ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX12142055 | mESCs, differentiated
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◢ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◢ SRX7546913: ES cells

◢ SRX7546914: ES cells

◢ SRX823607: ES cells

◢ SRX12142046: mESCs, differentiated

◢ SRX12142051: mESCs, differentiated

◣ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◢ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Cldn34d
Alg14
Tcstv3
Gdap1l1
Ufsp1
Trabd
Gata4
Gm9736
Eno1
Igsf6
Car14
Atrn
Cd38
Man2a2
Gm3250
Mesp1
Gatad2a
Gm9639
Gm19668
Gid4
Brox
Aida
Letmd1
Znrf1
Macroh2a2
Ppp1r16a
Foxh1
Fgfr2
Rnf220
Gm10318
Notch2
Tfpi
Wrap53
Trp53
Sh2d5
Donson
Prdm4
Lama1
Meox1
Sbk1
Atp1a2
Tbc1d5
Tmc7
Pdgfra
Gm10100
Tor1b
Pabpc1
Zfp964
Tox3
Gm3233
Krtap10-4
Spata24
Mapk3
Vezt
Fgd6
Apbb2
Ubtf
Abl1
Colec12
Grin2c
Ywhae
Smc6
Gen1
Cul5
Mphosph8
Asxl1
Setd5
Cx3cl1
Tnni1
Mrpl23
Mkx
Rbm24
Inf2
Ints9
Hmbox1
Ddx20
Klhl1
Ptch1
Hcfc2
Nudt1
Susd2
Acp5
E030030I06Rik
Gm9508
Gm3285
Dleu7
Pacsin2
Slc26a8
Mapk14
Tenm4
Ccdc102a
Adgrg5
Atoh8
Efcc1
Chd1
Grid2ip
Marchf7
Wdr54
1700003E16Rik
Irgm2
Coq2
Arfgef1
Prelid3a
Hoxb1
Arl2
Ptprz1
Lef1
Kcna2
Lrig3
Mios
Ndufaf4
Rasgrp3
Prr5
Flywch1
Clip4
Pcp4
Chst15
Pigv
Ptpra
Tdrd3
Gm4861
Prrx2
Fbxl7
Qpct
Ddah2
C4bp
Sfxn2
Arl3
Gse1
Spn
Wdr59
Grb2
Zfp9
Fbxo5
Lamb3
Phlpp2
Srrm4
Foxp1
Tspear
Gm19402
Tagln3
Hsd11b2
Apc
Sp5
D3Ertd751e
Sparcl1
Ifitm1
Dbh
Tmem121b
Zdhhc6
Vti1a
Gm9507
Gm2696
Adgra2
Mllt10
Prkag1
Pcif1
H3f3a
Tmem121
Marcks
Itm2b
Acot11
Mapre2
Mpped2
Arhgap32
Nostrin
Adnp2
Pdia3
Catsper2
Meis3
Enpp4
Sorbs3
Mrc1
Gdpgp1
Cib1
Faim
Terf2
H1f2
Zfp975
Chrac1
Glul
Ptch2
Ppp2r5b
Ncoa1
Krtap3-2
Slc12a4
Mbd3
Exoc6b
2300009A05Rik
Casz1
Stra6
Abl2
Nkiras2
Dnajc7
Tmem62
