ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1035108 | Chondrocytes
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◣ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX15046886: MEF

◢ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◢ SRX15441805: Unclassified

◢ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

Igsf8
Atp1a2
Tcstv3
Slc1a1
Sec14l1
Plekhh2
Gstm5
Tmem250-ps
T2
Col6a3
Il34
Hipk2
Id1
Klk11
Klk10
Slc14a2
Mdfi
Mtss2
Gjc3
Calml3
Gnai2
Zfp385b
Myadm
Aig1
Myh14
Mark3
Dhx32
Rab17
Fam89a
Rbm25
Lemd1
Fam110b
Unc13d
Clic4
Sh2d5
Mtus1
Col2a1
Nt5c3
Zfand2a
Sorbs1
Oacyl
Nacc2
Col16a1
Cytl1
Ap2m1
Cst6
Catsper1
Csgalnact1
Phlda1
Ercc2
Slc23a4
Erp27
Bhlhe40
Itgb4
Rin2
Gstp2
Gstp1
Myo10
Cldn34d
Slc14a1
Cd109
Rpl27
Ifi35
Trhr2
Adssl1
Prox2
Zfp532
Ccdc8
Dhrs3
Alg14
Ccser2
Arhgef1
Cd79a
Folr2
Sstr3
C1qtnf6
Map4k4
Klhl21
Acaa1b
Col9a2
Sppl2a
Ttyh2
Rpl38
Tnfsf10
Sh3kbp1
Fry
Cebpg
Qpct
Etv5
Hexa
Chic2
Amotl2
Plekhb1
Poldip3
Whrn
Sdc4
Rab11fip4
Klhl22
Sec16b
Map4k5
Atl1
Plb1
Klk9
Klk8
Plcd1
Fmod
Frmd4a
Pmepa1
Kif13b
Slc29a1
Mymx
Bmp5
Cd300c
H2-DMa
Brd2
Tgfbi
Actn4
Sh3pxd2a
Tmco3
Dcun1d2
Dpp7
Hsd11b1
Tut4
Cdk9
Sh2d3c
Fgd4
Prss22
Flot2
Dhrs13
Tanc1
Smg9
Uqcc2
Sgk3
Arsg
Sparcl1
Mast2
Dlc1
Dab2ip
Mrps31
Smoc1
Sppl3
Mall
Fam53c
Cdc25c
Lsg1
Pdss2
Ltbp4
Rabggta
Emp1
Anln
9530077C05Rik
Comp
Rpl22
Rnf207
Ap5z1
Msmo1
Eno1
Phrf1
Ttll10
Smim17
Efhd2
Gpr84
Ctxn3
Zfp469
Frmd4b
Lrrc45
Cenpx
Anks1b
Ubtd1
Mms19
Angptl2
Arf2
Meltf
Fau
Septin9
Gm14461
Denr
Col11a1
1700034J05Rik
Adgra3
Gas7
Slc22a4
Fzr1
Dohh
Smim24
Gm48552
Asgr1
Il1r1
Paip2
Mllt11
Cdc42se1
Ss18l2
Nktr
Sec22c
Zfp648
Tnfrsf26
Fam83f
C1qtnf3
Serpina3n
Prf1
Gm33887
1600014C23Rik
Ppp2r5c
Bst1
Kpna1
2310061N02Rik
Arntl
Col9a3
Itga5
Cubn
Arhgap19
Asmt
Gm29825
Farp1
Ipcef1
Hip1r
Zpld1
Ncf2
Spns2
Mfn2
Kctd4
Ankrd54
Fam53b
Btbd16
Ptger1
Ldlrad3
Arsj
Gm973
Dhx33
Gtf3c5
Il1rl1
Bin3
Tarbp1
Pcyt1a
Gsdme
Gpc6
Zfp24
Trpv4
Uqcrh
Lrrc41
Lbh
Tmem144
Sgms2
Abhd1
Cgref1
Lama4
Prss53
Vkorc1
Stra8
Tjp2
Ltbp1
Slc25a45
Frmd8
Zmynd8
Gadd45g
Oga
Prune2
Il17rb
Chdh
Gramd1b
Mid2
Cobll1
Ank1
Emb
Ahnak
Echdc3
Prkdc
Mcm4
Tnrc18
Col6a1
Scube2
Rac1
Fmn1
Sulf1
Sec14l2
Ppil3
Nif3l1
Pycrl
Gfus
Phyhd1
Cfap100
Slc22a20
Arrdc4
Tmed4
Ddx56
Krt79
Bnip2
Kcnmb3
Rnase10
Clmn
Snai1
Dnmbp
