ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1271842 | Embryonic limb
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◣ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX15046886: MEF

◢ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◢ SRX15441805: Unclassified

◢ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

Tcstv3
Cldn34d
Kpna1
T2
Greb1
Nepn
Gopc
Brox
Aida
Asmt
Nkx2-6
Mia2
Il31ra
Phrf1
Hexb
Oga
Dnmt1
Ptcd2
Mrps27
Prkdc
Mcm4
Pknox1
Rnf44
Cdhr2
Rita1
Ddx54
E030030I06Rik
Cd164
Tjp3
Pip5k1c
Ift27
Txndc11
Sod2
Oasl1
Uchl1
Rab11fip4
1700029I15Rik
Mapk8ip1
H2-DMa
Brd2
Git2
Ankrd13a
Asah1
Duxbl3
Duxbl2
Duxbl1
Rpl22
Rnf207
Fbxw4
Fam53c
Cdc25c
Taf15
Mmp28
Aldh9a1
Tarbp1
Tmem125
Tacc1
Wasl
Fam227a
Cby1
Akirin1
Bzw2
Ankmy2
Ccdc85c
Ptov1
Cnot6
Prox2
Dlst
Dbp
Car11
Sec1
Ptcd3
Polr1a
Sash1
Ap2m1
Cmc2
Cenpn
Rarg
Tom1
Olfr806
Nphp4
Kcnab2
Paxip1
Gipc1
Dut
Rpn2
Mroh8
Calm3
Eif3b
Trip10
Gpr108
Cdiptos
Cdipt
Rusc2
Mycbpap
Tigd5
Eef1d
Iqce
Brat1
Septin11
Slc39a3
Osbpl1a
Vangl2
Abhd6
Cspp1
Cops5
Cln8
Fchsd2
Vmn2r102
Cdh12
Gm7244
Prdm10
Gm525
Them6
Slurp1
Psca
Mrps11
Mrpl46
Aldh4a1
Spata17
Gpatch2
Atp6v0c
Amdhd2
Atg12
Ap3s1
Dot1l
Por
Pfdn4
Cenpe
Rfx1
Srbd1
Madd
Lyrm1
Dcun1d3
Eed
Raly
Dnah7b
Tmem145
Prr19
Pafah1b3
Flcn
Akt2
Zfp24
Diaph1
Sp2
Slc35e2
Sspn
Ifna13
Arntl
Galnt10
Uros
Bccip
Maml2
Rab5b
Pmel
Cdk2
Olfr855
Olfr854
Dpp9
Pald1
Celsr3
Tepsin
Ndufaf8
Rab28
Iqch
Aagab
Zfp383
Zfp27
Myh14
Prkci
Wdr45
Ptdss1
Mterf3
Sharpin
Maf1
Cyc1
Gm35339
Timeless
Mip
Trpm4
Hrc
F830045P16Rik
Rpl19
Cacnb1
Olfr1274
Foxp2
Arid4a
Rbbp6
Zfp469
Rnasek
0610010K14Rik
Tcp11
Ak1
Atrnl1
Col6a6
Fbxo33
Hdac2
Prrt1
Ppt2
Kcnn4
Zfp526
Dedd2
Apobec2
Chmp3
Paip2b
Arhgef3
Pcdh9
Fzr1
Dohh
Smim24
Gm48552
Taf6
Mblac1
Cnpy4
Gnb2
Sri
Was
Zfp949
Acacb
Rlbp1
Fanci
Sec23b
Rbbp9
G3bp1
Atox1
Arrdc4
Atg101
Smim41
Oxr1
Dolpp1
Hyal2
Hyal1
Tusc2
Dgat2
Smarcal1
Uchl3
Cd209a
Cox8c
Ndufb1
Cpsf2
Fgfrl1
Arl2
Ppp1r13l
Cd3eap
Ttf1
Cfap77
Inava
Trir
Rps29
Lrr1
Srxn1
Get3
Caskin1
Pgp
Mlst8
Bricd5
Mbnl2
Sp1
Abtb2
Kctd2
Atp5h
Mat2a
Tmem129
Tacc3
Slbp
Smagp
Hmox2
Nmral1
Stx16
Lmbrd1
Zfp748
Zfp945
Trappc3
Map7d1
Prkag2
Papss2
Dnm2
Frat1
Cnot1
Ska2
Prr11
Shc1
Flad1
Cks1b
Lenep
Uqcrq
Leap2
Gdf9
Uqcrh
Lrrc41
Gzmm
Bsg
Tmem260
Traf2
Hdac1
Col9a1
Pkia
Bsdc1
Vmn2r4