Tanc1
Frzb
Rtkn
Gpsm2
Slc11a1
Wbp4
Elf1
Gm3238
Apool
Pbk
Polg2
Arg1
Prickle1
Gpr179
Ugp2
Omp
Oga
Zfp976
Sh3rf1
Hipk2
Col13a1
Setd1b
Rhof
Abca9
Sort1
Wipi2
Il6ra
Hoxb3
Plb1
Cfc1
Tbc1d10b
Mylpf
Ndrg1
Igdcc3
Ssh1
Nbea
Cacng2
Cdkn2aip
Actn1
Ppp2ca
Mdga1
Ccn2
Tmem63b
Mrpl14
Atxn3
Tff3
Pdcd2
Pxdc1
Coro2a
Rnf125
Ptk7
Phf10
Arhgap42
Fam227b
Dtwd1
Mthfd2l
Mapk8
Inha
Obsl1
Zfp91
Lpxn
Slc37a3
Rab19
Klf5
Zbtb22
Tapbp
Zbtb25
Zbtb1
Tsga10
Fam117a
Hes7
B3gnt2
Dynll2
Ypel1
Pum1
Duxbl3
Duxbl2
Duxbl1
Cachd1
Tmco4
R3hdm2
Ncdn
AU040320
Tmem119
Dlc1
Rheb
Arap2
Usp13
Pgrmc2
Nova1
Hoxa2
Acta1
Lyzl6
Ralb
Mllt1
Tle4
Hs3st3a1
Slc14a1
Flacc1
Appl2
Vsir
Dennd1a
Tef
Fstl1
Fnta
Coil
H2az2
Lzts2
Pdxdc1
Mpv17l
Stc2
Serpina12
Csrp2
App
Trappc5
Fcor
Efna3
Garre1
Cep70
Rpp14
Htd2
D5Ertd579e
Slc25a44
Ednrb
Pdp2
Brinp1
Erc1
Spink4
Smad7
Sema6a
Slc16a9
G2e3
Tmed7
Eif1a
Mab21l1
Snai1
Calu
Pnrc1
Ywhag
Cd24a
Sod3
Gas1
Tmem222
Spry2
Ccdc30
Cox5a
Tbc1d9
Pde3a
Zfp868
Zkscan5
Zkscan14
Golm2
Ppp2r3a
B4galt2
Atp6v0b
Tcf7l2
Cacng7
Speg
Adcyap1
Abca8b
Zfp36l2
Tgfbr1
C1ql1
Tmem42
Lfng
Znhit2
Mrpl49
Fau
Igsf23
Got2
Cpox
Prnp
Prn
Naa16
Slc18a3
Chat
Mreg
Chid1
Usp32
Accs
Kif5c
Gm36176
Rtcb
Spg20
Tmub1
Fastk
Asap2
Adnp
P3h1
AU022252
Nhsl2
Bcl7b
Parp6
Smarcd3
Kcnab3
Pkm
Trappc1
Cntrob
Flrt2
Hmga1b
Hmga1
Snn
Eif4e
Rest
Mn1
Hnrnpa2b1
Cbx3
Pdpr
Wdr61
Pald1
Rbm47
Adamts20
Atp1b2
Dnajc10
Bcl10
Lrrc8d
Cfap300
Proser2
H3c15
H3c14
H2ac19
H2ac18
Soga3
Vrk1
Inafm2
Phc2
Foxf1
Trmt1
Nacc1
Rcsd1
Dtx1
Fads2
Pitx3
Gbf1
Hapln4
Tmem229a
Neurog3
Zfp62
Mdm4
Sema3g
Nkx2-5
Epb41l2
Mterf1a
Fn1
Msra
Setx
Gna14
Krtap10-10
Epn3
Asap1
Shroom3
Cpt1a
Fgf6
Prom1
Thsd7a
Abr
Tha1
Snrnp70
Trim36
Clcn4
P3h2
Zfand6
Rbms1
Fscn1
Reep2
Lrrc38
Krtap3-3
Fam178b
Ctdsp2
Ap1g2
Gm2237
Cyth1
