ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX15046886 | MEF
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◣ SRX15046886: MEF

◢ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◢ SRX15441805: Unclassified

◢ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

Txndc11
Rnf44
Cdhr2
Tcstv3
Aard
Oprd1
Gm3739
Galnt9
Vasp
Ppm1n
Rtn2
Dab1
Cldn34d
Adamts19
Pde3a
Mmp15
Galr3
Gm5165
Adcyap1r1
Wnt10a
Plvap
Reep4
Hr
Dpysl4
Lrrc3b
Ccdc3
Garem2
3110082J24Rik
Tpbgl
C2cd4b
Prkcz
Rftn1
Vtn
Sarm1
Arrdc4
Yif1b
Kcnk6
Plekha7
P2ry1
Ampd3
Bmp2
Nt5c2
Ina
Adcy8
Celsr1
Mad2l2
Draxin
Prtg
Bmp7
Gm2237
Cnnm3
Ccdc85c
Adamts15
Igfbpl1
A830018L16Rik
Ier5l
Lrrn4
Reln
Ascl2
Srm
Tjp3
Pip5k1c
Plxnd1
Cabp7
Trarg1
Bhlha9
Adcy9
Kcnk12
Ubd
Olfr94
Cnnm1
Ret
Synm
Efcc1
1810020O05Rik
Pm20d2
Insyn1
St6galnac2
1700001C19Rik
Guca1a
Prkcq
G3bp1
Atox1
Sharpin
Maf1
Cyc1
Gm35339
Sema3f
Gxylt2
Gjd3
Gatad2a
Syt10
Gm3411
Homer2
Emb
Gcnt1
Vps13c
C2cd4a
Rapgef5
Fgfbp3
Btaf1
Trnp1
Kcnq4
Kcns2
Gda
Tcea2
Sox18
Fam189a1
Mroh5
Gm6569
Shisa9
Adcy3
Slc22a3
Gfra4
Kbtbd13
Rasl12
Gm3752
H3c15
H3c14
H2ac19
H2ac18
Btbd11
Pakap
Prima1
Pax4
Fdft1
Zfp143
Ptf1a
Pax3
Plag1
Kctd1
Htra4
Tmem179
Ak5
Fnbp1
Gipc1
Usp13
Dact2
Jpt2
Tarbp1
Nkx1-2
Rhbdl3
Oxr1
Kcnh1
Zmiz1
Tpcn1
Iqcd
Zfyve28
Cfap99
Dock8
Igdcc3
Nkd2
Olig1
Rnf165
Igfbp5
Wnt3a
Gbx2
Fam53c
Cdc25c
Osbp
Fbn2
Calm3
Irx4
Zbtb16
Kctd12
Slit3
Prkaca
Kmt2a
Dipk1c
Sall4
Ptger3
Slc35f3
Adamts2
Foxi3
Nrg2
Spsb3
Nubp2
Nme3
Mrps34
Igfals
Eme2
Slc24a2
Stum
Tmem132b
Car15
Fgfr1
Shisa8
Gm5796
Adrb1
Dusp2
Astl
Wnt3
Egr2
Ado
Ffar4
Tmem200c
Ap2a1
Lrrn2
Rerg
Unc5a
Kcnip3
Nae1
Car7
Gm3500
Ephb1
Cdh4
Xpc
Lsm3
Eya2
Rgs9bp
Ankrd27
Ntsr2
Gm10406
Col27a1
Qrfpr
Zfp593
Gm30191
Grrp1
B3gat1
Rasef
Phpt1
Mamdc4
Ajm1
Gm3488
Pcdh1
Jph3
Nefl
Gabra5
Sptbn4
B3gnt7
Atp1a3
Gm3667
Shc2
Odf3l2
Slc6a17
Adcy1
1700067K01Rik
Misp3
Palm3
Hs3st4
Unc5b
Enox1
Paip2b
Sorcs1
Zfp869
Tepsin
Ndufaf8
Dlk1
Scn1b
Galnt13
Ppp2r5a
Tppp
Stox1
St6gal2
Tcf19
Pou5f1
Cchcr1
Gse1
Kcnma1
Fam43b
Pax6
Rasgrf2
Stip1
Ankrd54
Ttc9
Fzd10
Ednrb
N4bp2l1
B4galt6
Gldn
Col19a1
Cnot3
Ankrd34b
Foxe3
Vangl1
Kcnb2
Rpn2
Mroh8
Sp2
Gm38538
Cby3
Gja3
Tmie
Als2cl
Tbl1xr1
Tmem158
Atp1b1
Lonrf2
Hmgcs1
Hmgn1
Dhh
Traf2
Wnt4
Aktip
Reep1
Flt3
Gsg1l
Shisa2
Dynlt1b
Adamtsl3
Kif7