Frmd4a
Rpl7l1
2310039H08Rik
Ptcra
Ly6g6f
Abhd16a
Frat2
Baz2a
Atp5b
Kdm6b
Hap1
Fgd4
Sstr3
C1qtnf6
Tada3
Arpc4
Tbc1d17
Pnkp
Akt1s1
Smg8
Gm5458
Tst
Mpst
Nfe2
Amotl2
Ndst2
Adcy5
Sema3b
Atp8a1
Tpbg
Phldb1
Srek1ip1
Cwc27
Abhd2
Atg16l2
Polg
Wasf1
Cdc40
Sox5
Apela
Bzw1
Sigmar1
Ppm1l
Bhlhe40
Hexim1
Sox8
Fbh1
Ankrd16
Ankar
Tsc22d1
Csf2ra
Nol8
Cenpp
Shc4
Utp18
Mbtd1
Ablim1
Fzd2
Myl12a
Limch1
Dab1
Lrpprc
Rsph3b
Mrpl21
Ighmbp2
Dchs2
Gm10710
Tmem102
Fgf11
Chrnb1
Mtmr14
Cnot3
Pik3r3
Cpa5
Cdc42ep4
Zfp143
Slc44a3
Tcp11l2
Uba1
Syn1
Osbp
Zdhhc5
Selenow
Colgalt2
Wwox
Ier2
Angel1
BC005537
Extl1
Ankrd54
Nfatc2ip
Psip1
Rnf130
Ppp6r3
Gzmk
Abr
Frmd6
Cttnbp2nl
4930564D02Rik
Cacna1g
Vgll4
Cic
Dcps
Lsg1
Dab2ip
Stt3a
Ets2
Zbtb4
Slc35g3
Polr2a
Eif2ak3
Wasf2
Dffb
Cep104
Ttll7
Slc35e3
Elmo2
Pkmyt1
Paqr4
Cct5
Atpsckmt
Sema4d
Rbfox2
Rassf7
Lmntd2
Zfp691
Ube2b
Cdkl3
Pip4k2b
Plekhf2
Nemf
Rtkn
Top2a
Zfp637
Ptk7
Proser1
Nhlrc3
Selenop
Ubald1
Mgrn1
Ror2
Cerk
Cbr3
Setd4
Cbr1
Wasf3
Ogfod1
Nudt21
Tle3
Smim38
Sec14l1
Zbtb18
Mrc2
Id2
Ap3m2
Sorbs2
Cdt1
Aprt
Rara
Fus
Zfp574
Grik5
Phkg1
Chchd2
Zbed5
Ndufs7
Kxd1
Fkbp8
Cemip2
Tnrc6b
Noct
Adpgk
Znhit1
Plod3
Ltbp4
Gm17660
Rptor
Ncbp2
0610012G03Rik
Spire1
Ell3
Rgs8
Rtkn2
Robo1
Rmnd5a
Cobll1
Cul2
Nudt2
Kif24
Crybg1
Ngdn
Myl12b
Tmem198b
Dnajc14
Aadacl2fm1
Ube2a
C330007P06Rik
Aaas
Rsph3a
9430038I01Rik
Mocs3
Dpm1
Wdr62
Cyp2u1
Clip3
Wdr72
Calml3
Sphk1
Lep
Smc3
Rab4b
Mia
Opa3
Ephb2
Gpsm2
Slc4a2
Cdk5
Bscl2
Gng3
Wrap53
Trp53
Irf2bp2
Tnrc18
Mylip
Tuba1b
Ncaph
Itpripl1
Arsi
Arvcf
Nf2
Scx
9230019H11Rik
Trim50
Fkbp6
Chrm1
Zfp219
Tmem253
Glrx5
Rhobtb3
Wipf1
Otogl
Col9a3
Nfatc1
Ogfr
Pnmal2
Ss18l1
Psma7
Fos
Mgll
Rpl23a
Phldb2
Rab34
Proca1
Atf7
Rhbdd3
Ewsr1
Rcc2
Zfp654
Cggbp1
Pabpn1
Ppdpf
Cer1
Cntn1
Rnf5
Agpat1
Camta1
Rai1
Swsap1
Epor
Adgra2
Cdhr4
Inka1
Uba7
Atp5g1
Fdft1
Inpp4a
Lrrc75b
Ggt1
Tmem242
Sympk
Pcdh20
Npas4
Sort1
Dok4
Unc13c
Efna4
Rpgrip1
Hnrnpc
Magi1
Tom1l2
Drc3
Lars
Fbxo24
Lrch4
Gpr15
Dcaf7
Syce1l
Mon1b
St3gal4
Med25
Fuz
Wrnip1
Mtss1
Junb
Prdx2
Rnaseh2a
Me1
Syvn1
Rab11b
Zfyve21
Xrcc3
Mapre3
Ss18
Prickle1
Arap1
Ccdc106
Zfp580
Stip1
Smim17
Mknk1
C1d
Crebrf
Marcksl1
Gsdma2
Pitpnm1
Cdk2ap2
Akap8l
Hal
Zmat2
Sv2b
Smg9
1700034J05Rik
Tns2
Cep41
Rbm5
Tex14
Kif1b
Asxl3
Nfib
Ankfn1
Dap3
Oat
Tbx15
Ung
Alkbh2
Syt8
Kpnb1
Phc2
