ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX15057955 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◢ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◢ SRX7546913: ES cells

◢ SRX7546914: ES cells

◢ SRX823607: ES cells

◢ SRX12142046: mESCs, differentiated

◢ SRX12142051: mESCs, differentiated

◢ SRX12142055: mESCs, differentiated

◣ SRX15057955: mESCs, differentiated

◢ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Tcstv3
Cldn34d
Alg14
Cd38
Ufsp1
Asxl1
Atrn
Smc6
Gen1
Itm2b
Slc7a7
Pabpc1
Zfp980
Pitx3
Gbf1
Trim62
Letmd1
Gatad2a
Gid4
Eno1
Slc6a16
Cd37
Mkx
Fgf5
Rbm47
Mycn
Zfp978
Man2a2
Ptprz1
Tbc1d10b
Mylpf
H2-DMa
Brd2
Lypla1
Ints9
Hmbox1
Sbk1
Gm4861
Enpp4
Strn3
Ap4s1
Adnp2
Pou5f1
Marchf7
Donson
Rnf220
Radil
Znrf1
Ubtf
Wsb2
Mphosph8
Zfp964
Ccno
Zcrb1
Pphln1
Apc
Ywhae
Brox
Aida
Pacsin2
Mmp25
Arfgef1
Smarcd1
Irgm1
Sfxn2
Arl3
Pcif1
Tmco4
Mrpl23
Zfp600
Slc12a4
Lefty1
Cpt1a
Apbb2
Fbxo5
Prdm4
Asap2
Ccer2
Wrap53
Trp53
Frzb
Lrrn4
Mllt10
Mdm4
Cul5
Mup4
E030030I06Rik
Trip12
Fbxo36
Tmed7
Eif1a
Snrnp70
Oga
Kif13b
Slc25a4
Ror1
B3gnt7
Grb2
Otop1
Trabd
Sp5
Rnf125
Wipi2
Tbc1d5
Mapre2
Colec12
Tal2
Coq2
Notch2
Cerkl
Vezt
Fgd6
R3hdm2
Hoxa2
Spata24
Tmem131l
Ppp2ca
Lifr
Hnrnpa2b1
Cbx3
Zfp979
Stmn1
Glul
Slc37a3
Rab19
Spry2
Ptpra
Hcfc2
Golm2
Mpped2
Zfp9
Arap2
Pdcd2
T2
Ddx20
H1f2
Tagln3
Gata4
Zfp267
Sh3rf1
Plcxd1
Slc9a3
Kdm2b
Sptb
Abl2
Hook2
Pxdc1
Rpp14
Htd2
Abl1
Cep70
Hsd11b2
Ptk7
Prelid3a
Rif1
Mcf2l
Arhgap42
Soga3
Cds1
Setd5
Mbd3
Zdhhc6
Vti1a
Ccdc30
Speer4f1
Defb46
Zfp341
Zfp36
Smad7
Ndrg1
Pik3r4
Ccdc60
Hdac1
Phf10
App
Mab21l1
Lrrc8d
Tent5c
Ptch2
Mib2
Slc19a3
Polg2
Chrac1
Espn
Olfr1034
Agfg1
Sema6a
Rtn4rl1
Dph1
Pik3r3
Slc44a4
Lama1
Cyp51
Kif17
Terf2
Rmi1
Hnrnpk
Ropn1l
Hoxb13
Ephx2
Smad4
Tanc1
