ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: DRX028800 | Embryonic gonad
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◣ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX15046886: MEF

◢ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◢ SRX15441805: Unclassified

◢ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

Tcstv3
Brox
Aida
E030030I06Rik
Wdr77
Atp5pb
Cldn34d
Ptcd3
Polr1a
Rpl19
Cacnb1
Calm3
Med1
Cdk12
Ift27
Pknox1
Qrich1
Qars
Pik3r3
Phrf1
Arid4a
Arntl
Txndc11
Sharpin
Maf1
Cyc1
Gm35339
Pfdn4
Septin11
Tcp11l2
Tada3
Arpc4
Fus
Lrpprc
Cmc2
Cenpn
Cdiptos
Cdipt
Trir
Get3
Prkdc
Mcm4
Gipc1
Uchl3
Mat2a
Top2a
Dgat2
Taf15
Mmp28
Shc1
Flad1
Cks1b
Lenep
Denr
BC005537
Tigd5
Eef1d
Inip
Cenpe
Uqcrh
Lrrc41
Hyal2
Hyal1
Tusc2
Nfib
Taf6
Mblac1
Cnpy4
Dcun1d4
Caskin1
Pgp
Mlst8
Bricd5
Dolpp1
Dut
1700029I15Rik
Mapk8ip1
Psmd5
Cutal
Eif3b
Ptcd2
Mrps27
Olfml2a
Nr6a1
Dnm2
Cnot6
Por
Gpr157
Camta1
Rita1
Ddx54
Hexim1
Ubald1
Mgrn1
Srf
Cul9
Fzr1
Dohh
Smim24
Gm48552
Tepsin
Ndufaf8
Ap3m2
Mfsd13b
Cdr2
Prkci
Slc39a3
Oga
Wdr27
1600012H06Rik
Gnb2
Tctn2
Zswim4
Aldh4a1
Arrdc4
Tmem218
Mrps11
Mrpl46
Jun
Ppm1l
Lsg1
Atg101
Smim41
Tmem129
Tacc3
Slbp
Tbc1d17
Pnkp
Akt1s1
Nphp4
Kcnab2
Cnot1
Sp2
Mia2
Dpp9
Dnmt1
Sash1
Styxl1
Mdh2
Fbxw4
Tom1
Uros
Bccip
Rhbdd3
Ewsr1
Ube2d3
Fam227a
Cby1
Smim10l1
Rpgrip1
Hnrnpc
Cln8
Hs3st3a1
Il22ra2
Abhd2
Eif2ak3
Tnnc2
Ube2c
Tmem260
Baz2a
Atp5b
Slc26a8
Mapk14
Eed
Asah1
Ptdss1
Mterf3
Wasf1
Cdc40
Ankrd54
Zfp113
Atrnl1
Rmnd5a
Noct
Zfp383
Zfp27
Rbm39
Uhrf2
Olfr311
Gm12258
Trip10
Gpr108
Traf2
Prkaca
Arap1
Trpm4
Hrc
Ttll7
Psip1
Ankhd1
Pkia
Oxr1
Tmem102
Fgf11
Chrnb1
Elavl2
Eif4a3
Card14
Rpl22
Rnf207
Fam53c
Cdc25c
Ttc41
Hsp90b1
Fam76a
Ndufb1
Cpsf2
Ptov1
Tst
Mpst
Rnf5
Agpat1
Nucb2
Selenop
Samd4b
Gmfg
Cep135
Ncoa2
Trappc3
Map7d1
Naa35
Slc25a4
Hydin
Smc3
Nudt2
Kif24
Frat1
Axl
Rtn3
Nectin3
Ankfy1
Mvk
Mmab
Tmem145
Prr19
Pafah1b3
Fbxo33
Rps6ka5
C1d
Selenow
Ddx19b
Aars
Rtkn
Wbp1
Ino80b
Bcl6
Ubl5
Pin1
Fbxl12
Nsun3
Siah1b
Rlbp1
Fanci
Fbxo24
Lrch4
Rps7
Tspyl1
Glrx5
Pias2
Tmem198b
Dnajc14
Hdac2
Kmt5c
Ccdc85c
Raly
Tmbim6
Tcerg1
Per2
Kctd2
Atp5h
Paip2b
Zfp366
Srbd1
Usp1
Pawr
Crebzf
Rpl12
Lrsam1
Robo1
Zfp341
Pxmp4
Srek1ip1
Cwc27
Hspa4
Polg
Tnrc6b
Pan2
Il23a
Nol6
Med30
Cd164
Wnt3
Srpk2
Zbtb40
Rab28
Rab5b
Pmel
Cdk2
Timm17b