Nlk
Got1
Ivd
Irf2bp1
Mypop
Pmvk
Ubtfl1
Dhrs3
Etv5
Plpp2
Ss18l2
Nktr
Sec22c
Map3k3
Cnot2
Ankhd1
Bcl9
Fbp2
Eif3h
Ppfia3
Lin7b
Tspan8
Prkaa1
Slc25a25
Naif1
Sparcl1
Bcl6
Tedc1
Mrpl44
Crip1
Evi5l
Wdr70
Rcl1
Zfp180
Pcx
Prelid3b
Atp5e
Trub2
Ccdc33
Igsf9b
Hmgcs1
Rgmb
Gfra1
Rab8a
Nectin3
Psma8
Rhoj
Prpf40a
Arl6ip6
Fyn
Hook2
Ypel4
Clp1
S1pr2
Scamp2
Nek6
Scamp1
Tnnc2
Ube2c
Gatad2a
Prkaca
Cdca8
9930104L06Rik
Sel1l
Znhit3
Gripap1
Tmed9
B4galt7
Pdk2
Maneal
Pcid2
Cul4a
Dok7
Rgs10
Vdr
Frmd5
Zfp687
Pde6d
Cops7b
Kras
Sox6
Kcnk2
Agpat4
Mis12
Derl2
Cxcl11
Wfikkn2
Gjb2
2900026A02Rik
Trappc6b
Pnn
Pygo2
Pbxip1
Spag7
Tomm40
Kctd14
Slc25a41
Khsrp
Tcf12
Tspan4
Polr2l
Cd151
Arhgef40
Hnrnpl
Snai1
Enah
Nol6
Arhgef1
Abhd18
1700034I23Rik
Mvk
Mmab
Copz1
Cap1
Ggct
Ets1
Tbcb
Rplp0
Polr2i
Ovol3
Gcn1
4930558K02Rik
Spag8
Hint2
Tmx2
Med19
Tpcn1
Iqcd
Tmem198
Chpf
Selenoh
Il25
Efs
Pwwp2a
Ndufs4
Cmtm5
Sin3a
Lzts2
Dhx30
Klf15
Pacs2
Fbxl14
Meis1
Katnb1
Tgfb3
Ift43
Bcl9l
Creb3l2
Per2
Snx22
Stat5b
Ugdh
Plod2
Veph1
Mapk6
Gli3
Cpt1c
Cdo1
Erp27
Ift140
Cramp1l
Id3
Ncald
Nynrin
Col16a1
Ccser2
Dync1h1
Zfp869
Mtss2
Get4
Tmem218
Mrpl30
Mitd1
Prxl2b
Ubl5
Pin1
Fbxl12
Gm51425
Mdm2
Kansl2
Zfp513
Snx17
Eif2b4
Mrpl1
Psd
Ptpre
Fbxl15
Chadl
Nap1l4
Calcoco1
Klhl20
Leprot
Cuedc2
Agrn
Zfp101
Tox2
Vps50
Otub2
Tmem160
Hepacam2
Cuedc1
Aanat
Plxna3
Hmgcll1
Slc46a3
Pgd
Magel2
Rflna
Kmt5c
Ttc41
Hsp90b1
Col9a2
Eef2
Pias4
Dapk3
Lekr1
Erg
Gfpt1
Erf
Rab40c
Myh10
Anp32e
Taf12
Gmeb1
Arid1a
Dynll1
Ttc30b
Dstyk
Smtn
Cdca7l
Opa1
Nt5c2
Zfpl1
Vps51
Tmem262
Cdca5
Nup133
Tm7sf2
Med23
3110082I17Rik
Med4
Cyth2
Tctn2
Zswim3
Acot8
Timm17b
Pqbp1
Ddx19b
Aars
Ankzf1
Asrgl1
Tle2
Wfdc21
Dcdc2a
Dcbld1
Enpp2
Ssrp1
P2rx3
Eif5
Eapp
Matn3
Slc2a1
Rgs3
Trim47
Bbx
Fam110a
Tjp2
Sptlc2
Fmnl2
Tac1
Cyp26b1
Mfsd8
Phf12
Tnni2
Cpa1
Cabcoco1
Nup93
Cnn3
Ppargc1a
Plekhb1
Zswim4
Rnf38
Yipf2
Timm29
Gins2
Chmp6
Bcas3
Drg2
Phb
D16Ertd472e
Ddx1
Kdm2b
Padi2
Tomm22
Tspan33
Plin1
1700029P11Rik
Pan2
Il23a
Vps25
Wnk4
Ensa
Pcdh1
Gnas
Olfml2a
Nr6a1
Kat6b
Dhx35
Art4
Dcaf11
Actg1
Fscn2
Csk
Angptl1
Ccn1
Ift81
Rtn3
Qrich1
Qars
Gm5165
Fkbp3
Fancm
Tcerg1
Palb2
Dctn5
Tdrkh
Srp68
Galr2
Ncf2
Tma16
Rbm27
Rnf26
C1qtnf5
Elf1
Tspan14
Dnttip2
Slc26a1
Bckdk
Vkorc1
Kat8
Mrps10
Pp2d1
Tdrp
Sdsl
Sds
Inip
Ap2a1
Mro
Pde3a
Ptpn14
Srpk2
Tomm70a
Lancl2