ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX018669 | ES cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◢ Rara: Average

◣ SRX018669: ES cells

◢ SRX10562781: ES cells

◢ SRX208055: ES cells

◢ SRX208062: ES cells

◢ SRX520462: F9

◢ SRX520468: F9

◢ SRX520474: F9

◢ SRX520479: F9

◢ SRX3301664: Forelimb

◢ SRX3301665: Forelimb

◢ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◢ SRX337439: Liver

◢ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◢ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

Wwox
Olfr806
Tent5c
Abhd6
Sbno2
Vmn2r102
Gcgr
Kpna1
Esr1
Csf2ra
Lrch4
Fbxo24
Stap2
Mpnd
Scn8a
Il31ra
Cbr3
Hrh2
Dchs2
Znhit1
Plod3
Rasip1
Izumo1
Pik3c2g
Edil3
Rps29
Fam227b
Dtwd1
Zscan4b
Ccdc184
Asb8
Fah
Gtf2a2
Zdhhc17
Ifna13
Klrb1b
Olfr1030
Pax2
Zfp143
Ldlr
Bbs2
Tyw1
Sbds
Lgals7
Sspn
Zfp598
2610008E11Rik
Trim12a
Awat2
Vmn2r19
Gulp1
Slc33a1
Commd1
Zrsr1
Malt1
Rbp4
Etl4
Prickle1
Rrad
Cdh16
Tgif1
Cldn34d
Pbk
Gabarapl1
Ccdc73
Olfr117
Myocd
Arl13a
Nqo2
Rmi2
Ipo11
Six6
Oasl1
Nemf
Lurap1l
Fgf22
Ct55
Col17a1
Grm7
Olfr389
Ezhip
Olfr620
Olfr619
Shoc2
Bbip1
Pnpla8
2510009E07Rik
Dhcr7
Klhl29
Tmigd1
Rin2
Plekhg1
Nfil3
Frat1
Tmem43
Chchd4
Cyp2t4
Zfp810
Tmem265
Acsl4
Taar7a
Tram1
Myoz3
Tmem108
Zbtb12
Sirpb1c
Olfr1219
Calr3
1700030K09Rik
Thbs3
Mtx1
Naa11
Hip1
Vmn1r13
Olfr99
Tacstd2
Gm4925
Arl1
Mroh7
Rps12
Ankar
Car5a
Rps6
Zfp1
Creb1
Eprs
Kbtbd3
Nudcd2
Hmmr
Lhx5
Dcaf5
BC034090
Zfp607a
Dgat1
Tmem249
Kdm3b
Mppe1
Fezf1
Taco1
Prkdc
Gm20594
Ddx20
Slx4ip
Anapc15
Pold4
Obi1
Olfr1158
Ms4a1
Ctxn3
Pth
Olfr850
Olfr805
Olfr594
Vmn2r42
Gm14595
Gm14590
Hoxd3
Wls
Trim34b
Timm8a1
St8sia4
Hoxd4
Gm7972
1810037I17Rik
Lsm14a
Uba3
Arl6ip5
Per2
Ovol2
Mup9
Aven
Wiz
Vps8
2700062C07Rik
Ergic1
Rab7
Susd1
Mup20
Naa50
Atp6v1a
Fis1
Nudt18
