ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX12142051 | mESCs, differentiated
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◢ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◢ SRX7546913: ES cells

◢ SRX7546914: ES cells

◢ SRX823607: ES cells

◢ SRX12142046: mESCs, differentiated

◣ SRX12142051: mESCs, differentiated

◢ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◢ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Cldn34d
Alg14
Tcstv3
Gatad2a
Gata4
Fgf5
Ufsp1
Slc7a7
Tox3
Ncor2
Atrn
Hes7
Sh2d5
Cd38
Sp5
Slc25a17
Eno1
Hsd11b2
Tfpi
Smc6
Gen1
Wrap53
Trp53
Brox
Aida
Pabpc1
Pbk
Znrf1
Epha1
Lhx1
Donson
Colec12
Gdap1l1
Mphosph8
Zfp964
Spdef
Rffl
Letmd1
Ncs1
Slc25a4
Ifitm1
Tmem121
Gid4
Pitx3
Gbf1
Med4
Ywhae
Ints9
Hmbox1
Pigv
Zfp9
Tbc1d5
Fam107a
Nudt9
Acp5
Vrtn
Mapk3
Man2a2
Rnf220
Trabd
Mdm4
Cfc1
Igsf23
Rbm47
Foxa2
Mrc1
E030030I06Rik
Wbp4
Elf1
Ddx20
Zfp267
Kctd9
Cdca2
Spry2
Schip1
Itm2b
Cdhr1
Inha
Obsl1
Faim
Frzb
Rps6ka3
Zfp629
Mycl
Pacsin2
Polr2h
Cul5
Fbxl7
Fbxo5
Spata24
Atp1a2
Ubtf
B3gnt7
Sbk1
Tenm4
Car14
Chd1
Sema6a
Nkiras2
Dnajc7
Mrpl23
Grrp1
Emb
Chrna9
Mab21l1
Mllt10
Glul
Cep55
Fzd8
Prdm4
Msc
Asxl1
Gbx2
Abi2
Klrb1b
Apbb2
Ror1
Setd5
Ppp1r16a
Foxh1
Coq2
Rtkn
Zcrb1
Pphln1
Slc12a4
Tmem229a
Rbm24
Apc
Slc6a16
Cd37
Lama1
Tmc7
Kif13b
Ypel2
Arfgef1
C4bp
Oga
Ptch2
Vezt
Fgd6
Polg2
Neurog3
H2-T-ps
Grb2
Dpp10
Exoc6b
Zdhhc6
Vti1a
Pef1
Sfxn2
Arl3
Rtl8c
Tmco4
3300002I08Rik
Adgra2
Cer1
Tanc1
Irgm2
Enpp4
Notch2
Zfp975
Mbp
Casz1
Wdr54
1700003E16Rik
Mapre2
Slc26a8
Mapk14
Ptprz1
Chst15
Itpkc
Coq8b
Tmed7
Eif1a
Cep70
Atxn3
Klf5
Tas2r109
Gm9639
Gm19668
Dact2
Ppp2r5b
Rnf125
Abl1
Efcc1
Rps6ka5
Ccdc30
Mogat2
Zswim7
Ttc19
Qpct
Rassf4
Arl2
Lhx8
Tbc1d9
Macroh2a2
Fam227b
Dtwd1
Omp
Ndufaf4
Zfp442
Lama5
Ednrb
Wipi2
Zfp978
Ddah2
Pdcd2
Dnaaf3
Klhl1
Kdm4a
Tprn
Nudt1
Col13a1
Phc2
Golm2
Olfr813
Zfp937
Mesp1
Phlpp2
Zfp936
Arap2
Fgf6
Nat8f5
Rtn4rl1
Dph1
Gm9736
Olfr461
Tbc1d10b
Mylpf
Hmga1b
Hmga1
Hook2
Gm3250
Stc2
Prelid3a
Tdrd3
Slco4c1
Tmem119
Adnp2
Cachd1
Slc37a3
Rab19
Zbtb22
Tapbp
Svip
Foxp1
Lmo7
Anks6
Pou2f1
Rbpjl
Matn4
Rin3
Mkx
Ptpra
Mterf1b
Msh6
Tsc22d3
Ncbp3
Prcc
Zfp976
Gm4861
Pdia3
Catsper2
Rasgrp3
Pdlim2
Tsga10
Inf2
D3Ertd751e
Mycn
G2e3
P3h2
Slc35g2
Mterf1a
Olfr1109
Lrrc8d
Tgfbr3
H1f2
Sh3rf1
Itgb3
Ndrg1
Lsm14b
Fam110c
Rbms1
Tada1
Klf6
Sprr2a3
Sptb
Rheb
