ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX15046887 | MEF
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX15046886: MEF

◣ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◢ SRX15441805: Unclassified

◢ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

Txndc11
Rnf44
Cdhr2
Tcstv3
Oprd1
Aard
Cldn34d
Galnt9
Vasp
Ppm1n
Rtn2
Dab1
Plekha7
Gm3739
Mmp15
Pde3a
Vtn
Sarm1
Arrdc4
Adamts19
Wnt10a
Ccdc85c
Galr3
Ccdc3
Cnnm3
Plvap
Dpysl4
Mad2l2
Draxin
Adcyap1r1
Ubd
Olfr94
Yif1b
Kcnk6
P2ry1
Reln
Ampd3
Igfbpl1
Reep4
Hr
Lrrn4
Lrrc3b
Gm2237
Cnnm1
Bmp7
Ptf1a
Btbd11
Sema3f
Ret
Rftn1
Sall4
St6galnac2
Htra4
Cabp7
Prkcz
Ier5l
Synm
Gm5165
Jph3
Pm20d2
Nt5c2
Ina
C2cd4b
Prkcq
Mroh5
Gm6569
Bmp2
Srm
Kcnb2
Kcns2
Dock8
H3c15
H3c14
H2ac19
H2ac18
Tmem179
Ffar4
Adcy8
Fnbp1
Gcnt1
Efcc1
1810020O05Rik
Egr2
Ado
Garem2
3110082J24Rik
Ephb1
Homer2
Fam189a1
Gm3752
Prtg
Adcy9
Paip2b
Gda
Rapgef5
Trarg1
Bhlha9
Tjp3
Pip5k1c
Tpcn1
Iqcd
Ascl2
Pakap
Tcea2
Sox18
Plxnd1
Phpt1
Mamdc4
Ajm1
Kctd1
Ppp2r5a
Gjd3
Vps13c
C2cd4a
Gxylt2
Tpbgl
Kcnk12
Dact2
Tarbp1
Fdft1
Emb
Gm3488
Gatad2a
Col27a1
Fgfbp3
Btaf1
Ntsr2
Unc5a
Sptbn4
Syt10
Ak5
Celsr1
Dusp2
Astl
Igfbp5
Oxr1
Nefl
Gm5796
Tbx20
Pax4
Kmt2a
Gja3
N4bp2l1
Adrb3
Plag1
Zfp143
Tmem200c
Ptger3
Kbtbd13
Rasl12
Calm3
Adcy1
Insyn1
Gfra4
Gpr84
Tppp
Nae1
Car7
Gabra5
St6gal2
Dolpp1
Cdh4
A830018L16Rik
Pygo1
Wnt3a
Sema5b
Stum
Lrrc75b
Ggt1
Tmem132b
Brox
Aida
Usp13
Reep1
Scn1b
Igdcc3
Gm3411
Slc35f3
Car15
Gipc1
Prkaca
Fzd10
Rasef
Ankrd54
Erich1
Dlgap2
Lysmd2
Osbp
S1pr5
Keap1
Lrrn2
Sorcs1
Rhbdl3
Adamts15
Eya2
Zbtb16
Slit3
Wnt3
Rerg
Trappc6a
Bloc1s3
Dynlt1b
Col19a1
Kif7
Ap1b1
Nefh
Abhd2
Olfm1
Prima1
Adcy3
Gpr27
Sp1
Jpt2
Zfp869
1700001C19Rik
Pitpnm1
Cdk2ap2
Snx20
Guca1a
Wnt7a
Fgfr1
Tmem178
Gm3636
Grin3b
Tnrc6b
Enox1
B3gnt7
Pcdh1
Atp1b1
Pax3
Slc22a3
Gbx2
Irx4
Gng13
Chtf18
Rpusd1
Mixl1
Gimap1
Gimap5
Fam53c
Cdc25c
Shisa2
Grid1
Svep1
Vax1
Prdm13
Shc2
Odf3l2
Abtb2
Rnf165
Pax6
Sharpin
Maf1
Cyc1
Gm35339
2810459M11Rik
Galnt10
Trnp1
Gm3667
Kcnq3
Slc24a2
Cby3
Pdzrn3
Ankrd34b
Kcnq4
Gldn
Zbtb7c
Gm3500
Adarb1
Rrbp1
Kcnj12
Atp8b1
Nmbr
Arid4a
Ednrb
Dlgap4
Zfp593
Gm30191
Grrp1
Kcna7
Atoh8
Klf11
Aph1c
Ntf5
Fbrsl1
Hhipl1
Susd1
Ttc9
Dlk1
Ky
Pcbp3
Kcnip3
Shisa9
Gm10406
Lingo2
Nptxr
Mapt
G3bp1
Atox1
Cnot3
Shisa8
Nkx1-2