Cbx2
Gc
Trim47
Loxl3
Dok1
Pfkp
Tbccd1
Dnajb11
Cd9
Oaf
Rbm17
Ppat
Paics
Spink2
Snx22
Top2a
Snx24
Cldn18
Tbc1d10a
Inf2
Cdyl
Pou2af1
Tiam2
Niban2
Wdr36
Pak6
Aox1
Cenpu
Tmcc3
Me1
Uvssa
Matn3
Ibtk
Slc39a14
Pacsin2
Pkn3
Hrob
Uba3
Arl6ip5
Sec11c
Asph
St3gal3
Il18
Bco2
Tex12
Rubcn
Chordc1
Ninj1
Olig2
Gfpt2
Dok5
Tbc1d31
Fxyd3
Mrpl1
Mpl
Slc9b2
Fam240a
Dnmt1
Nlrp10
Eif3f
Nvl
Cnih4
Dgkd
Dtx1
Fgfrl1
Itpr3
Fem1b
Lect2
Timp1
Rapgef1
Msh3
Dhfr
Nipal2
Fam169b
Has1
Fam107b
Nup93
Zfp386
Ccdc121
Sox6
Kif2c
Pdlim4
Slc2a9
Polg
Vta1
Cdk5rap2
Tgfa
Gsn
Mad1l1
Utp3
Isy1
Wdr26
Krr1
Gstm7
Gstm6
Ppfibp1
Rnf44
Cdhr2
Brox
Aida
Apobec2
Nt5e
Nkx2-6
Spty2d1
Gast
Mrpl21
Ighmbp2
Tfg
Tram2
Txndc11
Parpbp
Nup37
Aldh4a1
Il6st
Taf15
Mmp28
Mmp15
Emilin3
Stk32b
Nfatc2ip
Ica1
Tekt3
Zfp748
Znhit1
Plod3
Rtn4
Mest
Rbp3
Gdf2
Rhoc
Ppm1j
Plcb2
Tuba1b
Ift27
Ppp2ca
Cyb5r3
Crb2
Fam166b
Mmp12
Greb1
Tmem41b
Tsga13
Aanat
Tex14
Sp2
Tmem218
Med23
Eppk1
BC024139
Slc39a3
Adamtsl4
Col27a1
Adgra1
Chst3
Pdzrn4
Cic
Nudt13
Il17ra
Slc2a1
Gm829
Elf3
Gpaa1
Exosc4
Tmem212
Rpgrip1
Hnrnpc
Mgat4a
Ubr4
Arhgef7
Drg2
C77080
Dsg2
Tlr5
Spire1
Pmp22
Igfbp1
Tcerg1
Fam25c
Slc39a4
Kdm1a
Vps28
Dcp1a
P4ha2
Serpinh1
Dst
Angptl4
Bend6
Ngef
Ptcd2
Mrps27
Sft2d3
Lims2
Ecrg4
Arid4a
Snx18
Mtus2
Ccn4
Slc35e3
Ptpre
Mrpl30
Mitd1
Plcxd1
Ankrd35
S100a3
S100a4
S100a2
Bsdc1
Lats2
Rnf11
Arl4d
Ska2
Prr11
Sox8
Tubgcp6
Hdac10
Flnb
Mbp
Timm10
Smtnl1
Smad5
Rnf5
Agpat1
Dcn
Slc25a41
Khsrp
Kctd14
Fam135a
1810058I24Rik
Dusp12
Il31ra
Psmd3
Lrpprc
Plcg2
Fosb
Ube2f
Tnfaip8
Fyn
Ints1
Rita1
Ddx54
Aebp2
Tut1
Glt28d2
Cry2
Fank1
Hyal2
Hyal1
Tusc2
Shc1
Flad1
Cks1b
Lenep
Mideas
Sun1
Prss46
Prss45
Anapc5
Cracd
Madd
Ppp6c
Rab31
Ppp4r1
Aadacl2
Cstf2t
Prcc
Pdrg1
Eed
Kdsr
Nedd4
Tmed9
B4galt7
Trib3
Rfx1
Tnfrsf13b
Wwox
Rnase4
Ang
Gm17455
Hspa12a
Sec23b
Rbbp9
Gm1604b
Gjb1
Ints10
Fam149b
Ecd
Slc25a25
Snrnp200
1810024B03Rik
Doc2g
Ndufv1
Hbs1l
St6galnac6
Xlr3b
Ablim1
Nkd1
Ric8b
Atp10a
Piezo1
Esm1
Jade2
Rps7
Rab11b
Slc35d1
Phyhip
Mat2a
Itgb6
Tcea3
Calm3
Tnn
Kifc3
Bmp4
Furin
Trpm1
Mrpl48
Arhgef3
Smg8
Arfgef2
Bach2
Ywhaq
Tmem101
Fzd7
Tmem100
Baiap2
Panx3
Icos
Trib1
Marcksl1
Smox
Pde10a
Gm5165
Neurl1a
Zfp869
E230025N22Rik
Atg101
Smim41
Rbm5
Extl1
Tnfrsf8
Itgb3
Gnb4
Cyp4a29
Zbtb40
Srsf10
Hmox1
Gsto2
Kank2
Kat2b
Cmklr1
Ddx20
Gucy2g
Mrpl44