Wdr59
Mreg
AI413582
Acp5
Pmaip1
H3f3a
Smim5
Slc39a4
Setd1b
Hif3a
Epb41l1
Il17d
Mapk4
Chd1
Ubr5
Usp13
Pou2f1
Prkag1
Nudt1
Enpp3
Enah
Stat5b
Zfp62
Aff4
Coil
Rps10
Mterf1b
Ms4a10
Wdr61
Pdia3
Catsper2
Inha
Obsl1
Qpct
Tmem59l
Crlf1
Trim72
Fam241b
Trh
Arhgap32
Tsga10
C1ql1
Ctxn2
Kazn
Tmc7
Zdhhc2
P4hb
Slc16a9
Klf5
Myo10
Trim25
Zfp868
Casc3
Phlpp2
Ncs1
4930474N05Rik
Trappc5
Fcor
Slco5a1
Rmnd5b
Slc23a1
G2e3
Klhl1
Olfr813
Ddah2
Zfp981
Tfeb
Marcks
Nr2f6
Ncdn
AU040320
Tmem63b
Mrpl14
Foxd2
Prmt9
Rbm45
2610528J11Rik
Macroh2a2
Scd1
Rnf8
Serpinf2
Vmn1r1
Fbxl7
6820408C15Rik
Zcchc3
Rrm2
Exoc6b
Pgrmc2
Cltb
Rps6ka3
Inafm2
Skil
Sema4d
Loxl3
Dok1
Skor1
Unkl
BC003965
Hoxc13
Flrt2
Mapk8
Mios
Fam227b
Dtwd1
Zbtb7b
Msc
BC048679
Ap3b2
Cdh1
Dynll2
P3h1
AU022252
Irgm2
Pelp1
Zfp64
Pramel13
Flywch1
Dmtn
Zfp532
Dnaaf3
Fstl1
Pdxdc1
Mpv17l
Rev3l
Lzts2
Bcl7b
Bcat2
Cfap300
Atxn3
Reep2
Slc26a8
Mapk14
Kif5c
Ccdc6
Nbea
Ankle2
Tle4
Rragc
Prss30
Chid1
H2az2
Garre1
Emb
Cdkl2
Cdhr1
Cd47
Ccdc3
1190005I06Rik
Hipk4
Mybph
Gdpgp1
Cib1
Aktip
Ehmt2
Zbtb12
Asah2
Kcnc2
Pvr
Gsx1
Mterf1a
Mthfd2l
Pum1
Rab13
Dnmt3a
Efemp1
Setx
Ank
Zbtb22
Tapbp
H3c13
H2bc18
BC107364
Trim33
Parp6
Fut4
Dlx6
Ppp2r5b
Tpd52
Sugt1
Slc12a2
Cdkn2aip
Ggps1
Arid4b
Zfp459
Eml6
Ccn2
Smarca1
Trim7
Med12l
Fam50b
Nkiras2
Dnajc7
Tmem121
Pnrc1
Pald1
Dpp10
Syne1
Prrc2b
Kcnj4
Pdpr
Ksr2
Olfr829
Hmga1b
Hmga1
Teddm3
Pde3a
Stk32a
Ppp3cb
Faim
Mbp
Ackr3
Arid3c
Hivep2
Slc4a2
Cdk5
Epp13
Naa16
Got2
Zfp687
Mink1
Jakmip1
Ddx60
Zfp787
9930012K11Rik
Tcf7l2
Snx17
Eif2b4
Set
Nsrp1
Camk1d
Fads1
Rab4a
Mt1
Ncoa1
Ypel1
Ccdc9
Rragd
Tbl1xr1
P2ry1
Gdap1l1
Shoc2
Bbip1
Phc1
Cdk6
Picalm
Timd4
Zbtb25
Zbtb1
Stx11
Msh6
Clasp1
Esrrg
Gimap3
Fbxo11
Klhdc8b
Ccdc71
Vdac3
Ednrb
Il18
Bco2
Cpsf4l
Mmp15
Gm4922
Tmem62
Shroom3
