ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX130589 | Neural tube
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX15046886: MEF

◢ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◣ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◢ SRX15441805: Unclassified

◢ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

Tcstv3
T2
Rab11fip4
Hexb
Greb1
Cldn34d
Brox
Aida
Nfe2
Kpna1
Col16a1
Rarg
Cdc42ep4
Myh14
Dab2ip
Fgd4
Slc44a3
Olfr806
E030030I06Rik
Fbp2
Rlbp1
Fanci
Txndc11
Vangl2
Wwox
Otogl
Ier2
Apobec2
Inpp4a
Smim38
Smg9
Vgll4
Sec23b
Rbbp9
Foxp2
Frmd4a
Bhlhe40
Il31ra
Ccdc69
Aldh9a1
Olfr1274
Sema3b
Rgs8
Kctd14
Cemip2
Aadacl2fm1
Psma8
Mtf2
Asmt
Cdhr4
Inka1
Uba7
Unc13c
Srxn1
Bcl9l
Dnah7b
Lrrc75b
Ggt1
Esr1
Setd4
Cbr1
Sema4d
Bsdc1
Oat
Mfsd8
Slc35a3
Shc4
Bmp5
Cobll1
Rara
Extl1
Tecpr1
Dchs2
Gm10710
Etv5
Cd209a
Abhd6
Col6a6
Lmbrd1
Tmem125
Clasp2
Rbfox2
Amotl2
St3gal4
Adcy5
Gm17660
Tmem18
Nkx2-6
Mbnl1
Arhgef1
Gm525
Slc14a2
Arhgef3
Oasl1
Prrg4
Rai1
Ap3m2
Sox5
Fbxw4
Zfp469
Chadl
Sspn
Abtb2
Sox8
Crebzf
Fgfrl1
Irf2bp2
Tle3
Mbnl2
Tox2
Ak1
Rab4b
Mia
Cyth1
Tmem115
Dcaf5
Mycbpap
Ccser2
Rgs3
Papss2
H2-DMa
Brd2
Ss18l2
Nktr
Sec22c
Ccdc90b
Cerk
Pgpep1
Padi2
Ifna13
Mapk6
Abhd18
1700034I23Rik
Pbx2
Gpsm3
Arhgef17
Tsc22d1
Tent5c
Lekr1
Pp2d1
Aaas
Pld1
Gstm5
Rnf38
Spire1
Duxbl3
Duxbl2
Duxbl1
Med4
Zfp637
Ddx1
Sympk
Foxa3
Rsph3b
Myadm
Cnn3
Fzd2
Plekhf2
Cxcl11
Zbtb18
1700034J05Rik
Cap1
Sphk1
Gfpt1
Ankfn1
Vmn2r102
F830045P16Rik
Sfi1
2900026A02Rik
9430038I01Rik
Kcnj16
Cttnbp2nl
4930564D02Rik
Lrrc8a
S1pr2
Ptk7
Efhd2
Pygo2
Pbxip1
Me1
Hgsnat
Lamp1
Calr4
Nuggc
Magi1
Ncaph
Itpripl1
Gm3776
Cxxc5
Abr
Colgalt2
Notch1
Cpa5
Rusc2
Ppdpf
Plod2
Calcoco1
Cltc
Phc2
Ptpre
Rrm1
Csrnp3
Cep41
Phldb1
Marcksl1
Tgm2
Limch1
Stat5b
Mrc2
Prdm2
Igsf8
Prickle1
Arhgef19
Rsph3a
Ppp1r1b
Stard3
Rhoj
Grin2b
1700029P11Rik
Ttll10
Arhgef10l
Kras
Pde6a
Sec14l1
Pcdh1
Fxyd3
Col9a3
Ogfr
Lep
Crybg1
Nt5c2
Mtss1
Grk5
Tbc1d10a
Ptpn14
Sort1
Dcdc2a
Arsi
4930447A16Rik
Dynlrb1
Polr2e
Gpx4
Gm614
Cntn1
Foxo4
Il2rg
Tns2
Zbed3
Ppfibp1
Rnf44
Cdhr2
Tjp3
Pip5k1c
Oga
Kmt2a
Iqch
Aagab
Cmc2
Cenpn
Fam53c
Cdc25c
Lrpprc
Phrf1
Prkdc
Mcm4
Calm3
Flcn
Cnot6
Ptcd2
Mrps27
Gipc1
Mia2
Cdiptos
Cdipt
Rita1
Ddx54
Por
Pknox1
Rpl22
Rnf207
Ppm1l
Denr
Tmem129
Tacc3
Slbp
Ccdc85c
Git2
Ankrd13a
Gm7244
Jag2
Taf15
