ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9932065 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◢ SRX017710: CD4+ T cells

◢ SRX5090184: GM12878

◢ SRX10475642: Hep G2

◢ SRX10475643: Hep G2

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◢ SRX9932062: MCF-7

◢ SRX9932063: MCF-7

◢ SRX9932064: MCF-7

◣ SRX9932065: MCF-7

◢ SRX9932066: MCF-7

◢ SRX9932067: MCF-7

◢ SRX9932068: MCF-7

◢ SRX9932069: MCF-7

◢ SRX9932070: MCF-7

◢ SRX9932071: MCF-7

◢ SRX9932072: MCF-7

◢ SRX9932073: MCF-7

◢ SRX9932074: MCF-7

◢ SRX9932075: MCF-7

◢ SRX9932076: MCF-7

◢ SRX9932077: MCF-7

◢ SRX23330419: MDA-MB-231

◢ SRX23330420: MDA-MB-231

◢ SRX23330421: MDA-MB-231

◢ SRX23330422: MDA-MB-231

◢ SRX23330424: MDA-MB-231

◢ SRX23330425: MDA-MB-231

◢ HDAC6: STRING

IGFBP4
GREB1
TFF1
TMIGD3
ADORA3
TMEM104
NAT9
RARA
IL24
PDZK1
MYOG
IER3
FLOT1
TSKU
CASP7
FKBP4
SLC25A25
NAIF1
STARD10
OSGIN1
PRLH
FILIP1L
HSPB8
FAM174B
FREM2
PPP2R2C
NBPF4
SPINK4
SBNO2
RNF223
VASN
TPD52L1
OVOL2
PARD6B
NBPF6
LMAN1L
CPLX3
AMBP
ADAMTSL5
SGK3
SLC22A5
GSG1L
DGKZ
DCAKD
CAP2
TMEM229B
CDH1
CDC42EP1
LGALS2
ST8SIA6
YIF1B
KCNK6
SYT12
CYP1B1
ATP6AP1
DNASE1L1
RAPGEFL1
RPS6KL1
NAV2
NBPF1
CELSR2
UBE2T
CHPT1
SLC9A3R1
TTC39A
MLPH
PLEKHH1
RET
KRT8
CCDC88C
KRT37
PPARGC1A
DUX4
SFXN2
ARL3
KDM4B
SCOC
AMZ1
NHSL1
TH
INS
PTPA
CRAT
HAAO
CANT1
C1QTNF1
HEG1
TMEM92
N4BP3
TIPARP
BACE1
IL19
MSMB
MYB
XAB2
FASN
ARPC1B
MANEAL
HAPLN2
C19orf33
SLC25A24
NFKBIA
PDGFA
MYEOV
B3GNT6
CXXC5
ZNF185
ITPK1
AKAP1
SNX24
GPRIN1
USP31
LY6E
UPF1
SLC7A5
FOXK1
ACOT6
ESR1
NEMP1
NAB2
RGS10
MRFAP1
MAP3K14
SRRM2
TFAP2C
YBEY
MCM3AP
ATP5F1A
C1QTNF6
SEC14L6
ATP8B1
SERPINF1
OTUD7B
TBX2
APOC3
APOA1
SMTNL2
MIDEAS
DMRT2
EHF
STK11
LRRFIP2
FMN1
DECR1
SLC25A45
FRMD8
CCN5
CTAG2
LAMC1
KEAP1
AFF1
UMODL1
SPOP
IPPK
TJAP1
GPR37L1
COLEC12
MAPT
SPTBN4
BLVRB
FAM102A
MCF2L
PGLYRP2