Arhgap18
Dpysl5
Rbks
Babam2
Pcdhga12
Tmem125
Itgb2
Tle4
Tmem267
Dgka
Akap13
Pja1
Zfp110
Selenoo
Nrg1
Tnfrsf9
1700125H20Rik
Olfr1008
Krtap3-2
A930009A15Rik
Zscan4f
Vmn2r12
Olfr281
Fyb2
Zscan4c
S100a3
Olfr729
Olfr728
Olfr46
Olfr1351
Tmbim6
Rad18
Rpl38
Mmp25
Plekhb1
Abl1
Saraf
Nbeal1
Senp8
Myo9a
Tmem132d
Egln3
Rnf220
Anpep
Cd1d1
Rps9
Abr
Opa1
Ubp1
Stx11
Snx10
Snurf
Snrpn
Coa4
Zfp748
Dtx3
Arhgef25
Slc38a10
Hunk
Gm10639
Proca1
Adcy9
Zfp148
Ptpn13
Hpx
Zfp263
C130073F10Rik
Cdrt4
Ambra1
Spdye4a
Olfr482
Psip1
Olfr1197
Cracdl
Hmox2
Bptf
Ttc26
Cdc25a
Npm2
Elf2
Ky
Clcn4
Ctf2
Trrap
Cdc20b
Pcbp1
Cdh12
Zfp866
Elavl2
Fyco1
Mtmr6
Adipor2
Letmd1
Psmb2
Knop1
Iqck
Spata33
Chmp1a
Dcaf10
Ncmap
Rusc1
Pidd1
Slc25a22
Baz1b
Foxp1
Rxrb
Col11a2
Denr
Slc15a1
H4c8
H2ac10
Calr
Eapp
Tex14
Gabarapl2
Adgra2
Fbxw7
Akirin2
Tmem181a
Tomm5
Hivep3
Efnb3
Gpx4
Ints3
Kcnk5
Bcl2a1a
Aqp3
Fubp3
Hoxb13
H4c3
H1f6
Mtf2
Oxnad1
Dph3
Tmem33
Rarb
Cdx1
Mkrn1
Xylb
H3c7
Cdk15
Socs3
Bcl2a1b
Znfx1
Notch4
Cyp26a1
H4c2
Trim29
Ilf2
Tmem191c
BC107364
Prdx6
Enpp4
H3c6
H4c4
H2bc6
Taf13
Olfr180
H3c2
H3f3b
Rdm1
Tfrc
Brwd1
Bcl2a1d
Slc35g3
Polr2a
Cidea
Capns1
Mafa
Tcp11
Pspn
Alkbh7
Slc6a16
Cd37
H2bc9
Ksr1
Kat7
H4c1
H3c11
H2bc22
H2ac22
Cic
Mycn
Klf2
Slc43a1
H3c3
H2bc3
Ier5
H4bc24
H2bc23
H2ac24
H2ac23
H3c8
Taf12
H4c18
Ect2
Rhobtb1
H1f5
A930033H14Rik
Pmepa1
Adam5
Poldip3
Ttpal
Hspa5
Mreg
P4ha3
Taf4
H4c11
Dppa2
H3c15
H3c14
H2ac19
H2ac18
H4f16
H2aj
Cyth4
Ier2
Vgll2
Nek2
Sub1
Gnb5
Ing1
Ap3s2
Jund
Iqcn
Rnf19b
Trib3
Dusp9
Aadacl2fm1
H2ac4
Phf5a
Aco2
Mettl14
Itga5
Adgre5
Fam24b
Ifitm7
Bmerb1
Gtpbp4
Zfp827
Sgf29
Nabp1
Nodal
Rnf13
H4c9
H2bc11
H2ac11
Cd44
Nfyb
Srsf3
H2bc21
H2ac21
H2ac20
H1f2
H3c13
H2bc18
Tm7sf3
H2bc4
H2ac6
H3c1
H1f1
Sfi1
Dlg4
Fbxo6
H2ax
Gja4
Ttk
Fam53c
H4c17
Bmt2
Zdhhc18
Galnt2
