ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9932067 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◢ SRX017710: CD4+ T cells

◢ SRX5090184: GM12878

◢ SRX10475642: Hep G2

◢ SRX10475643: Hep G2

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◢ SRX9932062: MCF-7

◢ SRX9932063: MCF-7

◢ SRX9932064: MCF-7

◢ SRX9932065: MCF-7

◢ SRX9932066: MCF-7

◣ SRX9932067: MCF-7

◢ SRX9932068: MCF-7

◢ SRX9932069: MCF-7

◢ SRX9932070: MCF-7

◢ SRX9932071: MCF-7

◢ SRX9932072: MCF-7

◢ SRX9932073: MCF-7

◢ SRX9932074: MCF-7

◢ SRX9932075: MCF-7

◢ SRX9932076: MCF-7

◢ SRX9932077: MCF-7

◢ SRX23330419: MDA-MB-231

◢ SRX23330420: MDA-MB-231

◢ SRX23330421: MDA-MB-231

◢ SRX23330422: MDA-MB-231

◢ SRX23330424: MDA-MB-231

◢ SRX23330425: MDA-MB-231

◢ HDAC6: STRING

GREB1
IGFBP4
TFF1
TMIGD3
ADORA3
CASP7
IL24
TMEM104
NAT9
MYOG
PDZK1
TSKU
IER3
FLOT1
HSPB8
FKBP4
RARA
SLC25A25
NAIF1
OSGIN1
PARD6B
STARD10
PRLH
FAM174B
NBPF4
ADAMTSL5
NBPF6
FREM2
PPP2R2C
FILIP1L
SBNO2
SPINK4
RNF223
RPS6KL1
SLC22A5
DCAKD
YIF1B
KCNK6
VASN
OVOL2
LMAN1L
CPLX3
GSG1L
CDC42EP1
LGALS2
TPD52L1
CYP1B1
CAP2
AMBP
ST8SIA6
SGK3
DGKZ
ATP6AP1
DNASE1L1
TMEM229B
CELSR2
SCOC
DUX4
CHPT1
SYT12
TTC39A
RAPGEFL1
TH
INS
SFXN2
ARL3
N4BP3
YBEY
MCM3AP
CDH1
MCF2L
UBE2T
RET
KRT37
CANT1
C1QTNF1
SLC25A24
PPARGC1A
NAV2
MLPH
CCDC88C
IL19
CTAG2
HAAO
AMZ1
BACE1
SLC9A3R1
PLEKHH1
CTBP1
FOXK1
ACOT6
NBPF1
TIPARP
KDM4B
C19orf33
NEMP1
NAB2
ZNF185
HEG1
PADI4
ATP8B1
PTPA
CRAT
SNX24
C1QTNF6
MYEOV
NHSL1
SLC7A5
B3GNT6
UMODL1
MANEAL
PAXX
CLIC3
ARPC1B
ESR1
STK11
ITPK1
TFAP2C
AKAP1
KRT8
MSMB
UPF1
XAB2
FASN
HAPLN2
USP31
MSLN
SRRM2
OTUD7B
RGS10
ATP5F1A
LY6E
DECR1
PGLYRP2
FBP1
MAMDC4
EDF1
SMTNL2
APOC3
APOA1
MAP3K14
CXXC5
PDGFA
SERPINF1
SEC14L6
MYB
NFKBIA
LAMC1
SYT8
FAM102A
FRG2C
LRRFIP2
CELA2A
MAD1L1
C1orf162
DOK7
MIDEAS
IPPK
ASB13
FST
FCGR2B
CELA2B
CALCR