Ptprg
Foxf1
Ltb4r2
Ltb4r1
Cideb
Col5a1
Mcam
Gpsm2
Mnx1
Hsbp1l1
Tada1
Magi3
Tmeff1
Duxbl3
Duxbl2
Duxbl1
Ltbp4
Tgfbr1
Ppp1r36
Slc38a2
Nid2
Vrk1
Bhlhe40
Lrrn2
Tulp4
Fbrsl1
Gngt2
Abi3
4930402H24Rik
Prmt8
Cyp27a1
Gas2
Fancf
Kctd6
Pcdh8
Hipk2
Usp32
Trerf1
Fignl2
Ptpn13
Serpini1
Pdcd10
Csn1s2a
Arl2
Dennd1a
Ltc4s
Itpkc
Coq8b
Krt17
Ttc21b
Dhx32
Immp2l
Gja1
Exd2
Dgkd
Mgat1
Slc30a9
H3c15
H3c14
H2ac19
H2ac18
Parp8
Col13a1
Mllt6
Raet1e
Raet1a
Ust
Cga
Utp14b
Acsl3
Hapln4
Vrtn
Cd24a
Cd63
Chn1
Maz
Prrt2
Usp37
Cnot9
Snn
Tab1
Sec22c
Ube2d1
Meaf6
Pygo2
Kcnn2
Hmgxb4
Hr
Dennd2c
Epn3
Zyg11a
Cct2
Nkx2-5
Nup85
Gcn1
Napepld
Rasgrp2
Tdh
Adam22
Slc46a3
Scrt2
Ttc9b
Nphp3
Asap1
Stc2
Cds2
Adamts20
Kmt2c
Ralb
Dock6
Fam107a
Chst15
Actn1
Rtcb
Anks6
Mical1
Phyhipl
Spink2
Car14
Tprn
Fam160b2
Tmem42
Coa4
Tfap2c
Fgf4
Ttc22
Lexm
Smarcd3
Tnk2
Apoe
Gm4925
Arl1
Il31ra
Dgkh
Ifitm7
Bmerb1
Zfp839
Xpo6
Tle6
Tvp23a
Jarid2
Mapk3
Phf20
Nemf
Gm3285
D030056L22Rik
Galnt12
Liph
Fem1c
Adgra2
Spg20
Slc35f2
2300009A05Rik
Ndufa6
Pef1
Csnk2a1
Gpn1
Tha1
H2bc22
H2ac22
Tfg
Tcea3
Rassf8
Sox2
Eif4e
Pcbp2
Lsmem2
Timm44
Aoc3
Fn1
Neil1
Lsm8
Agtrap
Spint1
Srpr
Foxred1
Slc25a36
Ndufaf4
Ptpn14
Hinfp
Rheb
Gm10318
Trim36
Glis3
Fzd10
Hacd1
D3Ertd751e
Baz1b
Dctn4
Rtn2
Ppm1n
1700034J05Rik
B3gnt2
Barx2
Fnta
Dcaf11
Cd300lg
C2cd2
H3c11
H1f5
Sec22b
Cep112
Tor4a
Ptdss2
Slc27a2
Pias3
Mylip
Crocc
Prkar1a
Trim68
Tubb5
Mdc1
Gabbr1
Shc1
Cks1b
St6galnac2
Clip4
Per3
Klc3
Gpm6a
Togaram1
Klhl28
Zfand6
Dab2ip
Tob1
Slc14a1
Pdk1
Fbp1
Gzme
Vgll3
Sspn
Afap1l2
Sdc4
Klhl22
Npcd
Cbx6
Gm9639
Gm19668
Ppara
Ddb2
Neurog3
Parp12
Tcirg1
Proser1
Nhlrc3
Gm3739
Usp36
Prr19
Tmem145
Pcbp1
Itga1
Slc39a7
Rxrb
H2-Ke6
Hsdl1
Dnaaf1
Trim8
Capg
Pdpk1
Mafg
Faap20
Dipk1c
Tpm1
Nfatc3
Mob1b
Lag3
Ptp4a2
Gm9222
Zfp91