Pqbp1
Fchsd2
Dnajb4
Fubp1
Cep41
Atf7
Spata25
Ctsa
Zswim1
Sel1l
Mtmr14
Gm5165
Atp8a1
Slc25a41
Khsrp
Eif5
Was
Madd
Nol8
Cenpp
Cic
Mthfd2
Mob1a
Ift22
Sufu
Actr1a
Sos2
Cacna1h
Rnpc3
Oscp1
Map4k4
Fam204a
2310022A10Rik
Pld3
Timeless
Mip
Stip1
Tmem209
Ssmem1
Rassf7
Lmntd2
Utp18
Mbtd1
Ttf1
Cfap77
Dync1h1
Pip4k2b
Calcoco1
2610008E11Rik
Kat6b
Fdft1
Kansl2
Rpp38
Acbd7
Clnk
Zfp687
Iqch
Aagab
Lamp1
Add1
Sipa1l1
Canx
Sarnp
Ormdl2
Gas7
Sec23ip
Mcmbp
Isoc2b
P2ry2
Hdac1
Spsb3
Nubp2
Nme3
Mrps34
Igfals
Eme2
Gripap1
Slc2a5
Bmp8b
Nudt1
Ly6g6f
Abhd16a
Ska2
Prr11
Mis12
Derl2
Kdm4b
Wrap53
Trp53
Zfp691
Pycr2
Myl12a
Srgap2
Fam72a
Mphosph8
Micos10
Cct5
Atpsckmt
Psmb2
Ephb2
Mucl3
Sh3glb2
Miga2
Dalrd3
Wdr6
Paxip1
Enpep
Tle2
Prpf40a
Arl6ip6
Rraga
Uba1
Immp1l
Elp4
Rlim
Uqcrq
Leap2
Gdf9
Supt5
Scamp5
Spag8
Hint2
Gm20346
Anp32a
Zfp574
Grik5
Meis1
Zbtb17
Srarp
Stxbp4
Cox11
Hnrnpr
Wdr45
Edrf1
Mbp
Maco1
Tjp3
Pip5k1c
Galnt10
Uchl1
Uhrf1bp1
Rbm15
Mogs
Acat2
Git2
Ankrd13a
Zfyve21
Xrcc3
Bub1
Idh3b
Ptch1
Pold4
Tmprss3
Gm7244
Prdm10
Ttbk2
Frem3
Smarcal1
Dcaf11
Ss18
Nudcd2
Hmmr
Flcn
Recql
Golt1b
Nr5a1
Ccl28
Rpusd3
Rbm27
Relch
Pign
Cemip
Tbccd1
Dnajb11
Rps19
Rnf44
Cdhr2
Palb2
Dctn5
Zbtb5
Polr1e
Kdm2b
Xrcc1
Pinlyp
Ensa
Tmem88
Naa38
Cyb5d1
Zfand3
Zfp143
Aacs
Hbp1
Junb
Hook2
Katnb1
Kdm4a
G3bp1
Atox1
Slc34a3
Fam166a
Tubb4b
Fam222a
Dcaf7
Sp1
Narf
Cybc1
Rcl1
Zfp869
Orai3
Rpn2
Mroh8
Glce
Ap2a1
Ppp6r3
Rfx1
Psmb3
Pcgf2
Cfap73
Setd1a
Ppm1b
Kctd9
Cdca2
Dcps
Gatad2a
Dbp
Car11
Sec1
Ubald2
Rps6ka2
Osbp
Evi5l
Rab11b
Sult6b2
Greb1
Nkx2-6
Kpna1
Tmem125
T2
Kmt2a
Rab11fip4
Il31ra
Wwox
Hexb
Cerk
Jag2
Sspn
Asmt
Gnai2
Akirin1
Atg12
Ap3s1
Myh14
Cenpu
Prox2
Olfr806
Bhlhe40
Abhd6
Ndst2
Cd209a
Eapp
Frmd4a
Irf2bp2
Tex14
Wasl
Col16a1
Zbtb4
Slc35g3
Polr2a
Cbr3
Sec14l1
Slc14a2
2900026A02Rik
Sod2
Ube2b
Cdkl3
Aldh9a1
H2-DMa
Brd2
Rps29
Lrr1
Olfr855
Olfr854
Itgb4
Dlst
Oasl1
Mtf2
Srxn1
Cul2
Diaph1
Zfp949
Vmn2r102
Cltc
Bzw1
Tspan4
Polr2l
Cd151
Ccser2
Fam20b
Ajuba
Fgd4
Dot1l
Rps27l
Dhrs3
Ppp1r13l
Cd3eap
Cdhr4
Xpc
Lsm3
Phlda3
Zfp219
Tmem253
Pa2g4
Mylip
Smg9
Hexim2
Trappc9
Slc35e2
Lrrc56
Hras
Rbm25
Proser1
Nhlrc3
Ttc39d
Srsf7
Mfsd8
Hjurp
A730008H23Rik
Tmem41b
Nemf
Stat1
Fbxl14
Znhit1
Plod3
Akt2
Cdca7l
Ttll10
Dab2ip
Ap2m1
Ubr4
Mtss2
Zfp469
Hmox2
Calml3
Inka1
Rnasek
0610010K14Rik
Etv5
