLASP2
SNAI1
VPS26C
KAZN
MYEOV
KRT85
KEAP1
ESR1
PGLYRP2
SLC25A36
SYT8
CELA2A
CTSD
WWC1
PRR5-ARHGAP8
PRR5
IPPK
RAB40C
SERPINF1
TIFA
MIDEAS
FST
B4GALT1
CCN5
RPS28
NDUFA7
SLC25A1
UMODL1
KLF16
ACSS1
ACOT6
RECQL4
MFSD3
LRRC14
KCNIP2
KRT8
XAB2
SMTNL2
ADGRG1
PLIN5
LRG1
FCGR2B
GPR37L1
MFSD10
FOXK2
SLC9A3R2
SEPTIN9
ABCD4
KIAA0319
PLCD3
ACBD4
EPS15L1
INSYN1
CAPN12
UHRF1
ADAM8
CUEDC1
TCIRG1
NDUFS8
KIF21A
CERS2
ANXA9
SGCA
CDK3
ZBTB37
PPP1R12B
PDE4C
GRM4
MICOS10-NBL1
MICOS10
SLC25A19
CBFA2T3
ATP13A3
ASB2
CCDC198
GPC6
APTX
DNAJA1
SPOP
ZBTB46
CSAD
SYNPO2L
SEMA3B
PRDX1
COPS8
RGS10
TBX2
FBP1
CCR6
ZBTB45
SLC27A5
SPATS2L
MAD1L1
TTC6
FOXA1
ARHGEF18
CA12
CELA2B
TRH
SLC25A42
MIOS
DMRT2
RGL3
B3GALNT1
ALG8
LOC102724770
DGCR6
ACIN1
DECR1
ZFP36
PLEKHG2
MGAT3
DSN1
RHOD
ARMCX6
ARMCX3
DNPEP
C1orf162
ABAT
CBWD5
CBWD3
ATP6AP2
AKNA
RCOR3
GPSM1
KRT19
MACC1
VWA2
CALCR
FGR
OAZ3
MRPL9
TJAP1
SIAH2
DHX37
BRI3BP
ISYNA1
MRGPRG
PNKD
FUT4
PDE4DIP
UGT2B15
FRG2
RETREG1
AGPS
IL2RB
PSD4
TUBA3E
EBF4
TFAP2C
ARAP3
SYNE3
VEPH1
DHRS3
LATS1
TAX1BP1
DLG4
ACADVL
TPD52L2
ABHD16B
LONP2
ABCC11
NAIP
LRP5L
ANKRD2
WNT16
FMN1
TMCC1
CHST8
RABGEF1
GRIK3
MAPT
ELF1
P2RY2
SULT2B1
SLC26A1
IDUA
NT5DC3
TUBA3D
LTBP1
CDH26
SERPINA6
REM2
NRP1
SVIL
LRRC58
ARHGEF10L
TNS1
NPIPB9
ART1
CTR9
NXNL2
TMED8
SAMD15
DEF6
TMEM92
CASTOR1
GZMM
CDC34
ZFYVE28
CFAP99
RNPEPL1
DUSP28
ANKMY1
PRUNE1
MINDY1
FAM228B
TP53I3
SF3B6
FAM187A
GFAP
SURF4
SLC25A47
HDAC11
ELAPOR1
C1orf194
EFHD2
SYNJ2
NEFH
TRPM7
SERPINA1
ETNK2
SHC2
CLCN4
JUP
DOT1L
ZNF79
PTGES
VCAN
LIMS1
NFE2L1
TST
MPST
PLEC
SLC29A1
MYMX
EDN1
CDR2L
TBX1
ZNHIT2
TM7SF2
MRFAP1
MTRNR2L1
EIF5AL1
ITGB5
PDCD6IP
COLEC12
TNNI2
PRSS27
CBWD6
METTL26
WDR90
NFIB
FBXW8
USF2
PMEPA1
NTMT1
C9orf50
UBALD1
MGRN1
EPB41L1
MYLK2
TSEN54
CASKIN2
OXT
ATXN1
FAM214A
RTEL1
STMN3
LOC100130520
CD300H
C17orf77
ORAI2
ROBO3
LAMB2
DMPK
NMNAT1
LZIC
PDLIM2
FABP3
ZNF346
SIDT2
