ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX520468 | F9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◢ Rara: Average

◢ SRX018669: ES cells

◢ SRX10562781: ES cells

◢ SRX208055: ES cells

◢ SRX208062: ES cells

◢ SRX520462: F9

◣ SRX520468: F9

◢ SRX520474: F9

◢ SRX520479: F9

◢ SRX3301664: Forelimb

◢ SRX3301665: Forelimb

◢ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◢ SRX337439: Liver

◢ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◢ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

Slc15a1
Efnb3
Bcl2a1a
Gabarapl2
Bcl2a1b
Adgra2
Aqp3
Bcl2a1d
Mtf2
Hivep3
Cdk15
Rhobtb1
A930033H14Rik
Mkrn1
Tmem181a
Kcnk5
C1qbp
Prdx6
Notch4
Ints3
Fubp3
Oxnad1
Dph3
Capns1
Tmem191c
Pmepa1
Rarb
Cidea
Cdx1
Enpp4
Sntb2
Tomm5
Hoxb13
Rpgrip1
Nanog
Cyp26a1
Abl1
Nodal
Dusp9
Tbc1d10b
Mylpf
Slc43a1
Dppa2
Calr
Kat7
Zfp827
Phf5a
Aco2
Znfx1
Klf2
Rfc5
Ifitm7
Bmerb1
Ttk
Foxo3
Ect2
Gpx4
Jam2
Dpp4
Cic
Dcaf4
Acsl4
Kng2
Itpk1
Rnf13
Mafa
Rarg
Phc1
Gja1
Cldn19
Tnfrsf19
Rai1
Tmem235
Tcp11
Foxp1
Kank3
Exosc5
Bckdha
Socs3
Porcn
Ggact
Plekhb1
Cenpm
Gm36210
Nfyb
Trmt1
Fstl3
Tm7sf3
Galnt2
Zfp532
Extl1
Phf11d
Rbks
Babam2
Wsb2
Fbxo6
Arhgap27
Sgf29
Ptk7
Nsd1
Baz1b
Uck1
Msh6
Evi5
Hps5
Gtf2h1
Ube2o
Muc1
Itga5
Ttpal
Zdhhc18
Bcar1
Tfrc
Mib2
Misp3
Ncmap
Nudt1
Kcnk4
Gipc1
Mreg
Brwd1
Cacng6
Eif4e
Znrf1
Mis18bp1
Sepsecs
Prr5
Dok4
Slc6a16
Cd37
Taok3
Hrob
Ksr1
Mok
Arhgap19
Gpr152
Cabp4
Abr
Mgat3
Lpar5
Gm867
Chchd10
Ltn1
Rwdd2b
Tmem135
Prdm14
Vash1
Odf3l1
Serpinf2
S1pr2
Ubxn2a
Fam81a
Coro1b
Ptprcap
Ghdc
Zc3h3
Atg14
Ndufa6
Zfp980
Cxcr3
Psmb7
Lgals9
Xylb
Nr6a1
Tefm
Sec22c
Ankle2
Ccdc113
Taf13
Pspn
Alkbh7
Vars
D17H6S56E-5
Bmp4
Gtpbp4
Adgre5
Dhx32
Eras
Slc29a1
Mymx
Thrsp
Spry2
Txlng
Gtf2h4
Men1
Fgf1
Crybg2
Pgbd5
Acp6
Mtg2
Fam25c
Prmt8
Smpd4
Dnajb6