ADAM8
FRG2C
PLIN5
LRG1
DOK7
FBP1
MSLN
KRT85
CELA2A
TTC6
FOXA1
VWA2
SEPTIN9
DNPEP
PADI4
CSAD
CUEDC1
KIF21A
ABCD4
ZNF79
VPS26C
ARMCX6
ARMCX3
ASB13
UHRF1
ABAT
KAT6B
KRT19
FST
BDKRB1
PDE4DIP
PAK4
ACACB
UGT2B15
FCGR2B
CRKL
CELA2B
LONP2
ABCC11
ARHGEF18
NPEPPS
KLK14
INSYN1
PAXX
CLIC3
SLC25A47
RAB40C
MAMDC4
EDF1
BMP7
UNKL
TLE1
CALCR
ALX4
RCOR3
EREG
TIFA
SLC25A42
DHX37
BRI3BP
SERPINA1
CTBP1
CABLES2
MACC1
GRIK3
ELF1
IKBKG
G6PD
EPS15L1
CCR6
C1orf162
AGR3
LYPD6B
SLC25A36
CTSD
NFIB
UQCC2
ALDH3B1
FUT4
KIAA0319
ARHGEF10L
SCGB3A1
ABHD2
CA12
FOXK2
YPEL2
SPATS2L
PLCD3
ACBD4
SVIL
SYT8
TTC9B
CCNP
NT5DC3
MAD1L1
RERG
TBKBP1
ACSS1
EBF4
CHSY1
CDH26
LRP5L
LOC102724770
DGCR6
MIOS
LATS1
ZFP36
PLEKHG2
ADGRG1
OLFML3
TRH
SULT2B1
SYNE3
MRGPRG
TMED8
SAMD15
CCDC198
ETNK2
VCAN
SVEP1
SYNJ2
CFAP206
CST6
SIDT2
MAPKAPK3
CISH
SLC35E2A
ZBTB37
PSD4
ST3GAL4
TNNI2
MYZAP
GCOM1
GRM4
TMCC1
PRR5-ARHGAP8
PRR5
NMNAT1
LZIC
FRG2
MANBAL
CYP4F2
BAMBI
NXNL2
ISYNA1
RHOD
TUBA1A
ELAPOR1
C1orf194
CBWD5
CBWD3
EFHD2
HDAC11
MAT1A
LRRC56
HRAS
WWC1
KLF16
ARID5B
SLC1A5
TNS1
ANKH
TXNRD1
C20orf203
PTGES
ADARB1
MAGI3
COPS8
CBWD6
ZNF346
DNAJC5B
ACOX3
GDF15
SGCA
SYNPO2L
LIMS1
SCARB1
TPD52L2
ABHD16B
SLC45A4
VEPH1
SLC43A2
PRSS27
TSSC4
CLASP2
FOXN1
SIAH2
CDC42EP3
FAM187A
GFAP
TFAP2A
EPB41L1
CDK3
TMEM212
CPA6
CERS2
ANXA9
NDRG1
ATP13A3
MICOS10-NBL1
MICOS10
SDC4
CCNL1
IL2RB
ADORA1
PDE4C
PPP1R12B
ANKRD2
CHST8
TCIRG1
NDUFS8
PRDX1
AGPS
LONRF2
TSPEAR
KRTAP10-12
TMEM210
LRRC26
SHANK2
HSPA4
PKP3
CST9
ART1
NIPSNAP2
FAM184A
CTR9
FGR
PERP
ELOVL2
PLEC
EDN1
GPSM1
ARAP3
RETREG1
CYP4F11
KAZN
RPS6KA2
SSTR2
MGAT3
FAM214A
SLC25A1
CBFA2T3
FAM3B
FAM228B
P2RY2
TP53I3
SF3B6
LFNG
ASB2
RTN1
CCR7
NR2F2
KLK13
B4GALT1
TMEM95
KCTD11
MARCHF10
GPC6
ATP6AP2
REM2
SURF4
HK1
CASTOR1
APOA4
PXDC1
RGS3
DSN1
LOC100130520
CD300H
C17orf77
SPRY4
GOLM1
RHOBTB1
ADCY5
CCDC9B
EIF5AL1
COMTD1
FSIP1
