ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX15057958 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◢ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◢ SRX7546913: ES cells

◢ SRX7546914: ES cells

◢ SRX823607: ES cells

◢ SRX12142046: mESCs, differentiated

◢ SRX12142051: mESCs, differentiated

◢ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◣ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Cd38
Alg14
Atrn
Cldn34d
Tcstv3
Gatad2a
Fgf5
Smc6
Gen1
Eno1
Pabpc1
Sbk1
Gid4
Lypla1
Asxl1
Ufsp1
Letmd1
Zcrb1
Pphln1
Enpp4
Man2a2
Slc7a7
Slc6a16
Cd37
Grb2
Zfp980
Mphosph8
Mkx
Tal2
Ints9
Hmbox1
Gm4861
Znrf1
Irgm1
Coq2
Wrap53
Trp53
Slc37a3
Rab19
Rbm47
Ywhae
Donson
Wsb2
Wipi2
Lama1
Mup4
Slc25a4
Pacsin2
Ubtf
Itm2b
Tbc1d5
Pitx3
Gbf1
Snrnp70
Pcif1
Fbxo5
Slc12a4
Trabd
Prdm4
Apbb2
Cul5
Lefty1
Frzb
Ptprz1
Mllt10
Vezt
Fgd6
Ror1
Stmn1
Oga
Arfgef1
Zfp964
Rnf220
Apc
Ppp2ca
Marchf7
Kdm2b
Spata24
Mmp25
Adnp2
Exoc6b
Phf10
Colec12
Mycn
Mdm4
Inafm2
Mrpl23
Ccno
Pou5f1
Nudt1
Trim62
Pmaip1
E030030I06Rik
Tmco4
Flywch1
Ptpra
Abl1
Tmed7
Eif1a
Acp5
Zfp36
Tbc1d10b
Mylpf
2610528J11Rik
Mterf1b
Syne1
Zfp9
H2-DMa
Brd2
Zfp600
Asah2
Otop1
Dhx32
Cyp51
Ddx20
Rpp14
Htd2
Pdcd2
Tagln3
Kif13b
Coil
Smarcd1
Sfxn2
Arl3
Fstl1
Terf2
Ccdc60
Golm2
Chd1
Trip12
Fbxo36
Arl2
Sema6a
Soga3
Pnrc1
Zfp979
Shoc2
Bbip1
G2e3
Trim33
Faim
Klf5
Pxdc1
Tmem59l
Crlf1
Lrrc8d
Mios
Gata4
Enah
Hook2
Abl2
Cep70
Polg2
Kif17
Mterf1a
Mbd3
Setd5
Ndrg1
Tent5c
Mcf2l
Pvr
Cds1
Pramel13
Olfr1034
Notch2
Il17d
Rnf8
Trh
Glul
Mreg
Sp5
Dynll2
Marcks
Mapre2
Gdpgp1
Cib1
Zdhhc6
Vti1a
Sptb
Plcxd1
R3hdm2
Slc39a4
Lrrn4
Nkiras2
Dnajc7
B3gnt7
Ms4a10
Arap2
H1f2
Slc26a8
Mapk14
Nbea
Ncdn
AU040320
Tmem131l
Ednrb
Agfg1
Phlpp2
Pald1
Ttc21b
Sh3rf1
Tmem62
Ddah2
Smad4
Trappc5
Fcor
Prelid3a
Setd1b
Arhgap32
Snn
Irgm2
Usp36
Asap2
Pum1
T2
Lzts2
Ksr2
Nsrp1
Hnrnpa2b1
Cbx3
H3f3a
Fbxl7
Cerkl
Zfp978
Pou2f1
Arid3c
Usp37
Cnot9
Cdkn2aip
Zfand6
Lifr
Chrac1
Esrrg
Coro2a
Atxn3
Scd1
Rps6ka3
Ralb
Trim25
Gpsm2
Qpct
Hcfc2
Wdr59
Mapk4
Ephx2
Ccdc30
Mpped2
Pdia3
Catsper2
Hoxa2
Ncs1
Dnaaf3
Pelp1
Tmem63b
Mrpl14
Spry2
Epb41l1
Tfeb
Ifitm7
Bmerb1
Tgfbr1
Phc2
Zbtb22
Tapbp
Rmi1
Hnrnpk
Gngt2
Abi3
Dpp10
Slco5a1
Parp6
Ptch2
C1ql1
Actn1
Pdpr
Mab21l1
Olfr813
Serpini1
Pdcd10
Rmnd5b
Smarca1
Zfp341
Prmt9
Radil
Zfp868
Zfp62
Myo10
App
Cpsf4l
Csnk2a1
Usp13
Scrt2
Slc12a2
