ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1035119 | Embryonic nose
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◣ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX15046886: MEF

◢ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◢ SRX15441805: Unclassified

◢ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

Gnai2
Phrf1
Rnf44
Cdhr2
Tjp3
Pip5k1c
Fam53c
Cdc25c
Atg12
Ap3s1
Tcstv3
Sp2
Arrdc4
Cmc2
Cenpn
Oga
Ndufb1
Cpsf2
Septin11
Lrpprc
Taf15
Mmp28
Rita1
Ddx54
Iqch
Aagab
Tigd5
Eef1d
Cnot6
Slc14a2
Rtn3
Calml3
Arntl
Cln8
Smim4
Nt5dc2
Psip1
Hdac2
Flcn
Shc1
Flad1
Cks1b
Lenep
T2
Rfx1
Arid4a
Prkdc
Mcm4
Myh14
Tst
Mpst
Asah1
Tmem260
Col6a3
Smc3
Eed
Nol8
Cenpp
Fus
Galnt10
Sod2
Git2
Ankrd13a
Sec14l1
Osbp
Calm3
Ptcd2
Mrps27
Uchl3
Abhd2
Bhlhe40
Tmem129
Tacc3
Slbp
Col16a1
Hyal2
Hyal1
Tusc2
Atrnl1
Sash1
Ska2
Prr11
Ptov1
Rpgrip1
Hnrnpc
Prkci
Caskin1
Pgp
Mlst8
Bricd5
Dut
Tada3
Arpc4
Gipc1
Aldh4a1
Rpl22
Rnf207
Fzr1
Dohh
Smim24
Gm48552
Ankrd54
Cdiptos
Cdipt
Ppm1l
Pkia
Rab5b
Pmel
Cdk2
Slc1a1
Zfp469
Nphp4
Kcnab2
Cenpu
Eif2ak3
Idh3b
Ptdss1
Mterf3
Igsf8
Atp1a2
Sharpin
Maf1
Cyc1
Gm35339
Pik3r3
Gm7244
Prdm10
Ttll7
Ptcd3
Polr1a
Rpn2
Mroh8
Ephb2
Ndst2
Dolpp1
Wdr45
Por
Rbm25
Akirin1
Rmnd5a
Zxdc
Ift27
Tnnc2
Ube2c
Tepsin
Ndufaf8
Srek1ip1
Cwc27
Atg101
Smim41
Uros
Bccip
Selenow
Spty2d1
Pknox1
Fbxo33
G3bp1
Atox1
Sgms1
Bzw1
Uqcrh
Lrrc41
Dnmt1
Noct
Rab11fip4
Uqcc2
Diaph1
Rnf5
Agpat1
Madd
Robo1
Zfp219
Tmem253
Tmem218
Fkbp3
Fancm
Prox2
Dlst
Paxip1
Arhgef1
Cd79a
Taf6
Mblac1
Cnpy4
Srbd1
Was
Ppp1r13l
Cd3eap
Cnot1
Rnasek
0610010K14Rik
Slc36a4
Rel
Slc25a41
Khsrp
Trappc3
Map7d1
Baz2a
Atp5b
Them6
Slurp1
Psca
Nlk
Cspp1
Cops5
Cul2
Dpp9
Adgrv1
Hmox2
Nmral1
Tcerg1
Brox
Aida
Ttll10
Ankhd1
Sp1
Trip10
Gpr108
Cenpe
Gstm5
Mrpl21
Ighmbp2
Wasf1
Cdc40
1700029I15Rik
Mapk8ip1
Dync1h1
Trpm4
Hrc
Med23
Fam227a
Cby1
H2-DMa
Brd2
Tcp11l2
Top2a
Gm5165
Mia2
Nt5c3
Mtss2
Ccser2
Zfp869
Rpl27
Ifi35
Rab11b
Rab21
Oxr1
Cltc
Tom1
Nfatc2ip
Mis12
Derl2
Ly6g6f
Abhd16a
Slc39a3
Arhgap19
Ccdc85c
Eif3b
Fam204a
Ap2m1
Ss18
Slc35e2
Sh3kbp1
Cd164
Med1
Cdk12
Nudt2
Kif24
Bcl6
Mat2a
Rbbp6
Wwox
Armc1
Id1
Greb1
Kctd2
Atp5h
Frat1
Raly
Jun
Myl12a
Palb2
Dctn5
Gnb2
Parpbp
Nup37
Per2
Myadm
Frat2
Dnm2
Kpna1
Klhl26
Tmem59l
Bzw2
Ankmy2
Dgat2
Cdca7l
Frmd4a
Txndc11
Glo1
Cytl1
Zfp821
Ist1
Rin2