TTC39C
DHRS3
ZSWIM6
B3GALNT1
DHRS2
RALGPS2
ME3
PTPRR
LIMS4
LIMS3
ARHGAP29
SNAI1
RNF144A
PCYT1A
TWF2
PPM1M
CACNA1H
TPBG
CAPN12
LOC102723996
ICOSLG
TBX1
TBXA2R
JARID2
MERTK
LRRC58
ARFGEF2
ALG8
PRUNE1
MINDY1
SUSD3
SLC26A1
IDUA
UBE2H
COX7A2L
FRMD5
ZMYND8
TUBA3D
ETV4
PRDM4
ASCL4
ENHO
CDR2L
SLC9A3R2
ATG9B
ABCB8
BOD1L2
PNKD
TSPAN5
IER5L
KCNH7
NT5C2
KLK12
FAM234B
ZFYVE28
CFAP99
MFSD6
ACIN1
AKNA
FIGNL2
HSFX3
EOLA1
SLC6A6
RECQL4
MFSD3
LRRC14
MYLK2
GINS3
GZMM
CDC34
TPTEP2-CSNK1E
ITGB2
B3GNT3
NXT1
GZF1
IL20
ZNF385B
GPRC5A
PAQR5
JUP
ABCA3
KRT24
TBC1D14
UBALD1
MGRN1
PLCB1
MFSD10
ZNF552
GRAMD1A
RIPPLY1
CLDN2
HSPB1
TEX36
HUWE1
A4GALT
OVOL1
AP5B1
FGFBP2
CDH18
NBPF12
ZNRF2
SNX10
DOT1L
UBL4A
SLC10A3
SPTB
ENTPD8
SLC2A12
AP1B1
RTEL1
STMN3
SHCBP1L
PAX9
TDRD9
ATP5MPL
SERPINA6
NRP1
PTH1R
ROBO3
IL17RB
CHDH
PLXNB1
JPH2
BATF
HOXC6
HOXC5
MTRNR2L1
DCLK1
LPCAT1
DLC1
SBSPON
CBWD2
KLF10
SDC1
KLRF2
PSCA
JRK
NEFH
RCAN1
PLEKHF1
FYB2
HSFX4
EOLA2
NPIPB9
ZFP36L1
RGL3
WNT16
RMND5B
OBSL1
INHA
ESRP2
SLC37A3
RAB19
DNMBP
RABGEF1
EHD1
EPPK1
MYBPH
TSC22D3
TCF21
ARPIN-AP3S2
ARPIN
BCL3
RGS12
PPP2R5E
CPNE6
CARMIL3
WNT4
NUDT9
SLC25A19
TTLL6
PPL
HOMER2
NCAPH
ITPRIPL1
TP63
ADAMTS16
CLCN4
ADD3
TAX1BP1
PKM
SCD
CYB561
FNIP2
PTMA
DNMT3A
DDX47
ORAI2
TSEN54
CASKIN2
PRSS22
MED12L
USF2
MEF2A
CALML5
CHGA
SLC29A1
MYMX
PRMT8
TOB1
LARGE1
ZBTB46
PTPRN2
FBXW8
DNAJA4
CAND1
SLC16A3
RAB31
ELFN2
MIDN
NPIPA3
NPIPA2
PLA2G10
SH3BGR
LCA5L
ERN1
ZNF746
MT2A
NCOA3
MAPK13
CCDC149
RNF170
HOOK3
PRSS8
SLC11A2
PKIB
LHX4
UPK3A
PRSS23
ZBTB7A
ANXA2
UBE2I
RAI14
MOCS1
SBSN
GAPDHS
SYNGR1
TKTL2
ZNF823
CAPN13
BAIAP3
ZNF710
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
HKDC1
RXRA
CSK
TLE3
PALLD
PABPC1
SLC26A2
PDE6A
SEMA3B
ATXN1
SHC2
ABR
RBM43
PADI3
TJP3
GHRH
NUDC
NR0B2
ZNF436
TNK2
TGIF1
DDIT4
ARRB1
PGF
HTRA3
GPD1L
LENG1
BMP4
BASP1
SEC14L5
RPS28
NDUFA7
PTP4A2
SH3YL1
ACP1