AMOTL2
FOXN1
IMMP2L
YPEL2
ANKH
EXT2
DLC1
PLXNB1
TBC1D14
SDC1
PXDC1
DNMT3A
HID1
ARHGEF16
SLC25A6
GDF15
NIPSNAP2
AHCY
MAPKAPK3
CISH
ZBTB42
AKT1
PERP
CD22
EREG
ERN1
FNIP2
ANXA2
NXT1
GZF1
RNF144A
COMTD1
NT5C2
LSMEM2
RERG
CPN2
SLC1A5
LOXL4
CFAP206
SLC35E1
ATP4A
ELFN2
MYZAP
GCOM1
LONRF2
KAT6B
FUT7
C9orf139
ABCA2
FOXO6
TUBA1A
FIGNL2
AGR3
MANBAL
CCR7
DDX10
RCAN1
PEX10
C20orf203
NDRG1
ADORA1
JUND
IQCN
TMEM95
KCTD11
PLCB1
MIDN
COX7A2L
SPATA9
RHOBTB3
SVEP1
CBWD2
KLRC3
HOGA1
C10orf62
MAT1A
PI4KB
KLF10
UQCC2
RNF170
HOOK3
OBSL1
INHA
SCARB1
ZNF710
GLRX5
SLC37A1
BDKRB1
TTC9B
CCNP
MED12L
SLC45A4
ZNF91
FGFBP2
SHANK1
CLEC11A
SUSD3
MTA1
SH3YL1
ACP1
CALML5
MAGI3
RPL13
ST3GAL4
ZMYND11
ZBTB7B
HSPA4
AP1B1
ARID5B
SIN3B
ADCY9
BCL3
SH3GLB2
MIGA2
PTH1R
ZNF746
ZBTB5
GOLM1
SPRY4
DDX47
ELF5
IL1F10
USP17L21
USP17L20
USP17L12
USP17L22
SLC46A3
D2HGDH
TIAF1
TDRD9
ATP5MPL
CAND1
STC2
SEC14L5
C4orf19
PPP1R9B
TTC39C
MAPK13
RPS6KA2
CCDC9B
TTLL6
TMEM147
NPIPB6
TBXA2R
UBL4A
SLC10A3
MTUS1
PPL
EMP2
ABR
TPTEP2-CSNK1E
SCGB3A1
IL20
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2-SMG1P6
BOLA2
APOA4
ZBTB7A
SEMA4G
HSH2D
NECAB3
ACTL10
SLC35E2A
BOD1L2
KLK12
TRMT10B
NDRG4
LCMT1
NNMT
NBPF15
TSSC4
WDR74
STX5
LFNG
BAIAP3
NCAPH
ITPRIPL1
NPEPPS
PCYT1A
BHLHE40
PGF
NR2F6
VWA1
TMEM88B
MIPOL1
TMEM210
LRRC26
BMP7
ADARB1
MAP2K5
LILRB5
RTN1
PROP1
HK1
IVD
ATG16L2
ZC2HC1C
ACYP1
TBKBP1
HSP90AB1
TMEM120A
GINS3
SOD2
ORMDL3
INPP4B
GSDMB
ACAT2
SNX10
ASPG
LPCAT1
SLC19A1
UBE2H
UBE2I
GRAMD1A
SETD2
SH2D3C
GPR153
TUBA8
PTPRR
NR2F2
UBTF
KRT13
SOAT2
IGFBP6
ARHGEF28
CSK
CYP4F11
IKBKG
G6PD
LIMS4
LIMS3
FRMD5
TTC28
TANC2
JUNB
HOOK2
SPATC1L
MTRNR2L2
MSH3
DHFR
EHF
MTRNR2L8
ACACB
KIF5C
COL23A1
KLK14
SP2
PTPRN2
TLE1
ABHD2
CCDC200
EAPP
RGPD2
RGPD1
TFAP2A
SPAAR
HRCT1
CCNL1
CYP4F2
SLC43A2
MAMDC2
PHRF1
CRYAA2
CRYAA
POLR3F
DZANK1
SDC4
SHANK2
EPN1
GTPBP6
MTRNR2L10
DNAJC5B
ELOVL2
EMILIN2