Zfp24
Paip2b
Oacyl
Fsbp
Ube2b
Cdkl3
Cyth1
Smim14
Srgap2
Fam72a
Macrod1
Cic
Qrich1
Qars
Prkaca
Mllt11
Cdc42se1
Cdca8
9930104L06Rik
Nufip1
Gpalpp1
Tbc1d17
Pnkp
Akt1s1
Tmem145
Prr19
Pafah1b3
Aacs
Tcp11
Fgd4
Sigmar1
Arid3c
Syn1
Trhr2
Ttc41
Hsp90b1
Fbxo24
Lrch4
Dhx32
Rhbdd3
Ewsr1
3110082I17Rik
Uba1
Stt3a
Utp18
Mbtd1
Akt2
Ahnak
Wasl
Jpt2
Smoc1
Mfsd8
Hars2
Hars
Trappc6b
Pnn
Immp1l
Elp4
Il34
Dhrs3
Gatad2a
Rlbp1
Fanci
Kmt5c
Tmem9b
BC005537
Zfp143
Rnf26
C1qtnf5
Lsg1
Nup54
Tbck
Aimp1
Glrx5
Kdm4b
Stip1
Katnb1
Evi5l
Hmgcs1
Wasf2
Mrpl44
Gas7
Ubl5
Pin1
Fbxl12
Psmb3
Pcgf2
Fchsd2
Pfdn4
Mvk
Mmab
Pou2af1
Cnot3
Trpv4
Tnrc6b
Pan2
Il23a
Pitx3
Gbf1
Nkx2-6
Nuf2
Gm51425
Sh2d5
Tmed4
Ddx56
Fcgr3
Mtmr14
Cct8
Abhd18
1700034I23Rik
Mrpl30
Mitd1
Zcchc14
Pdk2
Hexim2
Tuba1b
Mtch2
Atg16l2
Mdfi
Myh10
Hipk2
Traf2
Polg
Myh9
Luc7l2
Hbp1
Wdr77
Atp5pb
Wdr36
Lars
Slc23a4
Srxn1
Tctn2
Slc14a1
Axl
Slc43a3
Mrps31
Zfp687
Cfap298
Dcps
Lemd1
Dmxl1
Prrt1
Ppt2
Spns2
Zfp386
Hnrnpa2b1
Cbx3
Actr3
Zfp654
Cggbp1
Rab40c
E030030I06Rik
Clca3a2
Prpf40a
Arl6ip6
Fbh1
Ankrd16
Zfp961
Gm6712
Mrpl1
Kdm4a
Arih2
Slc25a20
Arl2
Smim17
Lztfl1
Sphk2
Spaca4
Rpl18
Fam83e
Cyth2
Kcnj14
Prnp
Prn
Frmd6
Cul1
Klhl21
Ube2j2
Zswim4
Tmem94
Wdr25
Wars
Rbm39
Copz1
Canx
Ngdn
Tedc1
Crip1
Spata17
Gpatch2
Sstr3
C1qtnf6
Tle3
Wdr27
1600012H06Rik
Spring1
Rnft2
Fyn
Meltf
Aig1
Rpl19
Cacnb1
Lrriq3
Fpgt
Znhit1
Plod3
Timm17b
Pqbp1
Oaf
Zfyve21
Xrcc3
Ttc14
Ap2a1
Kpnb1
Tut1
Tube1
Fam229b
Wdr81
Tlcd2
Dnajc16
Casp9
Hdac1
Camta1
Cstf2t
Rbm5
Proser1
Nhlrc3
Abhd1
Cgref1
Uvssa
Nfic
Tmcc3
Snrnp200
1810024B03Rik
Tex14
Itgb4
Pex3
Adat2
Mrps23
Tdrkh
Srp19
Calm1
Anapc5
Ss18l1
Psma7
Knl1
Nucb2
Ift140
Cramp1l
Fut10
Opa1
Utp3
Med30
Dcp1a
Scamp1
Mettl25
Ccdc59
Sema3b
Rusc2
Isy1
Rab28
Pcyox1l
Trib1
Sel1l
Pip4p1
Osgep
Apex1
Kansl2
Flywch1
Gstp2
Gstp1
Nap1l4
Zbtb3
Polr2g
Ier5l
Dap3
Tfcp2
Chordc1
Kat6b
Opa3
Ubald1
Mgrn1
Pip4k2b
Lnpep
Rab33b
Ilf2
Npr1
Ddost
Extl1
Styxl1
Mdh2
Slc33a1
Zfp748
Hexa
Ube2a
C330007P06Rik
F13a1
Hip1r
Mphosph10
Mcee
Anp32e
Mtf2
Tom1l2
Drc3
Cnot10
Clasp2
Got1
Zfp101
Kctd9
Cdca2
Ifna13
Mocs3
Dpm1
Spdl1
Meis1
Fam20b
Grin2c
Fdxr
Txnip
Acaa1b
Grk5
Denr
Tspan4
Polr2l
Cd151
Slc29a1
Mymx
Klhdc10
Sdc4
Nbr1
Brca1
Zbtb40
Tnfrsf18
Trir
Get3
Ap1g1
Hspa12a
Nol6
Ergic1
Asmt
Haspin
Sgms2
Lancl2
Mcm3
Trappc9
Bms1
Slc34a3
Fam166a
