ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7546914 | ES cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◢ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◢ SRX7546913: ES cells

◣ SRX7546914: ES cells

◢ SRX823607: ES cells

◢ SRX12142046: mESCs, differentiated

◢ SRX12142051: mESCs, differentiated

◢ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◢ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Alg14
Znrf1
Slc25a4
Pabpc1
Wrap53
Trp53
Letmd1
Mup4
Slc15a1
Wsb2
Cldn34d
Gatad2a
Setd5
Prdm4
Vezt
Fgd6
Ncdn
AU040320
Acp5
Gja1
Zcrb1
Pphln1
Slc6a16
Cd37
Asxl1
Eno1
Tmem181a
Rheb
Oga
Trim72
Cd38
Mphosph8
Atrn
Kif17
Spata24
Lama1
Prkag1
Gid4
Apbb2
Man2a2
Colec12
Coro2a
Nphp3
Pacsin2
Wdr59
Dhx32
Rassf8
Setd1b
Terf2
D630039A03Rik
Sfxn2
Arl3
Mbd3
H3f3a
Exoc6b
Zfp964
Smc6
Gen1
Rragc
Defb46
Atxn3
Ywhae
Mios
Tagln3
Hnrnpdl
Enoph1
Ddah2
Tmed7
Eif1a
Ubr5
Tulp4
Arfgef1
Lifr
Ufsp1
Donson
Rif1
Dynll2
Abl1
B3gnt7
Fahd2a
Alg13
Lypla1
Abcc4
Radil
Gm4861
Stmn1
Slc7a7
Prelid3a
Hoxb13
Prnp
Prn
Bcl10
Tmem62
Dnttip2
Myo10
Klf5
Rnf125
Slc37a3
Rab19
Ptprz1
Lrrc8b
D5Ertd579e
Rybp
Hoxa2
Tcstv3
Ift140
Cramp1l
Notch2
Flywch1
Polg2
Ddx20
Ccdc30
Qpct
Togaram1
Klhl28
Mllt1
Slc9a3r1
G2e3
Brox
Aida
Arl2
Tmem131l
Adnp2
Zfp978
Ndrg1
B3gnt4
Atg5
Dhrs7b
Adgra2
Pef1
Chd1
Zscan10
Zfp13
Slc26a8
Mapk14
Med12l
Prkar1a
Rpp14
Htd2
Mrps15
Mycn
Parp6
H1f2
Tdrd3
Hic1
Apc
Slc25a22
Lax1
Sptb
Spef1
Cenpb
Tprn
Sbk1
Pvr
Col26a1
Ptch2
Zfand6
Gne
Parp12
Shoc2
Bbip1
D030056L22Rik
Ptpra
Tfeb
Vrk1
Tbc1d9
Coq2
Rab4a
Snx15
Tbc1d5
Pcgf1
Gsx1
Dnmt3a
Ppp2r3a
Trappc5
Fcor
Mab21l1
Sbk2
Usp37
Cnot9
App
Cdkn2aip
Soga3
Mllt6
Snn
Agtrap
Ptger1
Slc31a1
Fkbp15
Cmas
R3hdm2
Mreg
Smad6
Rnf122
Dcaf11
Chrac1
Cd300lg
Zfp9
Sh3rf1
Pdp2
Nodal