Pde3a
Helt
Kdm2b
Tdgf1
Lrrc2
Mbd3
Pik3cd
Olfr368
Hcfc2
Mpped2
Ralb
Ephx2
Disp1
Setd1b
Fnta
Snrnp70
Cox5a
Nrp2
Cort
Wsb2
Marchf7
Coro2a
Syne3
Ost4
Hnrnpr
Zkscan6
Grid2ip
Tmem121b
Trim36
Zeb2
Rtl8b
Gdpgp1
Cib1
Chrac1
Prickle1
Cfap300
Ugt1a9
Gm10318
4930474N05Rik
Dmtn
Tmem63b
Mrpl14
Spink2
Pgrmc2
Ssh1
Nostrin
Mios
Nmnat3
Flrt2
Ppp6r1
Per2
Pms1
Ormdl1
Ncdn
AU040320
Zbtb25
Zbtb1
Ncoa1
Rmi1
Hnrnpk
Shoc2
Bbip1
Wdr59
Tmem131l
Dbh
Flacc1
Serpina12
Tmem62
Tmem181a
Ppp2ca
Asap1
Duxbl3
Duxbl2
Duxbl1
Mnx1
Cacng2
Sprr2a2
Sprr2a1
Gm9507
Gm2696
Abl2
Ppp2r3a
Dnajc10
Ccdc33
Stk32a
Hivep2
Mov10
Slc9a3
Tmem59l
Crlf1
Pmaip1
Slc16a9
Usp13
Tmub1
Fastk
Bmp7
Agfg1
Tgfbr1
Gm10100
Mthfd2l
Cx3cl1
Psmb10
Ctrl
Pnrc1
Rpp14
Htd2
Pcif1
Gpsm2
Selenbp1
Pear1
Marcks
Mapk8
Tagln3
R3hdm2
Bcl10
Kcnn2
Actn1
Zfyve1
Trmt1
Nacc1
Flywch1
2300009A05Rik
Fn1
Cgrrf1
Zhx1
Arid3c
Fkbp14
Mrps23
Ppat
Paics
Epb41l2
Crot
Irgm1
Asap2
Olfr1028
Malt1
Prkag1
Coil
Slc25a22
Rnf8
Rbm45
Atp1b2
Ndst1
Rmnd5b
D5Ertd579e
Zfp62
App
Naa16
Zkscan5
Zkscan14
Fads1
Prex1
Cnn3
Pald1
Ptch1
Tcf7l1
Slc26a7
Usp37
Cnot9
Wdr61
Dennd1a
Npm3
Fgf8
Gfra3
Zfp36l2
Got2
Grasp
Vrk1
Prmt9
Clcn4
Mtfp1
T2
Strn3
Ap4s1
Chid1
Atoh8
Ablim1
Smad7
Zfp868
Kif5c
Slc39a4
Kank2
Appl2
Eomes
Slc27a6
Lypla1
Snx17
Eif2b4
Rest
5730409E04Rik
Tab1
Gp1ba
Smyd4
Rpa1
Ppp1r15a
Plekha4
Tle4
Reep2
Slc13a2
Jakmip1
Nbea
Speg
Dusp5
Pelp1
C1ql1
Aktip
Gm5622
Cxxc5
Pdpn
Triobp
Mesp2
Kcnab3
Trappc1
Cntrob
Ppm1a
Syde2
Pum1
Pdxdc1
Mpv17l
Mreg
Setdb2
Gm45935
Cab39l
Grin2c
Acta1
Serhl
Crocc
Gm3233
Ttc21b
Mpc1
Smad4
Slc22a6
Pvr
Fstl1
Mcrs1
Rhof
Zfp64
Exd2
Eif4e
Olfr1229
Garre1
Cd24a
Snn
H3f3a
Dctn4
Pxdc1
Hnrnpa2b1
Cbx3
Igfbpl1
Npc1
Lsmem2
Zfp36
Ap2m1
Trak1
Casc3
Serinc1
Nphp3
Cerkl
Tmem184a
Tnc
Mapk4
Kcna2
Rab11fip1
Gna13
Mtap
Terf2
Fscn1
Brinp1
Liph
Slco5a1
Aplnr
Arhgap30
Ypel1
Syne1
Speer4f1
Axl
Gbp2
Lzts2
Cd63
Mafg
Togaram1
Klhl28
Bcl7b
H2az2
Nkx2-5
Poll
Dpcd
Slc25a47
Slc10a7
Rbmxl1
Mamstr
Trim68
Dcaf11
Pdp2
Slc66a2
Plcb4
Gpr179
C2cd2
Tulp4
Srpr
Foxred1
Igf2bp3
Mmp15
Hoxa2
Tmem161a
Numa1
Slc22a23
Usp36
Rrm2
Gcnt4
Srrm4
Sphkap
Rprd2
Kcnj4
Cand2
Cdkn1b
Gfi1
Lgmn
Znhit2
Mrpl49
Fau
Proser2
Rcsd1
P3h1
AU022252
Mllt1
Fgfr2
Scrt2
Krtap10-4
Tnni1
Tpm1
Hs3st3a1
Slc4a5
Sulf1
Fibcd1
Zc3h12c
Abr
Lrrc38
B3gnt2
Phldb1
Glipr1l3
Caps2
Sms
Nat8
Cdkl2
Tle2
Trim62
Hif3a
Smap2
Abca8b
Gsx1