Mmp28
Arrdc4
Septin11
Tigd5
Eef1d
Gnai2
Kctd2
Atp5h
Akirin1
Atg101
Atg12
Ap3s1
Dut
Asah1
Rmnd5a
Wdr45
Smim41
Prdm10
Was
Cenpu
Sash1
Hyal2
Hyal1
Fus
Prox2
Ndufb1
Cpsf2
Dnmt1
Arid4a
Aldh4a1
Cln8
Ptov1
Hdac2
Ift27
Arntl
Fzr1
Dohh
Tmem260
Ndst2
Tusc2
Uchl3
Uqcrh
Lrrc41
Psip1
Caskin1
Ptcd3
Polr1a
Smim24
Gm48552
Tada3
Arpc4
Rpn2
Mroh8
Prkci
Noct
Eapp
Shc1
Galnt10
Ptdss1
Mterf3
Madd
Pgp
Mlst8
Bricd5
Eif3b
Nol8
Cenpp
Eed
Tex14
Wasl
Cenpe
Zbtb4
Slc35g3
Polr2a
Cbr3
Ss18
Bcl6
BC005537
Wdr77
Atp5pb
Atrnl1
Gnb2
Lsg1
Junb
Sod2
Trir
Sp2
Ube2b
Cdkl3
Rtn3
Rps29
Lrr1
Olfr855
Olfr854
Polg
Itgb4
G3bp1
Atox1
Paxip1
Raly
Dlst
Pik3r3
Flad1
Cks1b
Lenep
Myl12a
Zfp143
Mat2a
Idh3b
Tst
Mpst
Fbxo33
Uros
Bccip
Get3
Taf6
Mblac1
Cnpy4
Sharpin
Maf1
Cyc1
Mtmr14
Cul2
Srek1ip1
Cwc27
Diaph1
Baz2a
Zfp949
Trappc3
Map7d1
Smc3
Qrich1
Qars
Bzw1
Tspan4
Polr2l
Cd151
Gm35339
Robo1
Cd164
Fam20b
Ajuba
Ankrd54
Oxr1
Dot1l
Rps27l
Dhrs3
Ppp1r13l
Cd3eap
Rhbdd3
Dgat2
Xpc
Lsm3
Rfx1
Ly6g6f
Abhd16a
Phlda3
Zfp219
Tmem253
Ska2
Prr11
Paip2b
Pa2g4
Abhd2
Pkia
Mylip
Nol6
Dpp9
Hexim2
Trappc9
Top2a
Rpl19
Ewsr1
Cacnb1
Slc35e2
Med1
Lrrc56
Hras
Cdk12
Rbm25
Dync1h1
Proser1
Nhlrc3
Ttc39d
Srsf7
Selenow
Hjurp
A730008H23Rik
Tmem41b
Nphp4
Kcnab2
Zfp869
Nemf
Stat1
Fbxl14
Znhit1
Plod3
Rpgrip1
Hnrnpc
Akt2
Cdca7l
Rab5b
Pmel
Cdk2
Spsb3
Nubp2
Nme3
Mrps34
Igfals
Eme2
Ubald1
Mgrn1
Ap2m1
Ubr4
Mtss2
Dolpp1
Eif2ak3
Hmox2
Traf2
Calml3
Pfdn4
Rnasek
0610010K14Rik
Cnot1
Tcp11l2
Tepsin
Ndufaf8
Atp6v0c
Amdhd2
Taf12
Gmeb1
Osbp
Bzw2
Ankmy2
Atp5b
Mmp15
Kremen1
H3c15
H3c14
H2ac19
H2ac18
Fam227b
Dtwd1
Tmem250-ps
Fam227a
Cby1
Cdt1
Aprt
Tnnc2
Per2
Gm5165
Sp1
Tom1
Rab33b
Slc1a1
Tjp2
Tnrc6b
Trpm4
Hrc
Unk
H3f3b
Frat2
Snap47
Jmjd4
Wasf1
Cdc40
Dnajc16
Casp9
Rnf5
Agpat1
Slc39a3
Mvk
Mmab
Tbck
Aimp1
Ahnak
Cic
Nmral1
Susd6
Pole3
Gm3448
Gm3417
Alad
4933430I17Rik
Yif1b
Kcnk6
Stat3
Niban2
Id1
Rab11b
Htra2
Ctnnb1
Reep4
Hr
Dst
Hook2
Atp1a2
Sigmar1
Nme1
Stip1
Nudt2
Kif24
Camta1
Zfp821
Get4
Ier5l
Slc35b1
Cct8
Atp5g1
Tarbp1
Arl2
Gtf2a1
Uvssa
1700029I15Rik
Actr3
Lmnb2
Wdr92
Pno1
Atg16l2
Tmem145
Prr19
Pafah1b3
Fstl3
Tcte3
Ephb2
Utp3
Nfib
Slc30a5
Chmp7
Zxdc
Cox8c
Tbc1d17
Pnkp
Akt1s1
Acacb
Get1
Oacyl
Ints10
Mrpl21
Ighmbp2
Eef2
Ube2c
Cfap20
Ankhd1
Frmd6
Dnm2
Rbbp6
Fbxo24
Arl4d
Dqx1
Them6
Srbd1
Slurp1
Psca
Dgat1
Frat1
Tgfbi
Txnip
Bbs2
Nt5c3