Ppp2ca
Pcif1
Unc5b
Zdhhc2
Fbrsl1
Enpp4
Zfp532
Zdhhc6
Vti1a
Rest
Ccdc9
Serpini1
Pdcd10
Rps10
Kcnj4
D3Ertd751e
Fbxo5
Nefh
Ap1b1
Cds1
Hsdl1
Dnaaf1
Mrpl23
Prrc2b
Ralb
Hmgxb4
Glra1
Tmco4
Grb2
Cep70
Ccn2
Mea1
Klhdc3
Cbll1
Dgkd
Fam136a
Ubc
Zbtb45
Znfx1
Pdcd2
Wbp11
BC049715
Lpgat1
Trmt61a
AI413582
Coa4
Tmem170b
Cdc16
Mterf1a
Asap2
Golm2
Spag4
Isl1
Abl2
Zhx1
Ifitm7
Bmerb1
Fam227b
Dtwd1
Scaf11
Gdap1
Usp5
Cdca3
Epha4
Slc12a4
Zfp36
Tmeff1
Ido1
Dyrk4
Gzme
H2az2
Aldh5a1
Snx17
Eif2b4
Mib2
Cldn14
Racgap1
Il17rd
Ints9
Hmbox1
Cecr2
Lsmem2
Fubp3
Slc16a9
Umad1
Rpa3
Pxdc1
Rabggta
Ap1g2
Klhdc8b
Ccdc71
Max
Mtfr1l
Chid1
Actr10
Jade2
Ror1
Phyhipl
Plcxd1
A630095N17Rik
Znhit2
Mrpl49
Fau
Faim
Rtcb
Lgmn
Exd2
Mt1
Camkk1
Slc17a5
Ndrg4
Pitpnm1
Cdk2ap2
Timm44
Phf12
Ptms
Tsga10
Smyd4
Rpa1
2210016F16Rik
Zfp868
Spast
Itm2b
Flrt2
Nadsyn1
Dhcr7
Smad7
Cep192
Mturn
Plekha7
Cox8b
Pdlim5
Arid3c
Arhgap32
Slc25a1
Zbtb8a
Rap2a
Coil
Marchf7
Pmaip1
Hcfc2
Slc35f2
Dpf3
Arhgap19
Mapkapk5
Cdkl2
Picalm
Chn1
Csn1s2a
Atp2c2
Steap3
Etv6
P3h1
AU022252
Gmeb2
Ms4a10
Pygo2
Tcea3
Slco5a1
Castor1
Hspb1
Ccdc60
Zfp982
Vdac3
4930474N05Rik
Slc4a2
Cdk5
Poll
Dpcd
Socs2
Cep63
Anapc13
Ryr2
Tvp23a
Olfr1034
Smad4
Hipk2
Cerkl
Mterf1b
C1ql1
Pitx3
Gbf1
Klhl13
Fignl2
Ankle2
Pdha1
Fam118a
Tent5c
Tmem235
Cdc45
Pnrc1
Pus3
Ddx25
Hes3
Cit
Fbxl7
Cspp1
Cops5
Mettl9
Rbm47
Caprin1
Trabd
Hnrnpa2b1
Cbx3
Mamstr
Clasp2
Ppp1ccb
Ppp1cc
Pik3r3
Mafg
Wiz
Tmtc4
Midn
Nfix
Ttc9b
Fam161a
Slc12a2
T2
Rnf103
Pdia3
Catsper2
Ttc21b
Tpst2
Cep112
Gjc1
Sp2
Nr2f6
Mnx1
Kctd6
Oplah
Ube2d1
Akt2
Hdac1
Tdp2
Acot13
Glra3
E030030I06Rik
Lrrn2
Ust
Rpp38
Acbd7
Cul5
Pdrg1
Cds2
Foxd2
Rpp40
Recql4
Lrrc14
Kcnt1
Arf2
Gli2
Arhgap42
Msh6
B3gnt2
Zbtb25
Zbtb1
B4galt2
Atp6v0b
Slc22a17
Nkiras2
Dnajc7
Lrrc8e