Hoxc13
Ppp3cb
Neil2
Serpinf2
Slc4a2
Cdk5
Tbl1xr1
Tmem121
Enpp3
Espn
Rbm45
Zbtb7b
Exd2
Usp32
2300009A05Rik
Gja1
Efemp1
Ptprg
Fbxo11
Rtcb
Kazn
Slc19a3
Castor1
Ptk7
Smad7
Ropn1l
Hif3a
Hoxb13
Epp13
Dmtn
Ubr5
Prkag1
Loxl3
Dok1
Tab1
Ttc9b
Prss30
Prkar1a
Aktip
Strn3
Ap4s1
Tcf7l2
Pde3a
Dgkd
Ptpn13
H2az2
Ppp2r5b
Rnf125
Brox
Aida
Rheb
Rab4a
Hsd11b2
Zfp532
Pdxdc1
Mpv17l
Znhit2
Mrpl49
Fau
Naa16
Col5a1
Mthfd2l
Ackr3
Zbtb25
Zbtb1
Slc9a3
Rasgrp2
Ptdss2
Mea1
Klhdc3
Garre1
Cdkl2
Cpt1a
Tmem42
Pms1
Ormdl1
Rab13
Ncoa1
Kcnj4
Klhl1
Cacng2
Gdap1l1
4930474N05Rik
Msh6
Ccer2
Klhdc8b
Ccdc71
Mybph
Dnmt3a
Spint1
Arhgap42
Itpkc
Coq8b
Mib2
Pik3r3
Mbp
Trim72
Cox5a
Gas2
Fancf
Camk1d
Tfpi
Slc16a9
Col13a1
Cfap300
Fam107a
Hipk4
Rtkn
Fam50b
Tsga10
Timm44
Ppat
Paics
6820408C15Rik
Zcchc3
Rif1
Coa4
Prrc2b
Hsdl1
Dnaaf1
Flrt2
Zfp64
Dennd1a
Kcnn2
Pdp2
Picalm
Chid1
Prickle1
Sec22c
Wdr61
Nat8f5
Cyp27a1
Hdac1
BC048679
Ap3b2
Vdac3
Bcl7b
Usp10
Liph
Zfp976
Glra1
Skil
Mtfr1l
Fam241b
Ptch1
Mturn
4930402H24Rik
Cd47
Tle4
Smim5
Shc1
Cks1b
Emb
Zdhhc2
Tmeff1
Kif5c
Fads1
Dlx6
Cdh1
Set
Srd5a3
Neil1
Dner
Med12l
Ptpdc1
Kctd6
Capg
Inha
Obsl1
Stk32a
Kcnq3
Fam160b2
Zfp267
Fam227b
Dtwd1
Rtn4rl1
Dph1
Tpd52
Chn1
Vgll3
Jund
Iqcn
Xpo6
Ccdc194
Akt2
Cdhr1
Tdrd3
Gsx1
Proser2
Mapk8
Tor4a
Tmc7
Casc3
Msc
Duxbl3
Duxbl2
Duxbl1
Zfp839
Snx17
Eif2b4
Foxd2
H3c13
H2bc18
Hinfp
Tanc1
Trmt1
Nacc1
Pcbp2
Ehmt2
Zbtb12
Slc35f2
Mmp15
Oplah
Fgf6
Slc44a4
Ddx60
Tprn
Gimap3
Krba1
Tle6
Tcirg1
Rragc
Trim68
Smim1
Sdc4
Mllt6
Csk
Ust
Rgs12
P3h1
AU022252
Nphp3
Cltb
Stat5b
Sox7
Hipk2
Nr2f6
Socs5
Phc1
Vmn1r1
Dctn4
Pcdh8
Vrk1
Ggps1
Arid4b
Ssh1
Car14
Mapk3
Cd24a
Tubb5
Mdc1
Togaram1
Klhl28
Adam22
Cfhr3
Lrrc8b
Brinp1
Secisbp2l
Fbrsl1
Mink1
Alg13
Meaf6
Fam136a
Tmem121b
Plk3
Tfap2c
Zyg11a
Cluh
Malt1
Pef1
Pygo2
Eif4e
Anks6
Pik3r4
D5Ertd579e
Gpr108
Trip10
Hcn1
Arhgap24
Phyhipl
Apoe
Adamts20
Ccdc177
AI661453
1700001C19Rik
Ccn2
Fam178b
Napepld
Appl2
Jak2
Rragd
Krt17
Rock2
Ctxn2
Rab37
Rnaset2b
Rnaset2a
Mt1
Ttc14
Hmga1b
Hmga1
Kcnh8
Fahd2a
Unkl
BC003965
Mob1a
Kat7
C2cd2
Pdha1
Kctd9
Cdca2
Ptpn14
Pgrmc2
Faap20
Icam1
Spg20
Mafg
Nup85
Dcaf11
Dab1
Pik3cd
Immp2l
Galk1
Tada1
Bcl10
Pkm
Epn3
Tbc1d9
Dgkh
Smarcd3
Ankle2
Slc25a22
Clcn4
Parp8
Ost4
Cga
Slc30a9
Dvl1
H3c15
H3c14
H2ac19
H2ac18
Umad1
Rpa3
Nid2
Tfg
Igf2bp3
Cuedc1
Hmgxb4
Zfp981
B4galt1
Fnta
Mnx1
Pnkd
Aamp
B3gnt4