Ap4e1
Card19
Cln8
Klf4
Glo1
1700034E13Rik
Slc35e4
Olfr1410
Olfr12
Galk2
Cops2
Nelfa
Trub2
Wdfy2
Atg7
Gzmk
Ino80c
Hexim2
Rab21
Irf2bpl
Taf12
Gmeb1
Map3k5
Acrbp
Ing4
Btg1
Rptor
Mcfd2
Ttc7
Casp6
Knl1
Tubb5
Mdc1
Sim2
Grin2c
Fdxr
Htra2
Dqx1
Zfp738
Lgals3
Numb
Mat1a
Sema3b
Pde3a
Mgp
Rock2
Mgll
Mcm3
Fam180a
Smim3
Snrpc
Zfp821
Rgs3
Ist1
Dhx8
Nptxr
Shf
Vars2
Gtf2h4
Rufy1
Krt36
Krt13
Map3k14
Tgm2
Zfp169
Cipc
Srp19
Zbtb2
Creb5
Dennd1b
Cdt1
Aprt
Ipo5
Lmna
Lmtk2
Rab4b
Mia
Sh3pxd2b
S100a10
Atp6v0a4
Slc33a1
Kcnh2
Nos3
Hdac2
Arpc1b
Mast4
Anxa4
Iqch
Aagab
Cct8
Lgals7
Enah
Dock1
Proser2
Stk3
Sema3e
Jam2
Ppp1r11
Znrd1as
Znrd1
Rnf39
Ptpn3
Gcnt2
Pole2
Atg12
Ap3s1
Ptov1
Rhoq
Usp4
Gpx1
Sertad4
Dad1
Abhd4
Epyc
Dhx16
Mapre2
Ehd3
Hilpda
Smad7
Slc27a6
Otogl
Washc1
Ndufv2
Capns1
Myo5c
Dnajc16
Casp9
Cavin1
Txnl4b
Dhx38
Ier3
Flot1
Kdm6b
Ltbp3
Inka2
Mtmr2
Uxs1
Rslcan18
Abca9
Th
Get1
Nr1d1
Fgf2
Sphk2
Spaca4
Rpl18
Fam83e
Tnp2
Socs1
Prm3
Prm2
Lrwd1
Alkbh4
Rab5b
Pmel
Cdk2
Osbp
Ube2j2
Agfg1
Plec
Diaph1
Nudt2
Kif24
Dffb
Cep104
Ifnlr1
Baz2a
Atp5b
Clk4
BC049762
Tns2
Gsg1
Bms1
Wdr48
Prkci
Iqsec1
Gjb5
Gjb4
Rtn3
Nr1h3
Acp2
Irf2bp2
Armc1
Tmem63a
Lefty1
Deaf1
Eps8l2
B3gnt5
Wdr92
Pno1
Nuf2
Mtmr6
Fhl2
Fem1a
Ticam1
Col9a1
Tmem167b
Postn
Eif3b
Nop14
Grk4
Prss48
Cldn10
Hagh
Fahd1
Dok2
Xpo7
Yipf2
Timm29
Arl10
4833439L19Rik
Abi1
Map9
Col17a1
Katnb1
Rere
Tead4
Ier5l
Kifc5b
Mgl2
Tmem260
Rbm34
Dusp22
Gprc5a
Msi2
Xlr4a
Xlr3a
G3bp1
Atox1
Prr12
Prrg2
Nosip
Ing3
Cblb
Gpd1
Mlph
Zmat5
Uqcr10
1190005I06Rik
Tbc1d22a
Bgn
Prss56
Chrnd
Hal
Mmachc
Ccdc163
Tmed10
Krtap1-5
Krtap1-4
Krtap1-3
Cltc
Btbd9
Por
Ugdh
Sgcd
Ergic1
Pde1a
Kctd7
Rdh8
Col5a3
Nufip2
Inhba
Rcan1
Pkp2
Dhrs9
Dpp9
Micall1
Ahcyl2
Tulp4
Sdc1
Veph1
Pcolce2
Psrc1
Arhgap11a
Car5a
Banp
Lrriq3
Fpgt
Kcnk3
Alx1
E030030I06Rik
Ssbp1
Acot7
Filip1
Zbtb5
Polr1e
Ccn2
Fbxo17
Neil2
Slc18b1
Rps12
Arid1a
C2cd5
Ndufs2
Adamts4
Prune1
Mindy1
Stard13
Ints4
Ctsb
Acsl1
Slc39a2
Mettl17
Ripk3
Adcy4
Hspg2
Anxa11
Xlr3c
Krt16
Upp2
Ubxn10
Dot1l
Rrbp1
Dnajc24
Emilin1
Ost4
Tubb2a
Guca2b
Cav1
Limd1
Dut
Nup54
Sipa1l2
Gm45623
Txndc2
BC005537
Egr2
Rfxank
Nr2c2ap
Gm45929
Borcs8
Ruvbl1
Adipor2
Lzts2
Znrf4
Twnk
Ncan
Fbxo21
Medag
Plekha5
Papss2
Gramd3
Xab2
Stxbp2
Pet100
Pcp2
Zfp317
Trp53rkb
Cass4
Eif2ak3
Atp5g2
Mis18a
Tnfaip6
Srp72
Banf2
Cdsn