Fads1
Lama5
Mkrn2
Irgm1
Ttc28
Slc22a23
Zbtb34
Yod1
Pfkfb2
Hgh1
Gna13
Psd
Fbxl15
Ltc4s
Trh
Slc13a2
Pex5
Rmnd5b
Pgrmc2
Klhl2
Abcc1
Cacng2
Lrrn4
Fndc3b
Unk
Dab1
Txndc12
Btf3l4
Pxk
H3c15
H3c14
H2ac19
H2ac18
Cfl1
Csnk2a2
Ptch1
Cluh
Rcc2
Vstm2l
Ap2m1
Ntng1
Slc5a1
Kcnq3
Nup85
Hey1
Denr
Ephb3
Setdb2
Gm45935
Cab39l
Atad3a
Tbl1xr1
Ctif
Ckb
Klf1
Cpsf4l
Tmem42
Actl6b
Ppfia1
Enah
Stk38
Timm9
2700049A03Rik
Lrrc8d
Trim7
Nfyb
Rad51ap1
D6Wsu163e
Mapk4
Garre1
Zfp991
Mxra8
Pnkd
Ubfd1
Ears2
Aamp
Mrps35
Smarce1
Axin1
Nanos3
Tcte2
Afdn
Slc25a44
Tubgcp6
Ppfibp1
Brinp1
Jund
Iqcn
Setx
Dus2
Ddx28
Ppp2r5b
Plekha5
Ubtf
Cdk13
Orai1
Ssh1
Msc
Unkl
BC003965
Ahdc1
Cnot11
Hif3a
Suclg2
Phf11d
Cuedc1
Tmem63b
Mrpl14
Fam178b
Ube2c
Mbtps2
Xpo6
Trmt1l
Swt1
Cd55
Rasa2
Nup188
Dolk
Poc1b
Galnt4
Hcn4
Cort
Ginm1
Mael
Zfp64
Pdpk1
Bloc1s5
Marcks
Snai1
Prickle1
Col27a1
Bcl6
Zfat
Tbx20
Camk2n1
Onecut2
Tab1
Ywhag
Bcap31
Abcd1
Tpd52
Rps19
Nfatc1
Wipi2
Naa16
Ltn1
Rwdd2b
Ssc5d
Nat14
Fam102a
Ddx3x
Gprc5a
Timp2
Asah2
H3c13
H2bc18
Ccnd1
Gpbp1
Mylk2
Ghitm
Zfp62
Sf3a1
Ccdc157
Pigk
Rsbn1
Atg14
Prmt9
Srd5a3
Hpgd
Iars2
Bpnt1
Reep5
Wnt3a
Ints14
Mkx
Trim8
Dsn1
Bod1l
Dok5
Spred1
Zfp839
Dvl1
Slc14a1
Cd47
Gpcpd1
Rnf220
Pdpr
Olfr212
Nkx2-5
Acbd5
Ncoa1
Per3
Hectd1
Aoc3
Dis3l
Exosc6
C1ql3
Zfp217
Napepld
Wdr61
Mpzl1
Atp1a1
Dnah2
Smim1
Rab37
Mnt
Ninj1
Erbin
Immp2l
4930402H24Rik
Sumo3
Utp15
Ankra2
Gcnt4
Hacd3
Cdr2l
Dnajc6
Mllt10
Rhbdf1
Mpg
Spx
Klf11
Map2k1
Garnl3
Mettl14
Sap18b
Sap18
Cdhr1
Rtn4rl1
Dph1
Ccpg1os
Ccpg1
Csde1
Stx11
Fnta
Ptges2
Pyurf
Txlng
Macroh2a2
Sh3gl3
Igfbp2
Gpr108
Trip10
Fam53b
Mfap3l
Set
Tmem104
Nat9
Nfatc3
Gdap1l1
Tmc8
Tmc6
Ripor2
Mapk8
Rrbp1
Kin
Atp5c1
Smarca1
Nrros
Capg
Pkm
Zfp976
Grid2ip
Meaf6
Uhrf1bp1
Ube3c
Zscan30
Zfp35
Mier2
Trim62
