ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX104231 | Limbs and tails
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◣ SRX104231: Limbs and tails

◢ SRX15046886: MEF

◢ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◢ SRX15441805: Unclassified

◢ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

T2
Rab11fip4
Cldn34d
Tcstv3
Hexb
Brox
Aida
Kpna1
Nfe2
Greb1
Myh14
Vmn2r102
Fbp2
Fgd4
Txndc11
Oasl1
Foxp2
Frmd4a
Apobec2
Clasp2
Ier2
Cdc42ep4
Sec23b
Rbbp9
Bhlhe40
Il31ra
Kctd14
Limch1
Bmp5
Padi2
Rarg
Sema4d
E030030I06Rik
Arhgef3
Oat
Mindy4
Fgfrl1
Otogl
Col16a1
Fbxw4
Lrrc75b
Ggt1
Gstm5
Slc14a2
Slc44a3
Psma8
Rai1
Zfp637
Tmem211
Abtb2
Smg9
Wwox
Gpsm2
Calr4
Gm17660
Ccser2
Ncaph
Itpripl1
Extl1
Vgll4
Inpp4a
Prrg4
Rnf38
Ccdc69
Rlbp1
Fanci
Med4
Smim38
Lep
Nt5c2
Rfk
Bsdc1
Cap1
Mtf2
Atp5g1
2900026A02Rik
Sspn
Nol11
Ap2m1
Cyth1
Kcnj16
Rsph3b
Mbnl2
Sema3b
Amotl2
Col9a3
Kras
Olfr806
Plod2
H2-DMa
Brd2
Ifna13
Marcksl1
Ttc30a1
Sympk
Foxa3
Cpa5
Ap3m2
Dchs2
Gm10710
Cnot2
Aadacl2fm1
Irf2bp2
Rab4b
Mia
Efhd2
Rgs8
Arhgef17
Papss2
Rusc2
Eipr1
Cer1
Nkx2-6
Cd209a
Gfpt1
Olfm1
Acvr1b
Csf2ra
Setd4
Cbr1
Cttnbp2nl
4930564D02Rik
Sec14l1
Ptpn14
Pgpep1
Mycbpap
9430038I01Rik
Zbtb18
Arhgef1
Tle3
Unc13c
Mfsd8
Aldh9a1
Rgs3
Sox8
Sphk1
Dab2ip
St3gal4
Phc2
Asmt
Esr1
Duxbl3
Duxbl2
Duxbl1
Nhsl1
Bcl9l
Col6a6
Mical1
Rbfox2
Etv5
Ror2
Mtss2
Dnah7b
Slc26a1
Sorbs2
Cdh12
Pp2d1
Prickle1
Tox2
Tmem125
Fli1
Ak1
Stap2
Mpnd
Cep41
Nuggc
Plekhf2
Cnn3
Stat5b
Arhgef19
Dstyk
Chadl
Rara
Ptk7
Pygo2
Pbxip1
Sv2b
Abhd6
Tmem18
Abr
Angel1
Sox5
Actg1
Fscn2
Arsi
Ttll10
Ksr1
Gzmm
Bsg
H2-T24
Kcnn4
Acsbg1
Ogfr
Ddx1
Myadm
Fmnl2
Ccdc90b
Srxn1
Fzd2
Slc35a3
Zfp24
Me1
Shc4
Defb45
Defb19
Zfp469
Nfatc1
Lrrc8a
Nedd4
Col9a1
Cops9
Cemip2
Tecpr1
Ppdpf
AI429214
Ptpre
Calcoco1
Rbm5
Zfp143
1700034J05Rik
Tns2
Mtss1
Colgalt2
Pcdh20
Calml3
Mbnl1
Mrc2
Uchl4
Zfp598
Npw
Cerk
Wdr62
Nynrin
Clip3
Crybg1
Txnip
Slc35e3
Pacs2
Ankfn1
Cxxc5
Col6a1
Nxnl1
Slc27a1
Spire1
Cobll1
Rcn1
Acsm3
Rtkn
Magi1
Snx22
Lmbrd1
F830045P16Rik
Cntn1
Scamp2
Tnrc6b
Clec2g
Pnmal2
Pabpc1l
Ntng1
Ss18l2
Nktr
Sec22c
Cbx5
Bambi
Cabcoco1
Cdhr4
Inka1
Uba7
Phldb1
Adcy5
Efnb3
Scx
Igsf8
Atp1a2
Hoxa4
Tedc1
Tmem63a
Vangl2
Plekhb1
Polr2e
Tbc1d10a
Gpx4
Tspan8
Aanat
Col8a2
Matn3
Veph1
Cracd
Rpl23a
Rab34
Proca1
Rab8a
Il25
Efs