Spata33
Chmp1a
Dennd6a
Crlf2
Ccdc102a
Adgrg5
Klhl34
Drd4
Cmtm7
Notum
Ankrd44
Spred2
Hspb8
Arf4
Max
Gstp2
Nphs1
Rfx2
Plk3
Tnnt1
Rab8a
Ints11
Cptp
Rxrg
Zfp979
Rnf125
Abcb7
R3hdm2
Atg9b
Abcb8
N4bp1
Kazn
Hoxa1
Agrp
Sap30
Sub1
Twistnb
Kxd1
Fkbp8
Sdha
Ccdc127
Bmt2
Dedd
Mbd6
Ddit3
Jarid2
Dock6
Ammecr1l
Lama3
Slc25a39
Ago2
Ptpmt1
Oaz2
Icam1
Trim7
Itpka
Pbld2
Hnrnph3
Zfp219
Ttll3
Ptprz1
Med13l
Zyg11a
Nupl2
Letmd1
Ttll10
4921517D22Rik
Tmem116
Erp29
Dag1
Id3
Cog6
Nudt3
Tmem125
Cpt1a
Bcl11b
Zfp985
Dnaaf3
Rab39
Slc39a2
Rbm14
Gm21992
Mllt6
Smim40
Slc35f2
U2surp
Ush1g
Otop2
H2-Bl
Atg2a
Ppp2r5b
Olfr806
Def6
Brsk1
Gm18905
Arhgef26
Nek2
Lipe
Tlcd1
Mpc1
Nek8
Hagh
Fahd1
Sall2
Pyroxd1
Irf5
Gca
Zfp57
Zfp930
Agtpbp1
Olfr157
Pidd1
Slc25a22
Ppp2r5e
Ggnbp1
Bak1
Ddc
D230025D16Rik
Dnmt3a
Cox7a1
Cdh3
Slc12a7
Fez2
Ubxn8
Gipc2
Gabbr1
Zfp280b
Zfp600
Yars
S100pbp
Mbd3
Fbln1
Nudt4
Sirt3
Psmd13
Tpst1
Fn1
Mdk
Slc25a40
Dbf4
Smim38
Tgm1
Il3ra
Taf6l
Abcc5
Ttc25
Rap1gap
Mdm4
Tspan9
Zfyve28
Cfap99
Agmat
Cst3
Mrpl37
Cyb5rl
Ass1
Col4a2
Crmp1
Zmiz1
Apobec2
Foxn4
Ttll6
Eif4ebp1
Spag9
Rap1gap2
Ubr7
Gon7
Gm20604
Tapt1
Slc12a4
Plcd1
Ppdpf
Megf11
Ms4a14
Gpm6b
Ccar1
Wwox
Cfl2
Rnf169
Rusc2
Tmem205
Ccdc159
Ldb1
Ccr4
Prx
Kifc3
Cfap20dc
Ier2
Rnf19b
Rcbtb1
Mmgt2
Lrrc75a
Sugt1
Ankrd28
Srrm1
Map7
Rps6ka1
Atp2a2
Smndc1
Kdelr3
Akirin2
Tmppe
Glb1
Cox17
Maats1
Nr2f6
Rex2
Aven
Cpsf4l
Midn
Atp5d
Hoxa4
Dpp9
Rusc1
Slx1b
Bola2
Rreb1
Tead4
S100a16
Sipa1
Slc22a21
Mfsd14a
Pde6a
Fbxo8
Cep44
Rfwd3
Rpe
Sgk1
Agtrap
Gfod1
Gpr179
C77080
Rnd3
Slc7a7
Tmem39a
Oas2
Wdr25
Wars
Trim17
H3f4
Kpna1
Dhcr24
B230307C23Rik
Fam32a
Acmsd
Ptgir
Ttll13
Zic5
Taar1
Steap3
Ttc39c
Dusp5
1810010H24Rik
Zfr
Tgds
Gpr180
Nhlh2
Ubc
Grtp1
Slc25a38
Stra8
Tmco2
Fxr1
Lyrm1
Dcun1d3
Pycr2
Vsig10
Rgs11
Chd9
Spdef
Smc3
Rfc2
Ercc4