Spg20
Pde6d
Cops7b
Cebpe
Ccn2
Trerf1
Rgs12
Csnk2a1
Rab37
Raph1
Rmdn1
Cpne3
Dner
Setx
Agtrap
Zfp319
Usb1
Sugt1
Cacng7
Gm8439
Loxl3
Dok1
Socs5
Slc38a8
Cyyr1
Pcbp2
Exosc6
Gdnf
Snrpn
Tspan12
Trim33
S1pr5
Efna3
B4galt7
Adam19
Srd5a3
Bsg
Neil1
Eif4g2
Serpini1
Pdcd10
Cep63
Anapc13
Marchf2
Mycbp2
Pth1r
Soga3
Mob4
Hes1
Sp4
Rhob
Ackr3
Trip12
Fbxo36
Tef
Epm2a
Sec22b
Tmeff1
Adam22
Cand1
Slc5a6
Atraid
Ndfip2
Set
Usp10
Fut4
Pik3r3
Klhdc8b
Ccdc71
Zfp787
Septin2
Hdlbp
Tead3
Erc1
Htr2a
Spred1
Adprh
Dll3
Espn
Tle6
Ccnd1
Spint1
Slc12a2
Abhd18
Mmp25
Sec22c
Mad2l2
Draxin
Cela2a
Hoxb13
Nfatc3
Gm17660
Nvl
Cnih4
Hipk2
Gimap3
Clasp1
Ptk7
Nsrp1
Rtcb
Prmt8
Susd1
Tmem42
Sall4
Hoxb1
Prkar1a
Suz12
Ctf1
Bcl7c
Phf10
Slc40a1
Gm3285
Efemp1
Tchh
Tecr
Csrp2
Arhgap32
Fam90a1b
Apoo
Cltc
Plekhh1
Dmrtb1
Psd
Fbxl15
Ehmt2
Zbtb12
Klf4
Serpina5
Gtf3c4
Ddx31
Spop
Prom1
Scrn3
Cir1
Cpt1a
Msh5
Clic1
Pkm
Prss30
Ccdc66
Cxxc4
Mical1
Lefty1
Tcf7l2
Cd47
Ap1g2
Pdgfra
Zfp982
Slc4a2
Cdk5
Rrp1b
Hsf2bp
Smarca1
Mob1a
Pdzd2
Cpb1
Gm4925
Arl1
Prdm10
Herc1
Slc14a1
Cspp1
Cops5
Slc25a44
Clip4
Pyurf
Pdrg1
Plaat3
Asah2
Slc46a3
Epha4
Col5a1
Slain2
Utp15
Ankra2
Atp6v1c2
Afg1l
Gpr108
Trip10
Stra6l
Sun1
Usp32
Svs1
Gm14137
Parp6
Tctex1d1
Plk3
Tha1
Nynrin
Ate1
Shroom3
Strap
Timm44
Smarce1
Krba1
Ube2d1
Soat1
Phf12
Scd1
Ltc4s
Atg5
Napepld
Lamb1
Tnf
Lef1
Lta
Kctd14
Srgn
H2bc6
H1f4
Gm2237
Cuedc1
C77080
Dsp
Tbc1d4
Slc31a1
Fkbp15
Ubl3
Hoxc13
Flnc
Dab2ip
Ntng1
Cd160
Clic4
Samd4
B4galt1
Adnp
Slc35d1
Slc19a1
Hrg
Meaf6
Pcdh8
Fahd2a
Ssbp2
Fam178b
Cnbp
Cdh1
AI413582
Akt2
Camkv
Ssbp3
Tigd4
Zfp91
Lpxn
Afap1l2
Smtn
Stx11
Rab4a
Plekha2
Gne
Wnt3
Ppp1r8
Snx15
Dusp10
1700056E22Rik
Hdac1
Gna14
Naaa
Zfat
Fignl1
Ssbp4
Ptdss2
Lpar2
Adgrb3
Csrp1
Hr
Crx
Shc1
Cks1b
Bag3
Myo1e
Ndufb4
H3c15
H3c14
H2ac19
H2ac18
Jpt1
Ptdss1
Mterf3
Ezh1
Vpreb1
Top3b
Gapvd1
Jakmip3
Percc1
Immp2l
Six2
Usp35
Kctd21
Dpf3
Orai3
Bcl3
Col4a2
Col4a1
Prrc2b
Pdpr
Coa4
Dusp4
H3c13
H2bc18
Ppp3cb
Nectin2
Rnf103
Zmynd8
Ctbp2
Slc6a9
Slc1a2
Stat2
Apof
Nt5c3
Sowahc
Septin10
Ddit4
Mea1
Klhdc3
Cdkn2aip
Inafm2
Magi1
Ccdc9
Spaca6
Vwa3a
Fam136a
Zyg11b
Dbx2
Meis3
Tcte2
Afdn
Cntnap2
Mtfr1l
AI661453
1700001C19Rik
Lamb3
Ptpn3
Kcnc1
Msra
Tlnrd1
Mesd
Zbtb7b
Ptpn14
Ccpg1os
Ccpg1
Cfap20dc
Hapln4
Ghitm
Ush2a
Mgat1
Dlc1
Sdc1
Ipo8
Pdlim3
Dhx32
Atp11b
Klhl13
Nkap
Sfn
Fitm2
Spata13
Mup4
Msl1
Otud4
Fancc