CRKL
TMEM92
DHX37
BRI3BP
CTSD
VWA2
GRIK3
VPS26C
FOXK2
ALX4
SLC25A45
FRMD8
GPRIN1
PLIN5
LRG1
AGR3
SPTBN4
BLVRB
SPOP
CCR6
CCN5
DMRT2
CA12
AFF1
SLC25A36
GPR37L1
COLEC12
LYPD6B
EREG
ALDH3B1
ABAT
PRR5-ARHGAP8
PRR5
KIF21A
FMN1
ABCD4
CABLES2
LRRC56
HRAS
ADAM8
ACACB
TBX2
TTC6
FOXA1
ARMCX6
ARMCX3
KEAP1
MACC1
CST6
TIFA
EHF
DNPEP
FRG2
KRT19
ACSS1
LONP2
ABCC11
KRT85
TMED8
SAMD15
MANBAL
NFIB
ZFP36
PLEKHG2
MAPT
ARHGEF18
PKP3
ELF1
CHSY1
MICOS10-NBL1
MICOS10
PDE4C
SEPTIN9
UBALD1
MGRN1
RETREG1
SLC25A47
SEMA3B
ISYNA1
UHRF1
RERG
TUBA1A
PPP1R12B
ZNF79
CCDC198
GPC6
LONRF2
MRFAP1
OLFML3
COPS8
ANKH
EPS15L1
BDKRB1
SPATS2L
UNKL
LATS1
UGT2B15
IKBKG
G6PD
KIAA0319
RHOD
PDE4DIP
ASB2
KAT6B
SNAI1
CHST8
TMCC1
AGPS
GPSM1
ADORA1
LOC102724770
DGCR6
PSD4
ARAP3
TNS1
FAM187A
GFAP
PAK4
TCIRG1
NDUFS8
ARHGEF10L
PTGES
LIMS1
SERPINA1
YPEL2
CAPN12
PLCD3
ACBD4
VCAN
MIOS
KAZN
SLC26A1
IDUA
LIMS4
LIMS3
NMNAT1
LZIC
ART1
FADD
RCOR3
ST3GAL4
TSSC4
CBWD5
CBWD3
CBWD6
RAB40C
IER5L
SVIL
RTN1
SERPINA6
LRP5L
FGR
LOC100130520
CD300H
C17orf77
MTRNR2L1
KLK14
NXNL2
CDH26
INSYN1
SULT2B1
IRF2BPL
PXDC1
DSN1
UBL4A
SLC10A3
CFAP206
TMEM212
NPEPPS
SIAH2
TLE1
CTR9
SCGB3A1
ZBTB46
NRP1
EDN1
PCYT1A
ALG8
TNNI2
ZBTB37
TPD52L2
ABHD16B
GRM4
CUEDC1
ETNK2
B3GALNT1
TFAP2A
SLC25A42
ANKRD2
TTC9B
CCNP
RPL13
TRH
PERP
VEPH1
CERS2
ANXA9
NT5DC3
METTL26
WDR90
KLF16
CBFA2T3
SYNE3
RABGEF1
BOD1L2
MYZAP
GCOM1
NXT1
GZF1
PRDX1
BMP7
MFSD10
PLEC
SVEP1
EPB41L1
SLC9A3R2
PLEKHF1
CLASP2
NPIPB9
FUT4
NIPSNAP2
MEF2A
RNF144A
TMEM95
KCTD11
KLK13
B4GALT1
WWC1
DHRS3
BAIAP3
EBF4
RGL3
RBM43
CYP4F2
RPS6KA2
RIPPLY1
CLDN2
TRMT10B
SIDT2
CSAD
CALHM4
MAT1A
TDRD9
ATP5MPL
RTEL1
ARFGEF2
ATP13A3
SLC43A2
TJAP1
FRMD5
ATG16L2
SGCA
ADARB1
TBKBP1
RECQL4
MFSD3
LRRC14
PTPRR
UQCC2
MAGI3
IL20
GRAMD1A
ANXA2
IL2RB
ELOVL2
LOC102723996
ICOSLG
MAB21L4
PNKD
LRRC58
GOLM1
RNF170
HOOK3
SHC2
FAM3B
FGFBP2
EIF5AL1
SHANK2