C130074G19Rik
Zfyve28
Cfap99
H1f10
Cul2
Slc6a17
Prkg2
Rab11fip4
Rab11b
Nkd2
Ptprt
Ush1g
Otop2
Wnt4
Tmem158
Pmp22
Ebf4
Ppic
Cdh23
Lama1
Kcnq2
Mxd4
Foxi3
Astn2
Tmem30b
Npc2
Isca2
Xpc
Lsm3
Nrxn2
Hs3st4
Spsb4
Rasgrf2
Foxs1
Lonrf2
Dusp15
Syt12
Plekho2
Pif1
Gsg1l
Onecut3
Lurap1l
Tfdp1
Crhr2
Gm38538
Rnf144b
Dmrt2
Asap1
Cftr
Insyn2a
Shh
St8sia1
Galnt16
Lmo1
Colgalt2
Lypd6
Tldc2
Soga1
Fam43b
Cnr1
Mafa
Unc5b
Slc22a23
Hmgcs1
Neurod2
Cdca7l
Ap3m2
Foxe3
Fam163b
Kit
Skor1
Kpnb1
Mxd1
Nt5e
Zfp960
P2rx5
Bhlhe23
Trpm4
Hrc
Ubald2
Dipk1c
Ube2ql1
Rgs9bp
Ankrd27
Psd
Pdxp
Tepsin
Ndufaf8
Ap2a1
Fam83d
Rims4
Ngdn
Gas1
Ssu72
Kcnma1
Fndc10
Vps26b
Ncapd3
Hmx1
Ube2b
Cdkl3
Gse1
Olig1
Atp1a3
Pdzrn4
Spint1
Ppp1r14d
Fcgr3
Gjc2
Ccdc177
Frmd4b
Ripply2
Cyb5r4
Dgka
Pym1
Cmc2
Cenpn
Adamts2
Fbn2
Fam78b
Zfp879
Grm6
Col23a1
1110032F04Rik
Tgfa
B3gat1
Sertm1
Zfp654
Cggbp1
Egr3
Clip4
Man1c1
Gm3383
Fzd2
Rbp4
Pde6c
Spns2
Efnb2
Col15a1
Rpn2
Mroh8
Camk2b
Dock10
Ebf1
Plekhd1
Wnk2
Map3k5
Wscd1
Tmie
Als2cl
Sstr1
Klhl40
Stox1
Adgrb1
Galnt13
Tmem210
Lrrc26
Kank4
Maneal
Mme
Mvk
Mmab
Gm51425
Tdrkh
Myh10
Chst3
Islr2
Cbln4
Wnt11
Rnf125
Pdik1l
Foxb1
Crhr1
Sp2
Ngf
Vangl1
Ppm1b
Lrrfip1
Jakmip1
Mex3c
Pkp1
Qrfprl
Lrrc10b
Cpm
Abhd17a
Flt3
Tnnc2
Ube2c
Vamp2
Per1
Slc24a4
Ensa
Qrfpr
Wiz
Rasal3
En2
Atp10a
Nav2
Sstr2
Lhx3
Drd5
Slc30a10
Kmt5a
Rassf10
B4galt6
Cyp46a1
Kcns1
Chd5
Dcaf11
Recql
Golt1b
Lingo1
Rbx1
Ptbp1
Sap130
Kcna6
Apba2
Ss18
Stac2
Ankhd1
Clec2l
Zmiz1
Ctnnbip1
Wnt2
Ttc41
Hsp90b1
Mslnl
Glrx5
Dtna
Slc43a1
Stip1
Aplp2
Sdk2
Cck
1700067K01Rik
Misp3
Palm3
Pou3f1
Irx2
Ptpn14
Slc16a14
Gpr25
Dgcr8
Pcsk5
Tle4
Wnt5b
Rcor2
Cnpy1
Tmem121
Flt4
Tmem215
Ppm1l
Adamtsl3
Nsg1
Samd4b
Gmfg
Sun1
Vav3
Gpr88
Zfat
Pdlim1
Tbx21
Ksr2
Megf11
Gdf7
Shisal1
Otp
Cd83
Srpr
Foxred1
Pde1b
Mtch1
Map6d1
Fbxo41
Egr4
Cyth1
Nudt17
Twist2
Tcf19
Pou5f1
Cchcr1
Isl1
Nrp1
Srgap2
Fam72a
Insig1
Gdpgp1
Cib1
Endod1
Col13a1
Eef2
Kmt5c
Pias4
Mto1
Cgas
Adrb1
Rnf144a
Pced1b
Amigo2
Ppp2r2c
Acot3
Mpv17l
Tle1
Pigq
Nhlrc4
Popdc3
A930017K11Rik
Htr1b
Fgf3
Rab40c
Kctd12
Stk32c
Slc39a4
Cpsf1
Cebpd
Wnt1
Dach1
Lsamp
Ska2
Prr11
Sp4
Fam20b
Nudt2
Kif24
1190005I06Rik
P4hb
Arhgdia
Dsg2
Tbl1xr1
Sqle
Eva1a
Cpne5
E030030I06Rik
Rnf7
Itga4
Kcnq1
Clmp
Abcc8
Marchf11
Kcnh1
Tafa5
Acot1
Nr2e1
Rab5b
Pmel
Cdk2
Bsdc1
Colgalt1
Greb1l