Cmtm5
Cdkal1
Ankar
Lekr1
Dusp11
Ppp2r1a
Gm525
A930018P22Rik
Rpl27
Ifi35
Ncor2
Fxyd3
Srpk2
Rrm1
Pbx2
Gpsm3
Bahcc1
Comp
Mrpl36
Tmem185b
Syt8
Capn9
Agt
Arhgef10l
Ets1
Pgp
Mlst8
Bricd5
Tnrc18
Cxcl11
Vdr
Mcam
Ccdc34
Gm35549
Greb1l
Tgm2
Wrnip1
Rnf44
Cdhr2
Tjp3
Pip5k1c
Oga
Kmt2a
Iqch
Aagab
Cmc2
Cenpn
Fam53c
Cdc25c
Lrpprc
Phrf1
Prkdc
Mcm4
Calm3
Flcn
Cnot6
Ptcd2
Mrps27
Gipc1
Mia2
Cdiptos
Cdipt
Rita1
Ddx54
Por
Pknox1
Rpl22
Rnf207
Ppm1l
Denr
Tmem129
Tacc3
Slbp
Ccdc85c
Git2
Ankrd13a
Gm7244
Jag2
Taf15
Mmp28
Arrdc4
Septin11
Tigd5
Eef1d
Gnai2
Kctd2
Atp5h
Akirin1
Atg101
Atg12
Ap3s1
Dut
Asah1
Rmnd5a
Wdr45
Smim41
Prdm10
Was
Cenpu
Sash1
Hyal2
Hyal1
Fus
Prox2
Ndufb1
Cpsf2
Dnmt1
Arid4a
Aldh4a1
Cln8
Ptov1
Hdac2
Ift27
Arntl
Fzr1
Dohh
Tmem260
Ndst2
Tusc2
Uchl3
Uqcrh
Lrrc41
Psip1
Caskin1
Ptcd3
Polr1a
Smim24
Gm48552
Tada3
Arpc4
Rpn2
Mroh8
Prkci
Noct
Eapp
Shc1
Galnt10
Ptdss1
Mterf3
Madd
Eif3b
Nol8
Cenpp
Eed
Tex14
Wasl
Cenpe
Zbtb4
Slc35g3
Polr2a
Cbr3
Ss18
Bcl6
BC005537
Wdr77
Atp5pb
Atrnl1
Gnb2
Lsg1
Junb
Sod2
Trir
Sp2
Ube2b
Cdkl3
Rtn3
Rps29
Lrr1
Olfr855
Olfr854
Polg
Itgb4
G3bp1
Atox1
Paxip1
Raly
Dlst
Pik3r3
Flad1
Cks1b
Lenep
Myl12a
Mat2a
Idh3b
Tst
Mpst
Fbxo33
Uros
Bccip
Get3
Taf6
Mblac1
Cnpy4
Sharpin
Maf1
Cyc1
Mtmr14
Cul2
Srek1ip1
Cwc27
Diaph1
Baz2a
Zfp949
Trappc3
Map7d1
Smc3
Qrich1
Qars
Cltc
Bzw1
Tspan4
Polr2l
Cd151
Gm35339
Robo1
Cd164
Fam20b
Ajuba
Ankrd54
Oxr1
Dot1l
Rps27l
Dhrs3
Ppp1r13l
Cd3eap
Rhbdd3
Dgat2
Xpc
Lsm3
Rfx1
Ly6g6f
Abhd16a
Phlda3
Zfp219
Tmem253
Ska2
Prr11
Paip2b
Pa2g4
Abhd2
Pkia
Mylip
Nol6
Dpp9
Hexim2
Trappc9
Top2a
Rpl19
Ewsr1
Cacnb1
Slc35e2
Med1
Lrrc56
Hras
Cdk12
Rbm25
Dync1h1
Proser1
Nhlrc3
Ttc39d
Srsf7
Selenow
Hjurp
A730008H23Rik
Tmem41b
Nphp4
Kcnab2
Zfp869
Nemf
Stat1
Fbxl14
Znhit1
Plod3
Rpgrip1
Hnrnpc
Akt2
Cdca7l
Rab5b
Pmel
Cdk2
Spsb3
Nubp2
Nme3
Mrps34
Igfals
Eme2
Ubald1
Mgrn1
Ubr4
Crebzf
Dolpp1
Eif2ak3
Hmox2
Traf2
Pfdn4
Rnasek
0610010K14Rik
Cnot1
Tcp11l2
Tepsin
Ndufaf8
Atp6v0c
Amdhd2
Taf12
Gmeb1
Osbp
Bzw2
Ankmy2
Atp5b
Mmp15
Kremen1
H3c15
H3c14
H2ac19
H2ac18
Fam227b
Dtwd1
Tmem250-ps
Fam227a
Cby1
Cdt1
Aprt
Tnnc2
Per2
Gm5165
Sp1
Tom1
Rab33b
Slc1a1
Tjp2
Trpm4
Hrc
Unk
H3f3b
Abhd18
1700034I23Rik
Frat2
Snap47
Jmjd4
Wasf1
Cdc40
Dnajc16
Casp9
Rnf5
Agpat1
Slc39a3
Mvk
Mmab
Tbck
Aimp1
Ahnak
Cic
Nmral1
Susd6
Pole3
Gm3448
Gm3417