Cand2
Ltb4r2
Ltb4r1
Cideb
Sfn
Spdef
Irx2
Ppp2r3a
Zfp36l1
Fn1
Per3
Chst15
Jakmip1
Retreg1
Cct2
Hivep2
Slc46a3
Psd3
Zfp91
Lpxn
B4galt2
Atp6v0b
Ypel1
Ccdc3
Cnn3
Phf20
Rgl2
Cacng7
Hectd1
Tdgf1
Lrrc2
Rps10
AI413582
Nadk2
Hr
Sec22b
Stc2
Klhl34
Suz12
Ift140
Cramp1l
Aff4
Rsph4a
Utp14b
Acsl3
Tmem161a
Chrna9
Alg9
Rab33b
Atg5
Olfr1028
Ddx3x
Zfp977
Sbk2
Ppara
Nkx2-5
Speer4f1
Csrp2
Poc1b
Galnt4
Asap1
Stx11
Ctdsp2
Prmt8
Ap2m1
Slc22a23
Skor1
Slc40a1
Zkscan5
Zkscan14
Btbd1
Ntng1
Slc27a2
Il18
Bco2
Slc4a5
Adam12
Ltbp4
Fgfr2
Iqcc
Ccdc28b
Dcdc2b
P2ry1
Erc1
Rufy3
Rev3l
Galnt12
Scaf11
Mical1
Bcat2
Pdk1
Trim36
Sema4d
Slc13a2
Ctf1
Bcl7c
Mllt1
Sntb2
Fignl2
Sf3a1
Ccdc157
Mfap3l
Tulp4
Mov10
Cxcl11
Kiss1
Got2
Cux2
Sugt1
9930012K11Rik
Klc3
Scrt1
BC107364
Kmt2c
Ptpn3
Rhbdf1
Mpg
Esrp2
Fem1c
Aoc3
C1ql3
Gm3173
Ndufa6
Ran
B3gnt2
Tpm1
Ubtd1
Mms19
Clip4
Slc23a1
Tle2
Srpr
Foxred1
Plekhh1
Lypd6b
Slc14a1
Septin2
Hdlbp
Zfp787
Tmem199
Poldip2
Ctr9
Slc25a44
Cd63
Gja4
Raph1
Wtap
Uqcrq
Gdf9
Tmem175
Gak
Atrnl1
Tvp23a
Cand1
Abca8b
Ttc28
Cds2
Tchh
Pus3
Ddx25
Gapvd1
Eml6
Sowahc
Septin10
Nefh
Ap1b1
Fam118a
Ppp1ccb
Ppp1cc
Fgf4
Macroh2a2
Trim7
Lsm8
Nkx3-2
Soat1
Adgra2
Ndufab1
Mnt
Impdh2
Mettl9
Pias3
Fam222b
Ipo8
Rimbp3
Recql4
Lrrc14
Zfp996
Gna13
Usp44
Trim13
Lrrn2
Ndufaf4
Kank2
Zbtb8a
Cenpb
Fam20b
Thsd7b
Cd300lg
Rrm2
Gm2237
Sox2
Exosc6
Paip1
Herc6
Tob1
Uhrf2
Ccpg1os
Ccpg1
Rps23rg1
Rassf8
Ugp2
Cass4
Schip1
Arrb1
Clasp1
Dhrs7b
Tef
Mob1b
Plxna1
Parp12
Ube3c
Teddm3
Kcnab3
Trappc1
Cntrob
Tmem189
Lpgat1
Srsf2
Mfsd11
Mzt1
Bora
Cmas
Dnah2
Cdk6
Slc9a3r1
Mrps15
Cltc
Raet1e
Raet1a
Gzme
Zfp687
Pdpn
Tmem229a
Fbxo25
Phldb1
Rcc2
1190005I06Rik
Ccdc9
Slc66a2
Epm2a
Psap
Neurog3
Ltc4s
Baz1b
Zfp217
Mrps23
Pcbp1
Extl3
Atp11b
Ccdc6
Herpud2
Dab2ip
Col27a1
Afap1l2
Timm9
2700049A03Rik
Mkrn2
Tdh
Klf4
Igfbpl1
Steap3
Smtn
Htr2a
Pou3f3
Ncoa2
Ifitm1
Zfat
Col2a1
Myo1e
Rnf103
Foxo6
Spag4
Kcng3
Dpf3
Fzd10
Cdk13
Fam90a1b
Apoo
Casq2
Maz
Tmem178
Atad2b
Prrt2
Nfat5
Fadd
Reep2
Dusp4
Prr19
Iqgap2
Tmem145
Fitm2
Smndc1
Magi3
Phlda3
Shox2
Rsrc1
Dpf1
Cnbp
Zfp36l2
Eif4g2
Gm10406
Cox8b
Glipr1l3
Caps2
Itga1
Tnk2
Strn
Rorb
Ptdss1
Mterf3
Nanog
Pdpk1
Mamstr
Mpc1
Foxf1
Mael
Wdr20
2210016F16Rik
Klhl22
Cachd1
Socs2
Nectin2
Rnf11
Zfp219
Tmem253
Bcl6
Dyrk4
Sp4
Slc25a17
Trim8
Trmt61a
Map3k20
P4hb
Zscan30
Zfp35
Ap1g1
Slc45a3
Mlf2
Agtrap
Pbld2
Hnrnph3