Cand2
Ccdc66
Tmem131l
Tab1
Mad2l2
Draxin
Lrp2
Atg5
Mtfp1
Ptdss2
Spag4
Dusp4
Stx11
Kcnq3
Shoc2
Bbip1
Tgfb2
Tulp4
Sugt1
6820408C15Rik
Zcchc3
Rmi1
Hnrnpk
Zhx1
Hdac1
Lpgat1
Glipr1l3
Caps2
Cxxc4
H3c13
H2bc18
Kdm2b
Iqcf6
Rnase4
Ang
Cdyl
Glra1
Ppp1ccb
Ppp1cc
Raph1
Cers3
Kctd9
Cdca2
Pcdh19
Togaram1
Klhl28
Dcaf11
Ptpn14
Kctd12
Prtg
Sun1
Krba1
Kmt2a
Pbx1
Csrp1
Prmt9
Flnc
Neurl1a
Rnf8
Gm11559
Aktip
Usp37
Cnot9
Psd
Fbxl15
Zfp286
Neil1
Nphp3
Lamb1
Pygo2
Ttc21b
Bloc1s5
Slc6a16
Cd37
Ptpdc1
Ssbp2
Slc22a6
Clasp2
Usp36
Ncor2
B3gnt4
Tpm1
Vpreb3
Gm867
Lhx1
Mterf1b
Trim68
Jak2
Itpkc
Coq8b
Gna13
Gm17660
Armc4
Smarce1
S1pr5
Lifr
Phf20
Gsx1
Dab2ip
Atp11b
Hectd1
Mob4
Rnaseh2b
Glrx3
Schip1
Per3
Anks6
Col26a1
H2bc6
H1f4
Umad1
Rpa3
Mamstr
2510009E07Rik
Foxo6
Epha2
Casc3
Utp15
Ankra2
Nudt9
Zbtb18
Pdik1l
Mapk4
Slc25a47
Pvr
Zfp687
Ncoa2
Raf1
Rrm2
Grip1
Slc35g2
Camta2
Meis1
Mafg
Tbc1d4
Ulk2
Wnt2
Zfpm1
Rmdn1
Cpne3
Gm10267
Btbd7
Gbx2
Sf3a1
Ccdc157
Slain2
Gm11568
Serpini1
Pdcd10
Map3k20
Slc7a7
Adck5
Scrt2
Bcl6
Cpxm1
C2cd2
Col5a1
Pkn2
Zfp319
Usb1
Sowahc
Septin10
Lrrn1
Hes6
Rad51ap1
D6Wsu163e
Mbp
Gpr108
Zfp787
Ccdc60
Vdac3
Mogat2
Dph5
Pax7
Arhgap6
Pm20d2
Slc66a2
Trerf1
Cand1
Mycbp2
Zdhhc2
Epha4
Nkx3-2
Borcs5
Zfhx3
Fahd2a
Rbpjl
Matn4
Tlr2
Scd1
Slc25a22
Akt2
Dctn4
Dtnbp1
Slc12a2
Ust
Scaf11
Zscan30
Zfp35
Lgmn
Ghitm
Mical1
Arid3c
Ehmt2
Mob1a
Zbtb12
Yod1
Pfkfb2
Jade1
B4galt7
Pcmt1
Lats1
Calr4
Pik3r3
Cxxc5
2700081O15Rik
Brwd1
Dbx2
Gpr142
Epha1
Zeb2
Exd2
Adm
Prob1
Mzb1
Plekhh1
Tafa3
Ppm1j
Itgb7
Mfap3l
Anp32a
Gm20346
Ppdpf
Ndnf
Fbrsl1
Immp2l
Msh5
Clic1
Msh6
Triobp
Hmx3
Soat1
Tbl1xr1
Slc4a2
Cdk5
Zmynd8
Dgkh
Sulf1
Tmem161a
Fbxo11
Taf6l
Coa4
Kcnj4
Lrrc4b
Srd5a3
Pdrg1
Cd47
AI413582
Septin2
Hdlbp
Onecut2
Rab4a
Epop
Mt1
Rab11fip1
Smarca1
Dmap1