Rbm39
Utp14b
Osbpl1a
Acsl3
Lfng
Col6a3
9030025P20Rik
Rpl27
Ifi35
Ubd
Ilf2
1700016H13Rik
Hmgcs1
Ints4
Tbc1d31
Styxl1
Mdh2
Fkbp3
Fancm
Ermard
Nuf2
Mapkapk5
Gatad2a
Poldip3
Sorbs1
Mical3
Isy1
Fdft1
Cspp1
Cops5
Tmem218
Smim17
Erp27
Taf9
Rad17
Ak6
Angptl4
Spty2d1
Myo10
Chordc1
Cd79a
Mtch2
Tob1
Arhgap19
Dok3
Ddx41
Birc2
Lrch4
Mapk8ip1
Gramd1b
Fchsd2
Trip10
Slc25a41
Khsrp
Gpr108
Tpt1
Prkaca
Mrpl30
Mitd1
Scrt1
Wdfy2
Plekha1
Limk2
Eif4enif1
Tmem167b
Gzmm
Plekhb1
Serpina3n
Oprd1
Tcerg1
Slc34a3
Trib1
Opa1
Mis12
Fnbp1
Derl2
Gfra4
Tmem107
Nfe2l1
Hexim1
Nfatc2ip
Sncg
Rassf7
Mmrn2
Lmntd2
Gm3435
Wnt10a
Pip4k2b
Mrps11
Mrpl46
Zscan25
Fam166a
Sirt4
Cct5
Atpsckmt
Clic4
Tubb4b
Hes6
Fam149b
Ecd
Kmt5c
Glrx5
Cnot3
Tcf3
Ttc14
Gpr84
Rps28
Ndufa7
Prxl2b
Zfp607b
Cdkn2c
Frmd4b
Pop7
Faf1
Nepn
Gopc
Esyt2
Samd4b
Gmfg
Prdx2
Kpnb1
Med6
Zfp24
Tomm40
Snrpc
Zswim4
Zfp687
Kifap3
Phlda1
Palb2
Dctn5
Smim4
Nt5dc2
Nabp1
Armc1
Psmd3
Fau
Msmo1
Slc18b1
Rps12
H4c3
H1f6
Vasp
Utp18
Tsga10
Ppm1n
Mbtd1
Lipt1
Dffb
Cep104
Ccdc124
Usp20
BC005624
Syngr1
Sema3f
Rpl3
Zfpl1
Vps51
Tmem262
Cdca5
Fem1b
Pias4
Calm1
Slc26a8
Mapk14
Ttll7
Mark3
Tfap2a
Gtf2f1
Psmd5
Trim7
Zfand3
Stk32c
Rnf125
Pan2
Il23a
Hipk2
Inip
Aard
Slc39a4
Nectin3
Emsy
Tbxa2r
Cactin
Ttc41
Hsp90b1
Plekha7
Trim41
Egr2
Rbm5
Nup107
Klhl21
Mideas
Prpf40a
Arl6ip6
Actn4
Ttll5
Rer1
Morn1
Erg28
Tfg
Ccnt2
Kansl3
Fer1l5
Cipc
Jund
Iqcn
AW549877
Marchf3
Rps3a1
Nfat5
Zcchc14
Crtc1
Zfp526
Dedd2
Arhgap11a
Espn
Zc3h18
Eps15
Xrcc1
Pinlyp
Nup133
Il34
Srm
Aig1
Fitm2
Fam174c
Nacc2
Map3k7
Tm7sf2
Pde3a
Kif2c
Hspa4
Zfp654
Cggbp1
Ngdn
Grin2c
Fdxr
Mdfi
Aacs
Ulk1
Dapk3
Fbxw7
Fosb
Vta1
Slc25a25
Cirbp
Spink5
Spdye4b
Rbak
Gpn3
Fam216a
Pip4p1
Osgep
Apex1
Ist1
Evpl
Grb2
Prss57
Rhbdl3
Ubl5
Pin1
Fbxl12
Smg1
Bmf
Map2k7
Rel
Cebpa
Hdac1
Kpna3
Smoc2
Rab28
Eif4a3
Card14
Birc5
Med23
Lig4
Cks2
Abhd13
Sde2
Sgms1
Zfp574
Grik5
Gm51425
Lypla2
Gale
Ap2a1
Arhgef4
Uqcrq
Leap2
Gdf9
Zfp385b
Tmco3
Dcun1d2
Kcnn1
Ier5
Wdr81
Vwa1
Tlcd2
Rgl2
Eif1
Sdc4
Ltbp1
Chpf2
Abcf2
Tbccd1
Dnajb11
3110082I17Rik
Npr1
Dap3
Supv3l1
Rwdd1
Copz1
Ube2a
Fam3c
Ube2d3
Gorasp2
Mef2a
Glce
Zfat
Kcna7
Bod1l
Eif4e
Ift140
Cramp1l
Anln
9530077C05Rik
Poc5
Wdr27
N4bp2l2
1600012H06Rik
Uqcc2
Ubald2
Olfml2a
Nr6a1
Mknk1
Zbtb40
Rps7
Lemd1
Arf2
Snx22
Ifi30
Meis1
Rfxank
Nr2c2ap
Gm45929
Borcs8
Tnrc18
Rasip1