Atp6v0c
Amdhd2
Taf12
Gmeb1
Bzw2
Ankmy2
Mmp15
Kremen1
H3c15
H3c14
H2ac19
H2ac18
Fam227b
Dtwd1
Tmem250-ps
Cdt1
Aprt
Igsf8
Rusc2
Tecpr1
Arhgef1
Amotl2
Rab33b
Slc1a1
Tjp2
Unk
H3f3b
Gstm5
Uba7
Abhd18
1700034I23Rik
Frat2
Snap47
Jmjd4
Dnajc16
Casp9
Tbck
Aimp1
Ss18l2
Ahnak
Nmral1
Susd6
Pole3
Gm3448
Gm3417
Alad
4933430I17Rik
Yif1b
Tle3
Kcnk6
Stat3
Niban2
Id1
Sfi1
Htra2
Ctnnb1
Reep4
Hr
Dst
Atp1a2
Bcl9l
Sigmar1
Nme1
Crybg1
Limch1
Nktr
Zfp821
Get4
Bsdc1
Ier5l
Slc35b1
Sec22c
Cct8
Atp5g1
Tarbp1
Arl2
Gtf2a1
Uvssa
Actr3
Rsph3b
Lmnb2
Wdr92
Pno1
Atg16l2
Fstl3
Tcte3
Utp3
Gfpt1
Slc30a5
Chmp7
Zxdc
Cox8c
Acacb
Get1
Oacyl
Ints10
Mrpl21
Ighmbp2
Eef2
Cfap20
Frmd6
Ier2
Rbbp6
Arl4d
Dqx1
Them6
Slurp1
Psca
Dgat1
Tgfbi
Txnip
Bbs2
Nt5c3
Utp14b
Osbpl1a
Acsl3
Lfng
Sema3b
Col6a3
9030025P20Rik
Rpl27
Ifi35
Ubd
Ilf2
1700016H13Rik
Hmgcs1
Ints4
Tbc1d31
Fkbp3
Fancm
Ermard
Nuf2
Mapkapk5
Poldip3
Sorbs1
Mical3
Isy1
Cspp1
Cops5
Smim17
Erp27
Taf9
Rad17
Myadm
Ak6
Angptl4
Spty2d1
Myo10
Chordc1
Cd79a
Mtch2
Tob1
Arhgap19
Dok3
Ddx41
Birc2
Magi1
Gramd1b
Tpt1
Mrpl30
Mitd1
Scrt1
Wdfy2
Plekha1
Limk2
Eif4enif1
Tmem167b
Gzmm
Plekhb1
Serpina3n
Rarg
Oprd1
Trib1
Opa1
Fnbp1
Gfra4
Cyth1
Tmem107
Nfe2l1
Fxyd3
Nfatc2ip
Sncg
Mmrn2
Gm3435
Wnt10a
Smim38
Zscan25
Sirt4
Setd4
Cbr1
Clic4
Hes6
Fam149b
Ecd
Cnot3
Tcf3
Ttc14
Gpr84
Rps28
Ndufa7
Prxl2b
Zfp607b
Rgs3
Cdkn2c
Frmd4b
Pop7
Faf1
Nepn
Gopc
Esyt2
Nt5c2
Prdx2
Kpnb1
Med6
Zfp24
Tomm40
Snrpc
Kifap3
Phlda1
Smim4
Nt5dc2
Nabp1
Armc1
Psmd3
Fau
Msmo1
Slc18b1
Rps12
H4c3
H1f6
Vasp
Tsga10
Ppm1n
Lipt1
Dffb
Cep104
Ccdc124
Usp20
BC005624
Syngr1
Sema3f
Rpl3
Zfpl1
Vps51
Tmem262
Cdca5
Fem1b
Pias4
Sec23b
Rbbp9
Calm1
Aadacl2fm1
Mark3
Tfap2a
Gtf2f1
Rab4b
Mia
Trim7
Stk32c
Rnf125
Hipk2
Aard
Slc39a4
Emsy
Tbxa2r
Cactin
Plekha7
Trim41
Egr2
Rbm5
Nup107
Klhl21
Mideas
Actn4
Ttll5
Rer1
Morn1
Erg28
Tfg
Ccnt2
Kctd14
Kansl3
Fer1l5
Cipc
Jund
Iqcn
AW549877
Marchf3
Rps3a1
Nfat5
Zcchc14
Crtc1
Zfp526
Dedd2
Arhgap11a
Espn
Zc3h18
Eps15
Nup133
Il34
Srm
Aig1
Fitm2
Fam174c
Nacc2
Map3k7
Tm7sf2
Pde3a
Kif2c
Zfp654
Cggbp1
Ngdn
Grin2c
Fdxr
Mdfi
Ulk1
Dapk3
Fbxw7
Fosb
Vta1
Slc25a25
Cirbp
Spink5
Spdye4b
Rbak
Gpn3
Fam216a
Pip4p1
Osgep
Apex1
Ist1
Evpl
Grb2
Extl1
Prss57
Rhbdl3
Col6a6
Smg1
Bmf
Map2k7
Rel
Cebpa
Kpna3
Smoc2
Tsc22d1
Birc5
Med23
Lig4
Cks2
Abhd13
Sde2
Sgms1
Ifna13
Gm51425