TANGO2
ARVCF
PKD2L2
BHLHE40
ELF3
IMMP2L
MCIDAS
CCNO
CALHM4
DDX10
SASH3
PRSS56
SEC14L2
RNF215
UGT2B17
PPFIBP2
PDHX
APIP
PIEZO2
INAVA
ZNF703
TTC28
TUBA3E
ABCD3
MTUS1
HP1BP3
ATP5PO
GET4
FRAT2
CCDC170
VIT
RP1
KIFBP
S100A10
DGLUCY
TMEM220
SEMA3F
MTRNR2L6
TANC2
SPATC1L
MTRNR2L2
MSH3
DHFR
MTRNR2L8
KIF5C
COL23A1
SP2
KCNIP2
CCDC200
EAPP
ZBTB45
SLC27A5
RGPD2
RGPD1
METTL26
SPAAR
HRCT1
NFE2L1
MAMDC2
PHRF1
WDR90
WDR74
STX5
CRYAA2
CRYAA
APTX
POLR3F
DZANK1
TST
MPST
DNAJA1
EPN1
GTPBP6
MTRNR2L10
EMILIN2
USP17L21
USP17L20
USP17L12
DNM2
MTRNR2L9
ARHGEF16
USP17L22
LEMD2
TMEM242
RFX1
TAF12
ITGB5
CNOT3
NLK
PI4KB
HNRNPL
OSBP
LTBP1
DMPK
RNPEPL1
DUSP28
ANKMY1
C3
EXT2
EVI5L
NAIP
DEF6
NR2F6
MUC3A
FABP3
DLG4
ACADVL
OAZ3
MRPL9
NTMT1
FADD
ZMYND11
KRT13
TOM1L2
FOXO6
DRC3
H4C15
H4C14
H3C15
H3C14
HSP90AB1
OXT
C9orf50
PMEPA1
USP17L13
MTA1
SIN3B
RPL13
CIC
PDLIM2
GATAD2A
MAPKAPK5
USP17L11
POLDIP3
ZNF687
VWA1
TMEM88B
PABPN1
PARP16
SLC35E1
USP17L18
ASPG
TRMT10B
TRPM7
ZBTB7B
ATG16L2
ATP4A
SLC37A1
RABL6
CCDC183
FUT7
C9orf139
ABCA2
RGS19
OPRL1
LKAAEAR1
FARSB
PCIF1
IL1F10
FBH1
ANKRD16
CRK
ZNFX1
TMEM147
TMEM107
USP17L10
SIRT4
H2AC19
H2AC18
AMOTL2
CDH11
PMF1-BGLAP
PMF1
NDRG4
USP17L17
USP17L15
STC2
SETD2
SULT1A4
SULT1A3
LGR6
KIF2C
RASEF
SH3GLB2
MIGA2
EXOSC5
BCKDHA
FUS
SLC19A1
HID1
GLRX5
RBBP5
H4C12
H4C11
B2M
SPATA9
RHOBTB3
PDCD6IP
ATF4
NUP85
CIB2
ANKHD1-EIF4EBP3
ANKHD1
NPIPB6
ASS1
CPN2
PAX4
AFAP1
OPN4
FECH
MICAL3
SART3
ISCU
KHSRP
UNC5B
S100P
LSMEM2
H2BC5
H1-4
RPS29
GJD3
BTNL9
SH2D3C
LCMT1
PEX10
HASPIN
H4C9
TTC21B
GPR153
COL26A1
ANAPC7
SRSF7
ZNHIT2
TM7SF2
JUNB
C1orf198
HOGA1
C10orf62
ANGEL1
KRT36
KRT35
MEIS1
UFM1
MIEF1
MAB21L4
ITGB3
KLRC3
DLL3
TRAF7
RAB26
LAMB2
TMEM120A
TBC1D16
DYSF
ENKUR
AZGP1
ATP5MG
GOSR2
C19orf48
PNO1
MRPS7
MIF4GD
GGA3
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12F
GAGE12B
SPINK13
ZBTB5
SMAD3
ACBD6