St6galnac6
Cldn34d
Megf8
Tmem184b
BC031181
Agrn
Prr14
Tfcp2l1
Rest
Wfikkn1
BC028528
Aph1a
Gpatch3
Cndp2
Cobl
Pbx2
Gpsm3
Plcb3
Ager
Ppp1r14b
Masp2
Ablim2
Myo10
Aurkc
Eif2ak2
Col6a6
Pdk1
8030462N17Rik
Racgap1
Best3
Cox5b
Bcl2a1c
Hectd1
Resf1
Hbegf
Abhd6
Epp13
Cep70
Slc25a51
Rita1
Ddx54
Ppcdc
Lims1
Guf1
Dppa5a
Atox1
Yap1
Etnk2
Fam205a1
Plpp2
Olfr915
Slc25a36
Nr0b1
Zfp870
Ubap1
St3gal3
Ap1s1
Zfp809
Mrpl40
Hira
Aldoart2
Capn3
Rmnd5b
Gm20346
Agpat2
Zswim1
Spata25
Vmn1r1
Ncapd2
Mrpl51
Stard6
4930503L19Rik
H2ap
H2al3
Rara
Angel2
Otud5
Phactr3
Tigar
Pcmtd1
Fam120a
Tyrobp
Rnf5
Agpat1
Smyd4
Rpa1
Pik3ip1
Lman1
Kat6b
H2-Q8
H2-Q6
Afg3l1
Chordc1
Ap3b2
Tle6
Ptger1
BC048679
Parvb
Aadacl2fm1
Fam160b1
Grm4
Zswim8
Chchd1
Atp5e
Dpys
Ntng2
Mobp
Ilrun
Timm8b
Sdhd
Fbxo33
Peg12
Zfp710
Tab1
Pou5f1
Acp5
Sbk1
Slc2a3
Csrnp3
Ccnb1ip1
Aldh1b1
Insyn1
Etf1
Lama5
Alpl
Pef1
Ppp1r15b
Ccdc88b
Iars
Wnt8a
Mup4
Dleu7
Sertad1
Snx29
Pitpnc1
Wdr26
Sec24c
Zrsr2
Atg4d
Gna12
Ino80c
A930018P22Rik
Mtrr
Kyat3
Spc25
G6pc2
Spa17
Siae
Krt222
Zfp438
Eif1
Cln8
Msmo1
Zdbf2
Sod1
Gse1
Tnfrsf13c
Nkg7
Lim2
Homer3
Ppl
Vim
C1qtnf9
Ttc24
Iqgap3
Cdsn
Rbpj
Tlr5
Zadh2
Tshz1
Kcnj1
Dohh
Smim24
Gm48552
Pcyt2
Tafa4
Ndufa2
Ik
Gm45915
Pld3
2310022A10Rik
Robo4
Taf4
Rasl10b
Tdgf1
Lrrc2
Cnpy1
Csnk1e
Dennd10
Mybl2
Nupr1l
Tatdn2
Fjx1
Usp45
Tstd3
Hmgxb4
Glis2
Kcnn1
Steap2
Trpm3
Ugcg
Eml2
Ap3s2
Rnf213
Bcl3
Dab2ip
H2-M5
Cited2
Stk24
Clcn5
Fgf9
Cystm1
Atg10
Smarcd1
Tvp23b
Faah
Ankrd39
Nt5e
Fxn
Lgals3
Gabpa
Atp5j
Pigv
Lekr1
Frat1
Tmem19
Ppif
Jmy
Samm50
Usp9x
Aebp2
Slc39a14
Rras
D630039A03Rik
Sgpl1
Pdcl3
Rfc4
Rapgef3
Cdc42bpg
Trim56
Gpa33
Dusp27
Zbtb45
Prrt3
Sec1
Slc25a19
Sun1
Bhlhe40
Shisa5
Hspb7
Clcnkb
Mcm2
Gm7244
Cyp46a1
Kremen1
Arvcf
Camk1d
Pakap
Cspg4b
Knop1
Iqck
Efcab2
Trpm7
Ceacam16
Luzp1
Usp28