Alad
4933430I17Rik
Yif1b
Kcnk6
Stat3
Niban2
Id1
Sfi1
Rab11b
Htra2
Ctnnb1
Reep4
Hr
Dst
Hook2
Sigmar1
Nme1
Stip1
Nudt2
Kif24
Camta1
Zfp821
Get4
Ier5l
Slc35b1
Cct8
Tarbp1
Arl2
Gtf2a1
Uvssa
1700029I15Rik
Actr3
Lmnb2
Wdr92
Pno1
Atg16l2
Tmem145
Prr19
Pafah1b3
Fstl3
Tcte3
Ephb2
Utp3
Nfib
Slc30a5
Chmp7
Zxdc
Cox8c
Tbc1d17
Pnkp
Akt1s1
Acacb
Get1
Oacyl
Ints10
Mrpl21
Ighmbp2
Eef2
Ube2c
Cfap20
Ankhd1
Frmd6
Dnm2
Rbbp6
Fbxo24
Arl4d
Dqx1
Them6
Srbd1
Slurp1
Psca
Dgat1
Frat1
Tgfbi
Bbs2
Nt5c3
Rbm39
Utp14b
Osbpl1a
Acsl3
Lfng
Col6a3
9030025P20Rik
Ubd
Ilf2
1700016H13Rik
Hmgcs1
Ints4
Tbc1d31
Styxl1
Mdh2
Fkbp3
Fancm
Ermard
Nuf2
Mapkapk5
Gatad2a
Poldip3
Sorbs1
Mical3
Isy1
Fdft1
Cspp1
Cops5
Tmem218
Smim17
Erp27
Taf9
Rad17
Ak6
Angptl4
Spty2d1
Myo10
Chordc1
Cd79a
Mtch2
Tob1
Arhgap19
Dok3
Ddx41
Birc2
Lrch4
Mapk8ip1
Gramd1b
Fchsd2
Trip10
Slc25a41
Khsrp
Gpr108
Tpt1
Prkaca
Mrpl30
Mitd1
Scrt1
Wdfy2
Plekha1
Limk2
Eif4enif1
Tmem167b
Serpina3n
Oprd1
Tcerg1
Slc34a3
Trib1
Opa1
Mis12
Fnbp1
Derl2
Gfra4
Tmem107
Nfe2l1
Hexim1
Nfatc2ip
Sncg
Rassf7
Mmrn2
Lmntd2
Gm3435
Wnt10a
Pip4k2b
Mrps11
Mrpl46
Zscan25
Fam166a
Sirt4
Cct5
Atpsckmt
Clic4
Tubb4b
Hes6
Fam149b
Ecd
Kmt5c
Glrx5
Cnot3
Tcf3
Ttc14
Gpr84
Rps28
Ndufa7
Prxl2b
Zfp607b
Cdkn2c
Frmd4b
Pop7
Faf1
Nepn
Gopc
Esyt2
Samd4b
Gmfg
Prdx2
Kpnb1
Med6
Tomm40
Snrpc
Zswim4
Zfp687
Kifap3
Phlda1
Palb2
Dctn5
Smim4
Nt5dc2
Nabp1
Armc1
Psmd3
Fau
Msmo1
Slc18b1
Rps12
H4c3
H1f6
Vasp
Utp18
Tsga10
Ppm1n
Mbtd1
Lipt1
Dffb
Cep104
Ccdc124
Usp20
BC005624
Syngr1
Sema3f
Rpl3
Zfpl1
Vps51
Tmem262
Cdca5
Fem1b
Pias4
Calm1
Slc26a8
Mapk14
Ttll7
Mark3
Tfap2a
Gtf2f1
Psmd5
Trim7
Zfand3
Stk32c
Rnf125
Pan2
Il23a
Hipk2
Inip
Aard
Slc39a4
Nectin3
Emsy
Tbxa2r
Cactin
Ttc41
Hsp90b1
Plekha7
Trim41
Egr2
Nup107
Klhl21
Mideas
Prpf40a
Arl6ip6
Actn4
Ttll5
Rer1
Morn1
Erg28
Tfg
Ccnt2
Kansl3
Fer1l5
Cipc
Jund
Iqcn
AW549877
Marchf3
Rps3a1
Nfat5
Zcchc14
Crtc1
Zfp526
Dedd2
Arhgap11a
Espn
Zc3h18
Eps15
Xrcc1
Pinlyp
Nup133
Il34
Srm
Aig1
Fitm2
Fam174c
Nacc2
Map3k7
Tm7sf2
Pde3a
Kif2c
Hspa4
Zfp654
Cggbp1
Ngdn
Grin2c
Fdxr
Mdfi
Aacs
Lamp1
Ulk1
Dapk3
Fbxw7
Fosb
Vta1
Slc25a25
Cirbp
Spink5
Spdye4b
Rbak
Gpn3
Fam216a
Pip4p1
Osgep
Apex1
Ist1
Evpl
Grb2
Prss57
Rhbdl3
Ubl5
Pin1
Fbxl12
Smg1
Bmf
Map2k7
Rel
Cebpa
Hdac1
Kpna3
Smoc2
Rab28
Tsc22d1
Eif4a3
Card14
Birc5
Med23
Lig4