Tubb4b
Stpg3
Ano8
Gtpbp3
Sirt4
Dhx33
Ctnnd1
Btbd18
Npc2
Isca2
Rps6ka5
Rrp15
Zfp526
Dedd2
Gnas
Dbp
Car11
Cnot11
Tbl1x
Sec1
C1d
Ints10
Dok3
Ddx41
Fosl1
Ccdc85b
Lig4
Abhd13
Gm33887
Pakap
Nlrp10
Eif3f
Pabpn1
Zfp574
Grik5
Psmb2
Aff1
Gprc5b
Ufsp2
1700029J07Rik
Ppp6r3
Hinfp
Syt7
Hexb
Nedd4
Galk2
Cops2
Mthfd1l
Get1
Timm22
Nxn
Leng8
Rac1
Hnrnpr
Hsd17b12
Ndufb3
Fam126b
Mtfp1
Ppp1r11
Znrd1as
Znrd1
Ssbp1
Zfp180
Sh3glb2
Miga2
Nudcd2
Hmmr
Fam149b
Ecd
Uchl1
Rbm27
Cln6
Tob2
Smim12
Ints4
Krr1
Zbtb5
Polr1e
Olfr806
Phkg1
Chchd2
Zbed5
Drg2
Hnrnph2
Gla
Rassf7
Lmntd2
Mthfd2
Mob1a
Msmo1
Serpinh1
Smim38
Bmp5
BC028528
Rab17
Ciart
Erp27
Trim45
Atp6v0c
Amdhd2
Esyt2
Gatad2b
Col2a1
AW549877
Ift22
Qtrt2
Ccdc191
Wdfy2
Trip4
Pclaf
Adnp
Srsf1
Cnot8
Tmem101
Stat3
Tgfbi
Fdft1
Tmem107
Cttnbp2nl
B3gntl1
4930564D02Rik
Elk3
Nsfl1c
Sptlc2
Mfsd13b
Cdr2
Zfp513
Snx17
Eif2b4
Dcaf7
Gpaa1
Exosc4
Retsat
Elmod3
Gpn3
Fam216a
Sgk3
Ccdc88a
Ubiad1
Mtor
Ensa
Rpa2
Ube2f
Nvl
Cnih4
Traf7
Rab26
Tcf3
Anln
9530077C05Rik
Clic4
Zbtb4
Slc35g3
Polr2a
Zfp668
Zfp646
Xab2
Stxbp2
Pet100
Pcp2
Mtg1
Rpp38
Acbd7
Etv5
Gjc3
Synj2
Hnrnpl
Smim22
Rogdi
Sugct
Mplkip
Spsb3
Nubp2
Nme3
Mrps34
Igfals
Eme2
Recql
Golt1b
Tmx2
Med19
Selenoh
Ccdc89
Zdhhc5
Nr1h3
Acp2
Yars
S100pbp
Spink2
Tfg
Lamp1
Kifbp
Zfpl1
Vps51
Tmem262
Cdca5
Tm7sf2
Cluap1
1700037C18Rik
Plekhb1
Cst6
Yipf2
Timm29
Catsper1
Atp5g1
Ap3s2
Nme1
Zfp560
Mre11a
Ankrd49
Faap24
Postn
Kansl3
Fer1l5
Ubald2
Smarcal1
Zfp472
Rpl26
Dffb
Cep104
Rtraf
Fam76b
Cep57
Ddx19b
Aars
Ripk3
Adcy4
Angpt2
Tspyl1
Klhl20
Nfib
Rab4b
Mia
Tmem198b
Dnajc14
Tcam1
Smarcd2
Snrpc
Herc2
Bcas3
Ap3m2
Aspn
Kifap3
Mxd1
Htra2
Dqx1
Cct5
Atpsckmt
Nop14
Grk4
Rasgef1c
Polr3b
Tulp4
Tomm40
Atf7
Chic2
Znhit3
Eipr1
Smg8
Sacm1l
Zfp119b
Ebi3
Yju2
Stat1
Snx22
Zdhhc24
Actn3
Mrpl39
Me1
Slc9b2
Cipc
Ube2s
Psph
Cct6a
Ggct
Trp53rkb
Ogfod1
Nudt21
Nasp
Dcun1d4
Zfp691
Ndufs7
P4hb
Arhgdia
Pigm
Ppip5k2
Gin1
Ercc6l2
Fem1b
Zfp648
Tma16
Septin7
Cox7a2l
Alkbh3
Fos
Mcoln3
Rrbp1
Map3k3
Orai3
Setd1a
Cacybp
Trp53rka
St6galnac6
Kifc5b
Mlf2
Gabpb2
Wdr92
Pno1
Usp22
Nudt13
Il31ra
Slc25a25
Naif1
Ift46
Arcn1
Gid8
Dido1
Drosha
6030458C11Rik
Ptrhd1
Cenpo
Lama4
Ect2
Rheb
Zswim3
Acot8
Akap8l
Uvrag
Ticrr
Ncam1
Emp1
Atp8a1
Dnajc24
Ccdc57
Creb5
Dnajb5
Cfap20
Chmp5
Bag1
Gal3st3
Sf3b2
Cyp2u1
Ablim1
Syce1l
Mon1b
Ttc26
Cnpy3