ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX018670 | mESC derived neural cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◢ Rara: Average

◢ SRX018669: ES cells

◢ SRX10562781: ES cells

◢ SRX208055: ES cells

◢ SRX208062: ES cells

◢ SRX520462: F9

◢ SRX520468: F9

◢ SRX520474: F9

◢ SRX520479: F9

◢ SRX3301664: Forelimb

◢ SRX3301665: Forelimb

◢ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◢ SRX337439: Liver

◣ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◢ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

Olfr806
Wwox
Abhd6
Sbno2
Tent5c
Vmn2r102
Gcgr
Kpna1
Esr1
Scn8a
Csf2ra
Dchs2
Stap2
Mpnd
Lrch4
Fbxo24
Hrh2
Pik3c2g
Aven
Znhit1
Plod3
Grm7
Kbtbd3
Cyp2t4
Il31ra
Ct55
Gulp1
Olfr389
Ankar
Fah
Cldn34d
Zfp598
Edil3
Gtf2a2
Zfp1
Olfr117
Myocd
Sirpb1c
Tmem132d
Cbr3
Nudcd2
Hmmr
Pbk
Plekhg1
Tmem203
Ndor1
Tmem265
Ifna13
2610008E11Rik
1810037I17Rik
Rrad
Cdh16
Olfr1219
Olfr1158
Mup20
Scgb2b26
Acsl4
Mup9
Calr3
1700030K09Rik
Lgals7
Klrb1b
Thbs3
Mtx1
Ms4a1
Ctxn3
Dntt
Col17a1
Spdye4a
Etl4
Six6
Rasip1
Izumo1
Gm20594
Zdhhc17
Rps29
Eprs
Ccdc184
Asb8
Myoz3
Trim12a
Rmi2
Ezhip
Zfp810
Naa11
Pth
Olfr1008
Lrch1
Ifna5
Slc33a1
Dok6
Nemf
Car5a
BC034090
Rbp4
Zbtb12
Rin2
Oasl1
Ddx20
Shoc2
Bbip1
Prickle1
Pax2
Tgif1
Abl1
Tmem135
Katnbl1
Lurap1l
Gm4925
Arl1
Olfr1030
Vmn2r19
Olfr620
Olfr619
Arhgap18
Crhr2
Gdap1
Senp8
Myo9a
Lhx5
Dcaf10
Mmp25
Glis2
Saraf
Tpm1
Dcaf5
Tmbim6
Abr
Zfp263
Mroh7
Mettl4
Rnf220
Stx11
Commd1
Zrsr1
Hip1
Zfp936
Creb1
Anapc15
Awat2
Gabarapl1
Zscan4b
Obi1
Arl13a
Vmn1r13
Olfr850
Krtap3-2
A930009A15Rik
Rnf180
Hipk3
Tmigd1
Ccdc73
Zfp748
Frat1
G3bp2
Klhl29
Dgat1
Tyw1
Sbds
Bptf
Per2
Tmem125
Rps12
Pold4
Dmtn
Nbeal1
Macroh2a2
Fermt3
Fgf22
Fezf1
Fam227b
Dtwd1
Cyp26a1
Zfp143
Pnpla8
Ncor1
Trappc3l
Mlf2
Tmem249
Zfp994
Elavl2
Olfr805
Olfr594
Zcchc13
Zscan4f
Vmn2r12
Zfp820
Perm1
Olfr421-ps1
Gm4836
Gm14819
Gm14632
Gm10487
Gm10486
Gm10230
Gm10147
Gm10096
Gm10058
Eda2r
Cfi
Laptm4b
Gm11487
Med15
Nrg1
Tnfrsf9
Pml
Fis1
Pcbp1
Kcnt1
Zfp148
Nqo2
Wipi1
Nudt18
Ctf2
Mrap
2510009E07Rik
Kdm3b
Ergic1
Rtkn2
Satb2
Adipor2
Psma4
AY074887
Nfil3
Mapk13
Dpep2
Ctsz
Rpl35a
Iqcg
Trappc2l
Galns
Smim13
H2-Q4
Rbks
Babam2
Tmem43
Chchd4
Ipo11
Hmox2
Taar7a
Opa1
Tmem108
Hexim2
Gcdh
Nudt7
Gpr35
Susd1
Cenpi
Olfr99
Cyp2c67
Vmn2r42
Gm14595
Gm14590
Abcb1b
Olfr281
Lratd1
Olfr482
Vmn2r60
Vmn2r6
Usp17le
Trpa1