CPA6
IER5L
DNM2
MTRNR2L9
TMEM212
LEMD2
TXNRD1
FSIP1
TMEM242
RFX1
KLK13
TAF12
LOC102723996
ICOSLG
MFSD6
DHRS2
CNOT3
CDH18
SLC37A3
RAB19
NLK
CDC42EP3
RIPPLY1
CLDN2
HNRNPL
FAM3B
BAMBI
ACOX3
TSPEAR
KRTAP10-12
OSBP
RGS12
JPH2
C3
MTRNR2L6
SPTB
MARCHF10
RHOBTB1
EVI5L
ADCY5
MUC3A
PABPC1
GPRC5A
FAM184A
PLEKHF1
DNAJA4
ATG9B
ABCB8
RGS3
RALGPS2
HKDC1
CALHM4
ME3
FADD
TOM1L2
DRC3
H4C15
H4C14
H3C15
H3C14
HSFX3
EOLA1
HSPB1
RMND5B
PRSS22
SLC6A6
USP17L13
HOMER2
PRDM4
ASCL4
ARFGEF2
KLRF2
EHD1
CIC
GATAD2A
MAPKAPK5
ITGB2
SSTR2
USP17L11
RBM43
POLDIP3
ZNF687
ZNF552
TWF2
PPM1M
KCNH7
MEF2A
PPP2R5E
PABPN1
PARP16
TSPAN5
USP17L18
SHCBP1L
FAM234B
JARID2
CST9
ZNF385B
RABL6
CCDC183
RGS19
OPRL1
LKAAEAR1
ABCD3
PTMA
NBPF12
FARSB
PCIF1
PAX9
TP63
FBH1
ANKRD16
TPBG
CRK
ZNFX1
ZSWIM6
MERTK
ARHGAP29
TMEM107
USP17L10
PTP4A2
SIRT4
H2AC19
H2AC18
CDH11
PMF1-BGLAP
PMF1
ZNRF2
TEX36
NPIPA3
NPIPA2
ENTPD8
USP17L17
USP17L15
LGR6
PALLD
LENG1
KIF2C
PAQR5
PLA2G10
B3GNT3
ABCA3
HUWE1
RASEF
PADI3
EXOSC5
BCKDHA
LARGE1
FUS
FYB2
EPPK1
TNK2
RAI14
SLC2A12
RBBP5
A4GALT
H4C12
H4C11
B2M
ATF4
TJP3
NUP85
CIB2
ANKHD1-EIF4EBP3
ANKHD1
TKTL2
ZMYND8
ASS1
PAX4
DNMBP
ETV4
AFAP1
OPN4
FECH
MICAL3
CPNE6
CARMIL3
SART3
ISCU
KHSRP
UNC5B
S100P
MYBPH
H2BC5
H1-4
BATF
RPS29
GJD3
PRSS23
BTNL9
PKIB
HASPIN
ADD3
H4C9
TTC21B
COL26A1
ANAPC7
SRSF7
ENHO
CYB561
ESRP2
SLC16A3
LHX4
C1orf198
ANGEL1
KRT36
KRT35
MEIS1
UFM1
TCF21
CACNA1H
INAVA
MIEF1
RXRA
MAB21L4
ITGB3
DLL3
TRAF7
SASH3
RAB26
GPD1L
ARPIN-AP3S2
ARPIN
TBC1D16
DYSF
MOCS1
HSFX4
EOLA2
ENKUR
HOXC6
HOXC5
ADAMTS16
AZGP1
ATP5MG
SH3BGR
LCA5L
GOSR2
C19orf48
TGIF1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
PNO1
MRPS7
MIF4GD
GGA3
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12F
GAGE12B
SPINK13
SMAD3
ACBD6
NVL
GTF2B
HRK
NCOA3
ZNF576
IRGQ
IMPA2
FBN1
ZRANB2
ZNF335
SF3B3
COG4
RAB5B
PMEL
CDK2
IRF2BPL
GRPEL1
EEF1A1
MYH11
H2BC15
H2AC15