HOMER2
HDAC11
NEFH
SPRY4
TBXA2R
ELAPOR1
C1orf194
SYNJ2
SUSD3
MRGPRG
ACIN1
FAM228B
TP53I3
SF3B6
TAX1BP1
DDX47
HSFX3
EOLA1
ATP6AP2
DNAJC5B
KCNIP2
TUBA3E
JPH2
ABR
SPINK13
SHCBP1L
SSTR2
TNFRSF6B
PRSS22
SYNPO2L
FSIP1
LPCAT1
SLC35E2A
TUBA3D
LFNG
PRDM4
ASCL4
MGAT3
ELFN2
NAIP
SCUBE2
CDK3
CCNL1
SLC25A1
COMTD1
RGS3
WNT16
RGS12
MAPKAPK3
CISH
GDF15
SLC25A19
OBSL1
INHA
TBX1
ABHD2
NR2F2
STMN3
SPTB
HK1
CYP4F11
FOXN1
DOT1L
DNAJA4
TXNRD1
ZFYVE28
CFAP99
EHD1
SCARB1
ORAI2
KLK12
WDR74
STX5
ADGRG1
PTP4A2
KRT13
P2RY2
ADCY5
SPATC1L
MTRNR2L2
MSH3
DHFR
MTRNR2L8
RPS28
NDUFA7
KIF5C
COL23A1
EFHD2
SP2
PTPRN2
ZNF346
FAM214A
CCDC200
EAPP
PRUNE1
MINDY1
ZBTB45
SLC27A5
ARID5B
RGPD2
RGPD1
SURF4
GZMM
CDC34
CASTOR1
NDRG1
AKNA
CBWD2
SPAAR
HRCT1
PLXNB1
PRSS27
NFE2L1
TMEM210
LRRC26
MAMDC2
PHRF1
REM2
COX7A2L
CRYAA2
CRYAA
APTX
POLR3F
DZANK1
C20orf203
SDC4
TST
MPST
DNAJA1
SLC1A5
EPN1
GTPBP6
MTRNR2L10
EMILIN2
TTC39C
CPA6
FIGNL2
DNMT3A
USP17L21
USP17L20
USP17L12
DNM2
MTRNR2L9
PTH1R
ARHGEF16
PLCB1
USP17L22
MYLK2
CCR7
LEMD2
ROBO3
FBXW8
ERN1
TMEM242
CDR2L
HSPA4
RFX1
USF2
TAF12
ITGB5
GINS3
CLCN4
ZNF710
TSEN54
CASKIN2
MFSD6
SLC45A4
AP1B1
DHRS2
CNOT3
CDH18
SLC37A3
RAB19
NLK
DDX10
CDC42EP3
PI4KB
HNRNPL
BAMBI
ACOX3
TSPEAR
KRTAP10-12
CCDC9B
ATXN1
RCAN1
OSBP
LTBP1
DMPK
RNPEPL1
DUSP28
ANKMY1
C3
MAPK13
MTRNR2L6
MIDN
JUP
TTLL6
EXT2
MARCHF10
RHOBTB1
TBC1D14
CALML5
NT5C2
EVI5L
APOA4
DEF6
SLC29A1
MYMX
NR2F6
MUC3A
SDC1
PABPC1
ZBTB7A
GPRC5A
FABP3
FAM184A
IMMP2L
ATG9B
ABCB8
DLG4
ACADVL
OAZ3
MRPL9
RALGPS2
UBE2H
HKDC1
NTMT1
DLC1
ME3
ZMYND11
PPL
TPTEP2-CSNK1E
BCL3
TOM1L2
FOXO6
DRC3
SNX10
H4C15
H4C14
H3C15
H3C14
HSPB1
HSP90AB1
OXT
RMND5B
C9orf50
PMEPA1
SLC6A6
USP17L13
MTA1
SIN3B
FNIP2
KLRF2
NCAPH
ITPRIPL1
CIC
ZNF746
PDLIM2
GATAD2A
MAPKAPK5
ITGB2
USP17L11
POLDIP3
ZNF687
VWA1
TMEM88B
ZNF552
TWF2
PPM1M
KCNH7
PPP2R5E
PABPN1
PARP16
TSPAN5
SLC35E1
USP17L18