Bcat1
1700020D05Rik
Impa1
Pmf1
Mrpl34
Abhd8
Gmnn
H2-Q2
Rhoq
Nfe2l1
Mtfr2
Mrpl45
Cmip
Kmt2c
Vegfc
Aym1
Hsh2d
Atrx
Ppp1r10
Mrps18b
Tfr2
Pdlim1
Ankdd1a
Gm12169
Setd7
Cdk13
Dcp2
Etv5
Flcn
Ptov1
Ckb
Ciao2b
Mpv17l2
Fgfr1
Pcgf2
Erf
Cyb5r4
Stra6
Kif21a
Pdgfrb
Tmem170
Ppp6r2
B3gnt7
Ccdc33
Vmn2r102
Arih2
Cryzl2
Lrp10
Ankrd9
Qrfpr
Tsc22d4
Crtap
1700066B19Rik
Znrd2
Fam89b
Crygd
Krtap5-5
Chpt1
Ilf2
H3c11
H2bc22
H2ac22
H1f5
Spry4
Tmco6
Rcc1l
Colca2
Rpp25
Slc13a2
Rhbg
Rasl11a
Krtap31-2
Cd14
Ap1b1
Mgat4c
Chd1l
Cfap161
Slc46a1
Nemf
Cacnb3
Asap3
1700019D03Rik
Atp11a
Zfp523
Grid2ip
Stat4
Phip
Nr5a2
Elobl
Atxn2
Ppp1ccb
Ppp1cc
Foxa1
Kcnip3
Vmn1r207
Calu
Cux2
Scyl1
Tcf15
Tspan10
Nploc4
Drosha
6030458C11Rik
Nyap1
Washc1
Sema4b
9530068E07Rik
Cldn14
Nr1d2
G0s2
Gstm3
Nfam1
Rtn4rl1
Prps1
Cfap206
Fam227b
Dtwd1
Sumo1
Gdpd1
Fermt2
Kdm5b
Inip
Ankrd45
Timeless
Rcor1
1700102P08Rik
Mip
Trim29
Eif4ebp2
Zfp319
Usb1
Rps29
Gja4
Cemip2
Shf
Otp
Lrrc10b
Triml2
Tssk5
Hgh1
Amacr
Etl4
Pim3
Akap1
Trappc2l
Galns
Hexb
Skil
Ryr1
Hhip
Stxbp1
Prps2
Ly6g6e
Ly6g6d
Pim1
Themis2
Ly6g6c
Naca
Src
Cilp2
Kbtbd7
U2af1
C2cd2l
Il6st
Dpagt1
Sall4
E2f2
Lrrc25
Grk3
Tmem60
Phtf2
Pafah2
Bmp1
Rbp1
Atp2a3
Adap1
Mrpl4
Krt79
Smad6
Capza2
Ppib
Gng8
Haus1
Atp5a1
Wdr82
Map1b
BC052040
Lefty1
Gch1
Fignl1
Slc25a13
Ccdc38
Amdhd1
Aifm2
Zmym2
Slc6a1
Csf2ra
Malt1
Wdsub1
Slc14a2
Axin1
Scd1
Rsph4a
Pbk
Csde1
Polr3gl
Ankrd34a
Shld1
Gpr4
Gm14393
Mfsd3
Gpt
Naa80
Hyal1
Anpep
Dennd5a
Dhx9
Mast3
Vangl1
Clcn4
Ndufs8
Nt5dc3
Tecr
Tubg1
Retreg3
Zfp961
Nop9
Dhrs1
Anxa5
1810062G17Rik
Trem2
Pip4k2b
Xirp1
Meis2
Tor3a
Nanos3
Fgd1
Fbxo46
Bhmg1
Stk35
Mrps15
Ypel2
Tln1
Creb3
Pipox
Scg5
Ilvbl
Ppp1r9b
Uqcrc1
Gm973
Ccdc60
Ndufa4l2
Ogdh
Amt
Edn2
Bckdhb
Inppl1
Gnl3l
Copz1
Dnase2a
Anapc5
H4c1
H3c1
H1f1
Cdk17
Slc39a4
Tnfsf13