Nynrin
Otud4
Foxa2
Fbxl19
Rnasek
0610010K14Rik
Wnt2b
Dll3
Cd63
Cfap20dc
Smtn
Kcnn2
Picalm
Slc31a1
Fkbp15
Rbm45
Sdc4
2310022B05Rik
Rybp
Wdr86
Ntng1
Sorcs3
Cort
Spint1
Tcirg1
Slc25a24
Coch
Pramel13
Syne2
Cct2
Park7
Pde5a
Pelp1
Mylip
Gm3739
Napepld
Socs5
Afap1
Aaas
Oxct1
Mmp15
Setdb2
Gm45935
Cab39l
Rffl
Ezh1
B3gnt7
Slc9a3r1
Abi2
Sec22c
Bcap31
Abcd1
Rnf103
Arx
Ube2d1
Rrbp1
Sox12
Ttc28
Nodal
Tmem98
Rassf4
Slc25a36
Col12a1
Cdhr1
Smad4
Zkscan6
Dpf1
Klhdc8b
Ccdc71
Gm4981
Gm11567
Trip10
Rpl10a
Loxl3
Dok1
Gnaq
Asah2
Tada1
Cnn3
Tchh
B4galt1
Tmem256
Nlgn2
Prkag2
Sytl3
Zfp365
Ift140
Cramp1l
Ndfip2
Agfg1
Capg
Snx17
Eif2b4
Tmem104
Nat9
Cc2d2a
Xpo6
Slc2a9
Tcf20
Tsc22d3
Alg9
Cdk6
Barhl1
Zfat
Klhl22
Slc24a3
Fkbpl
Kank2
Igfbpl1
Atad2b
Eif4g2
Sprr2a3
Ldlrad2
Psmb10
Ctrl
Plaat3
Col27a1
Nectin2
Map1lc3b
Kcnj10
Ltb4r2
Ltb4r1
Cideb
BC107364
Gpr84
Ano6
Timm44
Fam90a1b
Apoo
Pcgf1
Fzd8
Ap1g1
Tmem262
Zfpl1
Cdca5
Nkap
Aoc3
Ipo8
Atrnl1
Lhfpl2
Mink1
Slc12a5
Magi3
Ror1
Hsdl1
Dnaaf1
Fam136a
Smad6
Epm2a
Twf2
Ppm1m
Pax6
Gpbp1
Fermt2
Fzd7
Tbx1
Laptm4b
Fhl2
Rassf8
Dnttip2
Cnot2
Klhl15
Cep63
Anapc13
Reln
Disp1
Zfp36
Plekha7
Ptdss1
Mterf3
Ppp3cb
Sbno2
Sgk1
Hes1
Pdha1
Pdzd2
Rnf216
Kcnip4
Septin3
Sema6d
Fndc3c1
Pik3cd
Ctr9
Tle2
Mkrn2
Camk2n1
Cdk19
G0s2
Olfr461
Polr2b
Noa1
Evx2
Coa3
Cntd1
Hook2
Gab1
Tiparp
Nfatc3
Arhgap24
Tafa5
Tubb2b
Mturn
Pitpnm1
Cdk2ap2
Rcc2
Ncoa7
Vwa2
Adamts7
Slc22a23
Cux2
Fitm2
Itpr2
Maml2
Hmgxb4
Arhgap33
Tprn
Ppat
Paics
Hsp90ab1
Cdr2l
Fyn
Klf4
Atg12
Ap3s1
Mib2
Enah
Ltc4s
Numa1
Ndufab1
Prcc
Nsrp1
Col19a1
Piwil1
Cspp1
Cops5
Fam118a
Iqgap2
Malt1
Sec22b
Maz
Sh3bp2
P2ry1
Galnt16
Afg1l
Sema4b
Tle6
Gpr83
Zfp667
Shprh
Abhd12
Phf12
Cd109
Aipl1
Prrc2b
Sptssa
Hey1
Tox
Zfp24
Slc26a9
Asb4
Wscd1
Slc16a5
Fgf5
Adam22
Txndc12
Btf3l4