Kcnq3
Spint1
Ppp1r14d
Abhd2
Dmrt2
Qrfprl
Tmem121
Gng13
Chtf18
Adgrb1
Dach1
Mafa
Grid1
Gm3696
Insm2
Dock10
Samd4b
Gmfg
Irx2
Adarb1
Ush1g
Otop2
S1pr5
Keap1
Nsg1
Hyou1
Pkp1
Brox
Aida
Atoh8
Adrb3
Ngf
Fam78b
Lrrc75b
Ggt1
Cul2
Gdf7
Cacnb2
Acan
Aplp2
Lysmd2
Aph1c
Foxs1
Hhipl1
Slc24a4
Adora1
Dusp15
Rrbp1
Ky
1190005I06Rik
Rab11fip4
Htra3
Gas1
E030030I06Rik
Sigmar1
Arid3c
Dctn3
Trappc6a
Bloc1s3
Kndc1
Zfp385b
Ebf4
Prex2
Efhd1
Zfp654
Cggbp1
Smoc2
Colgalt2
Lrrc10b
Shh
Fut9
Kank4
2810459M11Rik
Cdh23
Chst3
Sost
Tnnc2
Ube2c
St8sia1
Cacna2d2
Pde1b
Xylt1
Grin3b
Ube2b
Cdkl3
C130074G19Rik
Onecut3
Skor1
Kit
Igfbp3
Pmp22
Rnf144b
Sema5b
Gm3383
Lurap1l
Tmem30b
Kank1
Zbtb7c
Fam163b
Islr2
Tbx20
Atp5g1
Wnt5b
Gpr27
Cyp46a1
Sdk2
Psd
Fbxl15
Kcns1
Fzd2
Pygo1
Prph
Dgka
Pym1
Pdlim1
Vax1
Cnnm2
Gm3636
Smim12
Drd5
Rims4
Gpr84
Olig2
Ctnnd2
Svep1
Plxnc1
Lypd6
Erich1
Dlgap2
Fbln7
Syndig1
Arid4a
Rnf125
Atp8b1
H1f10
Ghsr
Ttc41
Hsp90b1
Kcna7
Ntf5
Tbx21
Pdik1l
Gjc2
Ripply2
Cyb5r4
Nol4l
Insyn2a
Snx20
Zdhhc20
Plekho2
Pif1
Sstr1
Prdm13
Cnr1
Srek1ip1
Cwc27
Clip4
Dgcr8
Wscd1
Wnt1
Col13a1
Sertm1
Klf10
Xcr1
Fyco1
Tgfa
Tnfrsf21
Neurod2
Nfatc2ip
Galnt16
Npas1
Recql
Golt1b
Pdzrn3
Trim71
Abtb2
Cftr
Deptor
Dolpp1
Pigq
Nhlrc4
A930017K11Rik
Rap1gap2
Itga4
Tmem178
Susd1
Lama1
Sap130
Ensa
Dennd5b
Vps26a
Cdkn3
Cpm
Camk2b
Man1c1
Ptprt
Ncapd2
Mrpl51
Smtnl2
Tfdp1
Gm20346
Anp32a
Helt
Arpp21
Ppic
Nmbr
Htr1b
Hmx1
Ska2
Prr11
Sun1
Mxd4
Slc22a23
Ppp2r2c
Mvk
Mmab
Sptbn2
Slc43a1
Tmem210
Lrrc26
Bves
Trappc9
Mmd
Bhlhe23
Ift27
Slc39a4
Gm51425
Cpsf1
Map3k5
Lrrfip1
Bmper
Zfp853
Ankhd1
Chadl
Tldc2
Soga1
Mei1
Mxd1
Snrpd2
Qpctl
Pla2g6
Mfsd13a
Kl
Wnt7a
Prtn3
Plppr3
Efnb2
Dpf3
Stx16
Maea
Rassf10
Jakmip1
Trpm4
Hrc
Cbln4
Cdca7l
Setx
Zfp879
Grm6
Eva1a
H60b
Nav2
Kcnq1
Tmem215
Flcn
Nptxr
Rfx2
Kpnb1
Hsd11b2
Gabbr2
Nemp1
Fam83d
Ccdc177
Ubald2
Zfp960
Npc2
Isca2
Trim47
Tmtc4
Pde8b
Kri1
Cdkn2d
Fbxo41
Egr4
Mto1
Cgas
Plxna2
Calhm6
Ap3m2
Rps6ka5
Baiap2
Rai1
Far1
Wnt2
Tnrc6b
Ascl4
Pitpnm1
Cdk2ap2
Klf11
Vav3
Slc30a10
Nt5e
Fbrsl1
Nrxn2
Kcnk15
Wasf1
Cdc40
P2rx5
Plekhd1
Ptbp1
Mapt
Sst
Hdac9
Lhx3
Vps26b
Ncapd3
Ube2ql1
Adamts18
Rbm28
Prrt4
Proser2
Mreg
Pou3f1
Iqsec3
Tmem129
Tacc3
Slbp
Dsg2
Creb3l2
Slc2a13
Ednra
Clec2l
Gm7244
Prdm10
Gimap1
Gimap5
Kbtbd11
Fgf3
Ppm1b
Clmp
Sertad2
C2cd2
Spry1
E2f1