FAM234B
ASPG
JARID2
TRPM7
ZBTB7B
CST9
ATP4A
ZNF385B
SLC37A1
RABL6
CCDC183
FUT7
C9orf139
ABCA2
RGS19
OPRL1
LKAAEAR1
ABCD3
PTMA
NBPF12
FARSB
PCIF1
IL1F10
PAX9
TP63
FBH1
ANKRD16
TPBG
CRK
ZNFX1
TMEM147
ZSWIM6
MERTK
ARHGAP29
TMEM107
USP17L10
SIRT4
CAND1
H2AC19
H2AC18
AMOTL2
CDH11
PMF1-BGLAP
PMF1
ZNRF2
TEX36
BHLHE40
NPIPA3
NPIPA2
NDRG4
ENTPD8
USP17L17
USP17L15
STC2
SETD2
SULT1A4
SULT1A3
LGR6
PALLD
LENG1
KIF2C
PAQR5
PLA2G10
PGF
B3GNT3
ABCA3
HUWE1
RASEF
SH3GLB2
MIGA2
PADI3
EXOSC5
BCKDHA
MTUS1
LARGE1
FUS
FYB2
EPPK1
TNK2
UBE2I
RAI14
SLC19A1
HID1
GLRX5
SLC2A12
RBBP5
A4GALT
H4C12
H4C11
B2M
SPATA9
RHOBTB3
PDCD6IP
ATF4
TJP3
NUP85
CIB2
ANKHD1-EIF4EBP3
ANKHD1
TKTL2
ZMYND8
NPIPB6
ASS1
CPN2
PAX4
KLF10
DNMBP
ETV4
SH3YL1
ACP1
AFAP1
OPN4
FECH
MICAL3
CPNE6
CARMIL3
SART3
ISCU
KHSRP
UNC5B
S100P
LSMEM2
MYBPH
H2BC5
H1-4
BATF
RPS29
GJD3
PRSS23
BTNL9
PKIB
SH2D3C
LCMT1
PEX10
HASPIN
ADD3
H4C9
TTC21B
GPR153
COL26A1
ANAPC7
SRSF7
ENHO
CYB561
ESRP2
SLC16A3
ZNHIT2
TM7SF2
LHX4
JUNB
C1orf198
HOGA1
C10orf62
ANGEL1
KRT36
KRT35
MEIS1
TTC28
UFM1
TCF21
CACNA1H
INAVA
MIEF1
RXRA
ITGB3
KLRC3
DLL3
TRAF7
SASH3
RAB26
MED12L
LAMB2
GPD1L
TMEM120A
ARPIN-AP3S2
ARPIN
TBC1D16
DYSF
MOCS1
HSFX4
EOLA2
ENKUR
SEC14L5
HOXC6
HOXC5
ADAMTS16
AZGP1
ATP5MG
SH3BGR
LCA5L
GOSR2
C19orf48
TGIF1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
PNO1
MRPS7
MIF4GD
GGA3
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12F
GAGE12B
ZBTB5
SMAD3
ACBD6
CD22
NVL
GTF2B
HRK
NCOA3
ZNF576
IRGQ
IMPA2
FBN1
CSK
ZRANB2
ZNF335
SF3B3
COG4
RAB5B
PMEL
CDK2
ADCY9
GRPEL1
EEF1A1
MYH11
H2BC15
H2AC15
TSN
RAB31
UBE2L3
TRIM2
H2BC14
H2AC14
KCNK7
PSMD12
PCNX3
MAP3K11
RPEL1
NUP93
AHCYL1
TOMM40
RAD23A
CALR
BMP4
ZBTB42
AKT1
ZFP37
PRSS8
PHF13
KLHL21
ZNF91
GAA
PKM
H4C3
H1-6
DDIT4
UPK3A
SBSPON
SEMA4G
ID1
DCLK1
CASZ1
ZNF654
EFTUD2
CGGBP1
CCDC103
INTS9
HMBOX1
RPS27
RAB13
NNAT
EIF3E