Lpxn
Ccdc177
Prickle1
Srd5a3
B4galt2
Atp6v0b
Nrf1
Steap3
Ptpn3
Mad2l2
Draxin
Irx2
Sbk2
Upp2
Acvr1
Rufy3
Plcb4
Rsph4a
Olfr1028
Zfp286
Pyurf
Cic
Ost4
Pdrg1
Vsx1
Dus2
Ddx28
Tdrd3
Hcn1
Gapvd1
Trmt1
Nacc1
Ptch1
Nectin2
Ccnd1
Usp44
Fgf6
Cand2
Rprd2
Chd7
Kank2
Mob1a
Zfp24
Cacng2
Cox5a
Umad1
Rpa3
Jund
Iqcn
Cers2
Anxa9
Shcbp1l
Mllt1
Kctd9
Cdca2
Tbc1d9
Lama5
Mtap
Arhgap24
Igf2bp1
Dab1
Nmnat3
Dvl1
Dner
Ppm1a
Csnk1a1
Trp53bp1
Kcnc1
G0s2
Zscan30
Zfp35
Shc4
Rtkn
Abcc4
Unk
Tchh
Herc6
Gm2237
Spx
Slc9a3r1
Pkm
Slc40a1
Coro2a
Slc25a17
Cluh
Srek1
Rps23rg1
Galp
Pik3cd
Castor1
Pitpnm1
Cdk2ap2
2210016F16Rik
Mnt
Nt5e
Alg13
Slc25a22
Max
Ptpdc1
Sprr2a2
Sprr2a1
Smtn
Sec31a
Hdgf
Ndfip2
Fahd2a
Abi2
Axl
Klf13
Dux
Ryr2
Trim13
Mettl9
Hells
Gpr108
Trip10
Scaf11
Atad2b
Dis3l
Proser2
Bag3
Alg9
Ggnbp2
Pdp2
Usp10
Caprin1
Hsp90ab1
Msrb2
Sall2
Zfp36l2
Pdzd2
Ran
Rps29
Cachd1
Fam102a
Hjurp
A730008H23Rik
Plekha7
Numa1
Zmynd8
Slc35d1
Esrp2
Cfhr3
Phc2
Fbxo25
Cit
Plekhf1
Hspb1
Igf2bp3
Icam1
Fam162a
Ccdc58
Zfp976
Chrna9
Polr2b
Noa1
Hhip
Chd8
Mpc2
Dcaf6
Zfp996
Spag6l
Fgfr2
Plk3
Map4k4
Denr
Prlr
Zhx1
Utp15
Ankra2
Cfap20dc
Kcnk9
Git2
Ankrd13a
Znhit2
Mrpl49
Fau
Mturn
Col27a1
Nat8f5
Gtf3c4
Ddx31
Vti1b
Utp18
Mbtd1
Chst5
Tmem161a
Gabrb3
Zkscan5
Zkscan14
Myrip
Cass4
Calm2
Csrp2
Clcn4
Krt72
Fam149a
Polr3g
Mblac2
Kcnq2
Zfp280d
Zfp319
Usb1
Otud4
Gpcpd1
Tvp23b
Morf4l2
Bcl6
Hes3
C1ql3
Rcc2
Malt1
Pcolce2
Mtfr1l
Tef
Iqcc
Ccdc28b
Dcdc2b
Il17rd
Slc30a10
Avl9
Rgl2
Mboat1
Ncoa2
Gm3173
B3gnt4
Hic1
Zfhx3
Tmem178
Plag1
Col2a1
D5Ertd579e
Shisal1
Kctd12
Csk
Kcnq1
Dhrs7b
Ubtd1
Mms19
Vpreb1
Top3b
Adamts7
Slc25a47
Sf3a1
Ccdc157
Ntng1
Mfap3l
Cux2
Bend3
Sh3tc1
B230219D22Rik
Tnfrsf8
Zfp385b
Cd7
Csnk1g2
Sh2d5
Pms1
Ormdl1
Slc35g2
Angptl4
Retreg1
Cacng7
Pard6g
2510009E07Rik