Dtna
Kcnq2
Klhl40
Plcb1
Rcor2
Herc2
Fcgr3
Dcaf11
Pcbp3
Panx1
Asap1
Rgs7bp
Dll1
Tril
Neurod6
Dlgap4
Rtn4rl1
Dph1
Lingo1
Mex3c
Limk1
Spsb4
1110032F04Rik
Rab22a
Nr2e1
Ebf1
Megf11
C1ql1
Sfrp5
Gm10499
Kdm4b
Atxn3
Atoh7
Aldh1a3
Nrp1
Zbtb46
Myo1b
Htr6
Tjp2
Astn2
Hdac2
Sorbs1
Egr3
Fam163a
Ltbp4
Nkpd1
Hcn4
Col15a1
Usp12
Atg9b
Abcb8
Gpr88
Adra2c
Ptov1
Mpv17l
Zfand1
Cirbp
Wasf2
Myh9
Dynll1
Rpl22
Rnf207
Akap8l
Lingo2
Ppp1r26
Pou3f2
Stat3
Rab4b
Mia
Cebpd
Abcc8
Cspg5
Gdnf
Ptpn14
Sgk3
Fam76a
Dnpep
Mtch1
Tfcp2
Rab31
Chn2
Pdzd2
Kcnj12
Rax
Psip1
Srbd1
Icmt
Hes3
Iffo2
Kcnk3
Nkx1-1
Cep192
Gpr142
Acot3
Btbd17
Nlk
Grk6
Alx4
Cntn5
Tom1
Olfm1
Pard3
Zfp800
Kcnk10
Phyhipl
Rpgrip1
Hnrnpc
Fam174c
Zfyve21
Xrcc3
Adamts9
Efna2
Dact1
Atp10a
Rnf144a
Slc26a4
Fam43a
Nes
Ap1b1
Nefh
Foxb1
Arsi
Tuft1
Slc16a14
Lingo3
Man2a1
Mme
Eya1
Wnt9b
Lamb1
Lsg1
Wiz
Trim45
Maneal
Dok7
Klf14
Rasal3
Cyp26a1
Sp1
Mtch2
Dnajb1
Shisal1
Vamp2
Per1
Tspear
Lbr
Crhr2
Lmo1
D430041D05Rik
Srpr
Foxred1
Ebag9
Tfap2c
Wnk2
Hmox2
Nmral1
Bcl10
Megf6
Tprgl
6430628N08Rik
Piezo2
Foxf1
Gfra2
Sash1
Top2a
Nkx3-2
Rbm27
Ticrr
Endod1
Prmt8
Kcnn2
Syt12
Svbp
Ermap
Cck
Ica1l
Slc47a1
Msx3
Cd34
Rnf5
Agpat1
Prkg2
Map6d1
Gpr25
Ndst2
Sema4d
Atxn7l3
Lypd1
Alkal2
Grin2c
Fdxr
Ift140
Cramp1l
Kmt5a
Tmem51
Sema6d
Paqr9
Pdzrn4
Rpusd1
Mslnl
Fam76b
Cep57
Tpst2
Septin11
Tef
Tafa5
Slc4a11
Pou3f3
Hcn2
Dync1h1
Fem1a
Ism1
Sv2c
Cnot1
Amz2
Nucb2
Popdc3
Camk2n2
Tet2
Rbms1
Klhl23
Ece2
Frmd4b
Pkd1
Sstr2
St8sia2
Greb1
Cd209a
Ss18
Mtmr14
Mrpl21
Ighmbp2
Nabp1
Cap1
Ggct
Lrif1
Clmn
Ivd
Gpr155
Pced1b
Amigo2
Myh10
Zbtb5
Polr1e
Pkd1l3
Dhodh
Adcy2
Bhlhe22
Lhx2
She
Nkx2-6
Sh3bp5
Mfhas1
Otp
Adamts8
Tle1
Msc
C2cd4d
Rorc
Dmrta1
Pdgfb
Myrip
Ppm1l
Eef2
Fbxo24
Lrch4
Dffb
Cep104
Pias4
Tfap2a
Cxxc5
Tpmt
Kdm1b
Shroom3
Csmd1
Abcc9
Zfat
Oxld1
Hgs
Ccdc137
Arl16
Slc1a2
Cdk5rap3
Tacstd2
Polr3h
Pwwp3a
Jakmip3
Gsx1
Pip4p1
Osgep
Apex1
Rab40c
Trim65
Mrpl38
Fzd5
Cited1
Il1rapl2
Rmnd5a
Fzr1
Dohh
Slc35e2
Frat2
Dipk2a
Ryr3
Grm5
Cyp2u1
Pdxp
Mboat2
Qdpr
Clrn2
Fmnl1
Ryr2
Kcnc1
Bcl6
Tom1l2
Drc3
Fmnl3
Acvr2b
Ntn1
Slc35f2
Kcnc4
Adap1
Cenpu
Rab11b
Stk32c
Gpc1
Ccne1
Slc47a2
Ksr2
Tmem260
Rab5b
Pmel
Cdk2
Insig1
Sqle
Camk2n1
Tcf15
Rusc2
Cyld
Sfxn2
Arl3
Rtn4r
Twist2
Vgll2
Ppp1r16b
Fgfr2
Ubr5
Arf2
G3bp2
Uso1
Natd1
Col18a1
Tmtc1
Cnpy1
B4galnt3