H4c6
H4c12
H2bc15
H2ac15
H2bc12
H2ac12
Evi5
Foxo3
Icam1
Ppdpf
Gtf2a1
Nudt4
Gstp2
Ccin
C1qbp
Arrdc2
Dedd
H1f4
Gm3448
Gm3417
H3c4
H2bc8
H2bc7
H2ac8
H2ac7
Hspb8
Rgs18
Klf4
Hnrnpab
Plk3
Rsrp1
H3c10
H2bc14
H2bc13
H2ac13
Rarg
Slc29a1
Mymx
Btg2
Smc3
Ubb
Sumo1
Mphosph9
2810006K23Rik
Dcaf4
Asph
Hspa8
Mok
Fbxo31
Rrn3
Zbtb37
Rai1
Gm3435
Jarid2
Acp6
Mtg2
Creb3l3
Ube2o
Atp2a2
Tob1
9030025P20Rik
Ints6
Arf4
Cited2
Pitpnc1
Hoxa1
Arhgap19
Sdha
Rnd3
Ccdc127
Smarca5
Nanog
Junb
Jam2
Bcar1
Agrp
Tbc1d10b
Mylpf
Zswim8
Hrob
Guf1
Ranbp3l
Sacm1l
Pcx
Ggact
Porcn
Mbd3
Yars2
Kng2
Calm2
Hexim1
Zfp532
S1pr2
Thrsp
Slc9a1
Rpl3
Stk3
Tpm2
Ttf1
Agbl5
Rfc5
Ubxn2a
Ankrd39
Trim41
Nphs1
Olfr646
Phc1
Arl15
Gm867
Chchd10
Sde2
Atg14
Nufip2
Rnf169
Trim7
Dcpp1
Hps5
Gtf2h1
Fus
Pnp
Mybpc3
Itpk1
Resf1
Gpcpd1
Utp14b
Acsl3
Hsp90aa1
Mis18bp1
Spg20
Rnaset2b
Srsf5
Eif2s3y
Sntb2
Mbd6
Ddit3
Insig1
Dpp4
Stra8
Nudt1
Haus1
Atp5a1
Rnaset2a
Tsc22d1
Kank3
Csrnp2
Cbx4
Ppp1r10
Mrps18b
Mib2
Tmem135
Dnajb9
Uck1
Ccn4
Fut8
Sumf1
Npbwr1
Sirt4
4921539E11Rik
Fam32a
Capn3
Pbld2
Hnrnph3
Ddit4
Klf6
Zfp36l1
Psmb7
Plxdc1
Kazn
Sbk2
Calm1
Rbm14
Gm21992
Msh6
Gpx1
Hagh
Fahd1
Spred2
Sgk1
Rnf103
H4c14
Cltc
Gtf2a1l
Gtf2b
Ctsl
Nsd1
D230025D16Rik
Tro
Crlf2
Nop58
Hsp90ab1
Pyroxd1
H2-DMa
Brd2
Trim40
Raf1
Ndufs7
Aplp2
Atp1a1
Ndufa6
Gm648
Ankrd28
Jpt1
Ankrd44
Mpp7
Gadd45a
Dpysl3
Vars
Rpgrip1
D17H6S56E-5
H1f3
Coro1b
Prdx1
Actb
Mobp
Gapdh
Eif4g2
Misp3
Dgat2
AU018091
Clu
Tmem116
Mat2a
Erp29
Tubb4b
Tcte3
Ermard
BC005537
Ubr4
Id3
Gja1
Cyfip2
Dhx32
Copz1
Rab8a
Lman1
Il3ra
Kmt5b
Chd9
Trmt1
Serpinf2
Errfi1
Srsf2
Mfsd11
Gipc1
Men1
Cox17
Sf3b1
Ghdc
Eif4a1
Mknk2
Pcna
Dusp1
Cog6
Nme1
Tmem107
Arl4d
P4ha1
Ctnna3
Gucy1a2
Mcl1
Zfp979
Dhx9
Wsb1
Sema4b
H2-Bl
Arrdc3
Tnfrsf19
Ehd4
Dag1
Lipe
Trpm1
Slc12a7
Ubc
Dhx8
Atxn2
Lgals9