Arap2
Igfbpl1
Cltb
Rev3l
Mfsd13b
Cdr2
Shroom3
Phc2
Plk3
Chrm4
Ggps1
Arid4b
Glul
Afg1l
Catip
Tgfbr3l
Snapc2
En2
Gclm
Trim36
Crocc
Fkbp14
Trim68
Sun1
Skor2
Casc3
Plaat3
Glipr1l3
Caps2
Crh
Fignl1
Tcim
Baz1b
Sfn
Klhl23
Epp13
Lag3
Dll4
Ccdc136
Chmp4c
Tigar
Trmt9b
Slc39a4
Tiparp
BC031181
Tmem44
Sntg1
Syne2
Nt5c3
Tmem106b
Osgin2
Polr1d
Lnx2
Plcb4
Loxl3
Dok1
Tsc22d3
Tdh
Tex45
Pex11g
Tspan17
Gls
Hinfp
Zkscan17
Map2k5
Cst3
2510009E07Rik
Gtf3c4
Ddx31
Lcor
Mbp
Tafa3
Ppm1j
Galnt16
Ska3
Mrpl57
Slc39a3
Tpcn2
Sema4b
2700081O15Rik
Phax
Aldh7a1
Fgf5
Pde3a
Hook2
Asap1
Lrrc25
Agpat5
Washc4
Proser2
Ipo8
2700062C07Rik
Tmem200c
Ccdc134
Ptdss1
Mterf3
Chd8
Ppat
Paics
Tmem123
Pou3f3
Gmcl1
Edf1
Rmi1
Hnrnpk
Rexo1
Lrrc8c
Sp5
Rnf8
Prmt8
Tbx1
Cbs
Sin3b
Fosl1
Mtarc1
Dusp4
Cfap300
Smarcd3
Hmgb3
Kcnma1
Tor4a
Nadk2
Axl
Tgfbrap1
AI597479
Cnnm4
Arhgef16
Myo5c
Slco4c1
Ripply1
Adgrl1
Limk1
Cdh1
Zfp36l1
Tubb5
Mdc1
Txnrd2
Comt
Tsc22d4
Nyap1
St3gal3
Inafm2
Tmem256
Nlgn2
Adamts7
Plekhg5
Pdp1
Lpar2
Amd2
Amd1
Pycr1
Myadml2
Xbp1
Prrt4
Kcp
Plekhg2
Cachd1
Krt17
Efnb3
Frmd6
Rnf11
Yy1
Epha10
Tmem121
Usp13
Ptpn14
Slc46a3
Kmt5c
Abcb4
Mthfd2l
Uhrf2
Pcbp2
Mylip
Zfp598
Ssr1
Tra2a
Prkab1
Nid2
Erc1
Zfpm1
Cbfa2t3
Ppia
Ctr9
Cux2
Iqch
Aagab
Ly6g5b
Gpank1
D17H6S53E
Csnk2b
Spink2
Zfp36l2
Dctn4
Gnaq
Zscan5b
Polg
Pcm1
Kazn
Gja4
Chd7
Zfp937
N4bp1
Gabbr1
Gapvd1
Tinagl1
Fgfrl1
Epb41l4a
Flnc
Kl
Kcnh2
Gdpgp1
Cib1
Phlpp2
Ptpre
Phf20
Slc66a2
Plin3
Brwd1
Gm36210
Nectin2
Irf1
Rnase4
Ang
Ppp2cb
Ltb4r2
Ltb4r1
Cideb
Uqcrq
Gdf9
Wipf1
Csad
Letm1
Zfp740
Tspan2
Kcng3
Ndufa6
Bcat2
Pex5l
Nnt
Celf5
Tle4
Prom1
Acta1
Slc27a2
Kif5a
Dctn2
Usp36
Zyg11a
Ppfibp2
Stx8
Cfap52
Fam107b
Sav1
Cdc42ep2
Foxp2
Plcl1
B4galnt3
Ankrd53
Mdm4
Itpkc
Coq8b
Suz12
Cand2
Mex3a
Actn1
Mindy2
Thpo