C1ql1
Gnal
Tom1l2
Drc3
Cacnb2
Prmt8
Cnot1
Gramd1b
Prex2
Npnt
Helt
Rgs7bp
Gdf10
Trappc9
Grk6
Plxnc1
Nlgn1
Atp5g1
Megf6
Calhm6
Olfr1394
Fem1a
Dock9
Aktip
Atrnl1
Kif2c
Klf10
Bmper
Kndc1
Ift140
Cramp1l
Hsd11b2
Trim62
Fam163a
Sfxn2
Arl3
Cep192
Mfsd13a
Ptpdc1
Prdm6
C2cd2
Zfp800
Gm45623
Tm6sf1
Nalcn
Fam76a
Dnpep
Epb41l3
Syngap1
Phf1
Cuta
Smtnl2
Ube2d1
Htr1d
Ggct
Tesk2
Sigmar1
Wasf2
Arid3c
Dctn3
Rnpepl1
Dusp28
Ankmy1
Aldh1a3
Pde8b
Ryr3
Tom1
Dhh
Sost
Baz2a
Atp5b
Nfatc1
Ttbk2
Nipal2
Tnfrsf21
Ctnnd2
H60b
Vgll2
Tomm40
Prtn3
Plppr3
Cntn5
Ntn1
Zfp385b
Trim47
Polr3h
Lpar3
Cacna2d2
Rax
Dll1
Nppc
Hdac2
Snrpd2
Qpctl
Mmd
Hmox2
Nmral1
Kdm4b
Prph
Hcn4
Tmem129
Tacc3
Slbp
Xylt1
Olig2
Mrtfa
Dok7
Acvr2b
Kank1
Efcab1
St8sia2
Gpr135
Zswim4
Dlx5
Mis12
Derl2
Gsc2
Ess2
Tmem60
Phtf2
Slc2a13
Cyp26a1
Cyp26c1
Hnrnpl
Zfp853
Nabp1
Dlc1
Esyt3
Gpam
Insm2
Grm5
Rpl22
Rnf207
Pim1
Gm3696
Hmcn2
Asic2
Dnajb1
Mtmr4
Nol4l
Six3
Slc4a11
Tpmt
Kdm1b
Msc
Sfrp5
Adra2c
Wdr25
Wars
Panx1
Camta1
Mpzl1
Sptbn2
Hs3st3b1
Srek1ip1
Cwc27
Zfyve21
Xrcc3
Snrpd1
Esco1
Pla2g6
Ebag9
Has2
Ugt8a
Dync1h1
Traf2
Fbxo24
Lrch4
Lrif1
Ankrd50
Deptor
Slc26a4
Tbc1d30
Fbln7
Npas1
Kcnk15
Acot5
Zxdc
Grin2c
Fdxr
Rab8a
Adamts9
Add2
Sgk3
Cep131
Susd5
Foxf1
Kcnn2
Nacc2
Spry1
Nkpd1
Gm5784
Efhd1
Gm10499
Hspa1b
Hdac9
Cecr2
Sh2b2
Arhgef7
Vegfa
Tril
Rai1
Man2a1
Npas2
Nrg2
Kcnc1
Bcl6
Tob1
Tedc1
Crip1
Amz2
Gsr
Shroom3
Eya1
Igfbp2
Dop1b
Gnaz
Ghsr
Clic4
Ascl4
Sertad2
Adamts20
Dpf3
Caskin1
Pgp
Mlst8
Bricd5
AW549877
Sh3bp5
Foxk2
Dgkg
Atoh7
Olig3
Mrpl21
Ighmbp2
Map3k3
Chadl
Cic
Slc25a42
Myh9
Actn1
Dact1
Klhl35
Dynlt1a
Lingo3
Gm20346
Anp32a
Ephx4
Grik1
Irf4
3110082I17Rik
Kcnk9
Ryr2
Baiap2
Hmgn1
Camsap3
Cdkn3
Kl
Igsf21
Prrt4
Smim43
Ptov1
Arpp21
Cyp2u1
Paqr9
Sv2c
Gm7244
Prdm10
Rpgrip1
Hnrnpc
Dffb
Cep104
Trim45
Bcl10
Tspear
Tcf15
Adam22
Tsga10
Lipt1
Rpl29
Acy1
Cyld
Chn2
Mei1
Abhd14a
Sdf2l1
2610318N02Rik
Arhgap33
Fjx1
Notum
Myrip
Arhgap6
Gins2
Cdk5rap3
Plxna2
Slc1a2
D430041D05Rik
Artn
Nkx2-5
Ubl5
Pin1
Fbxl12
Pkd1
Tmem205
Rab3d
Ccdc159
Trim65
Mrpl38
Chaf1b
Kcnc4
Rusc2
Hip1
Osbpl2
Plcb1
Pdgfb
Hcn2
Slc35f2
Hyou1
Proser2
Paqr3
B4galnt3
Prss56
Nes
Chrnd
Gpr142
Cited1
Btbd17
Flcn
Tjp2
Ap3d1
Hey2
Mdm1
Blvrb
Ankrd60
Pdpk1
Ngfr
Greb1
Tmem123
Fzd8
Wdr20
Ndst2
Hspa5
Cyth2
Ticrr
Trim71
Ltbp4
Rtn4rl1
Dph1
Rras2