Tefm
Spc25
Ppp1r15b
Mllt6
G6pc2
Amd2
Amd1
Actn4
Ndufs8
Cenpm
Btg1
Hnrnpa2b1
Cbx3
Snx6
Gtf2f1
Adck5
Arl6ip1
Muc1
Faim
Wsb2
Vstm4
Ltn1
Selenbp1
Brsk1
Amacr
Zfp119a
Mrpl37
Eef2
Cyb5rl
Ago2
Clec11a
Zfp980
Hbegf
Extl1
Trp53inp1
Ftl1
Luzp1
Taar6
Agpat2
Ttc25
Tas2r134
Sema4f
Exosc5
Bckdha
Phf11d
H2bc1
H2ac1
Sertad1
Kctd5
Xrcc1
Slc38a2
Pinlyp
Vegfa
Stpg4
Sephs2
Ifrd1
Sec22c
Nfe2
Tuba4a
A630095N17Rik
Nr6a1
Slbp
Cacng6
Spg11
Ppp2r5e
Gcm2
Ddx5
Cep95
Marchf3
Afg3l1
Dmxl1
Mill1
Hjurp
A730008H23Rik
Ifna6
Cela1
Chn2
Gtf3c6
Kcnn2
Atg4d
Omp
Nsrp1
Zfand5
Taok3
Rita1
Ddx54
Uspl1
Slc38a5
Styxl1
Mdh2
Fgl2
Prmt8
Fn1
Tnrc6c
Cfap126
Ptpmt1
Lgi4
Fxyd7
Fxyd1
Tob2
Rpl11
Prdm14
Btrc
Rhob
Pabpc1
Sqstm1
Fmc1
Abcb7
Fos
Rpl26
Ppp1r3c
Skp1
Zfp710
Acly
Txlng
Itpr1
Sod1
Zfp438
Klf7
Cnga1
Eif1
Ppp3ca
Zfp600
Tpst1
Cpt1a
Elf1
Bcl11b
Vcl
U2surp
Rwdd2b
Peli1
Tlcd1
Gfod1
Rcbtb1
Dennd6a
Vamp1
Slc25a3
Etv3l
Gc
Mdm4
Sepsecs
Pigt
Megf8
Katna1
Cep43
Ankrd11
Tmem205
Ccdc159
Cat
Map4k4
BC031181
Cln8
Slc25a39
Tspan9
Ep400
Mnat1
Dhcr24
Trp53inp2
4921517D22Rik
Tmem64
Msmo1
Dnaja1
Slfn4
Maats1
Dpysl2
Spata16
Eef1a1
Chchd1
Klk8
Pitrm1
Wdr77
Hnrnph1
Atp5pb
Inmt
Rreb1
Grap
Atp6v0c
Adamts19
Fam131c
Mad2l1bp
Ptpn6
Grcc10
Ccnyl1
Mafb
Dok4
Ttc39c
Slc9a3r1
Maml1
Mfsd14a
Havcr2
Cfl2
Rpl36al
Mgat2
Epha2
P4hb
Eif4ebp2
Arhgap27
Sgpl1
Rps3
Tmem60
Phtf2
Ass1
Glul
Vgll4
Rps20
Ino80c
Jun
Trmt2a
Ranbp1
Ckb
Knl1
Sap18b
Sap18
Usp37
Plk2
Mterf1b
Cnot9
Ncl
H2-M5
Rpl23
Clic4
Snrpe
Mbtps1
Traf7
Slx1b
Bola2
Snx18
Mrpl39
Herc2
Gm36210
Pdia3
Catsper2
Pdcl3
Cebpa
Smndc1
Gm10710
Fam174c
Cirbp
Nfam1
Gfpt2
Tor1b
Ppp1r2
H2ap
H2al3
Ctnnb1
Sap30
Sirt3
Psmd13
Ttll3
Trim58
Slc22a23
Txn1
Mterf1a
Znrf1
Sirt1
Defb48
Rpl8
Commd5
Ttc41
Hsp90b1
Ankle2
Vmn2r55
Ush1g
Otop2
Myo10
Avpr1a
Kat6b
Ubap1
Impdh2
Tra2b