Timm8a2
Spata46
Sh3kbp1
Pnma3
Pla1a
Otud7a
Mybpc1
Mamld1
Luzp4
Klk5
Igf2
Hdgfl1
Glrb
2010106E10Rik
Sspn
Ambra1
Zfp607a
Cd1d1
Ppfibp2
Rad18
Rsl24d1
Zan
Mta3
AW549877
Stk32b
Slc5a3
Mrps6
Taco1
Cdc20b
Slc28a3
C2cd5
Acvr1b
Syt12
Slc35f3
Ubp1
Gm10639
Coa4
Mppe1
Espl1
Snapc1
Tacstd2
Rarb
Ndufaf4
Xrcc1
Pinlyp
Polrmt
Styxl1
Mdh2
Rnf125
Rxrb
Col11a2
Ky
Pidd1
Slc25a22
Denr
Nek2
Fyco1
Tmem267
Letmd1
Rbm39
Cdx1
H2ap
H2al3
Eef2
Rasl10b
Dapk3
Supt5
Zfp566
Zfp260
Cdk12
Guf1
Hpx
Slc15a1
H4c8
H2ac10
Calr
Eapp
Tex14
Gabarapl2
Adgra2
Fbxw7
Akirin2
Tmem181a
Tomm5
Hivep3
Efnb3
Gpx4
Ints3
Plekhb1
Kcnk5
Bcl2a1a
Aqp3
Fubp3
Hoxb13
H4c3
H1f6
Mtf2
Oxnad1
Dph3
Tmem33
Mkrn1
Xylb
H3c7
Cdk15
Socs3
Bcl2a1b
Znfx1
Notch4
H4c2
Trim29
Ilf2
Tmem191c
BC107364
Prdx6
Enpp4
Clcn4
H3c6
H4c4
H2bc6
Taf13
Olfr180
H3c2
H3f3b
Rdm1
Tfrc
Brwd1
Bcl2a1d
Slc35g3
Polr2a
Cidea
Capns1
Mafa
Tcp11
Pspn
Alkbh7
Slc6a16
Cd37
H2bc9
Ksr1
Kat7
H4c1
H3c11
H2bc22
H2ac22
Cic
Mycn
Klf2
Slc43a1
H3c3
H2bc3
Ier5
H4bc24
H2bc23
H2ac24
H2ac23
H3c8
Baz1b
Taf12
H4c18
Ect2
Rhobtb1
H1f5
A930033H14Rik
Pmepa1
Adam5
Poldip3
Ttpal
Hspa5
Mreg
P4ha3
Taf4
H4c11
Dppa2
H3c15
H3c14
H2ac19
H2ac18
H4f16
H2aj
Ncmap
Cyth4
Ier2
Vgll2
Sub1
Gnb5
Ing1
Ap3s2
Jund
Iqcn
Rnf19b
Trib3
Dusp9
Aadacl2fm1
H2ac4
Phf5a
Aco2
Mettl14
Malt1
Prkdc
Itga5
Adgre5
Fam24b
Ifitm7
Bmerb1
Gtpbp4
Foxp1
Zfp827
Sgf29
Nabp1
Nodal
Rnf13
H4c9
H2bc11
H2ac11
Cd44
Nfyb
Rusc1
Srsf3
H2bc21
H2ac21
H2ac20
H1f2
H3c13
H2bc18
Tm7sf3
H2bc4
H2ac6
H3c1
H1f1
Sfi1
Dlg4
Fbxo6
H2ax
Gja4
Ttk
Fam53c
H4c17
Bmt2
Zdhhc18
Galnt2
H4c6
H4c12
H2bc15
H2ac15
H2bc12
H2ac12
Evi5
Foxo3
Icam1
Ppdpf
Gtf2a1
Nudt4
Gstp2
Ccin
C1qbp
Arrdc2
Dedd
H1f4
Gm3448
Gm3417
H3c4
H2bc8
H2bc7
H2ac8
H2ac7
Hspb8
Rgs18
Klf4
Hnrnpab
Plk3
Rsrp1
H3c10
H2bc14
H2bc13
H2ac13
Rarg
Slc29a1
Mymx
Btg2
Smc3
Ubb
Sumo1
Mphosph9
2810006K23Rik
Dcaf4
Asph
Hspa8
Mok
Fbxo31
Rrn3
Zbtb37
Rai1
Gm3435
Jarid2
Acp6
Mtg2
Creb3l3
Ube2o
Atp2a2
Tob1
9030025P20Rik
Ints6
Arf4
Cited2
Pitpnc1
Hoxa1
Arhgap19
Sdha
Rnd3
Ccdc127
Smarca5
Nanog
Junb
Jam2
Bcar1
Agrp
Tbc1d10b
Mylpf
Zswim8
Hrob
Ranbp3l
Spata33
Chmp1a
Sacm1l
Pcx
Ggact
Porcn
Mbd3
Yars2
Kng2
Calm2
Hexim1
Zfp532
S1pr2
Thrsp
Slc9a1
Rpl3
Stk3
Tpm2
Ttf1
Agbl5
Rfc5
Rab7
Ubxn2a
Ankrd39
Trim41
Nphs1
Olfr646
Phc1
Arl15
Gm867
Chchd10
Sde2
Atg14
Nufip2
Rnf169
Trim7
Dcpp1
Hps5
Gtf2h1
Fus
Pnp
Mybpc3
Itpk1
Resf1
Gpcpd1
Utp14b
Acsl3
Hsp90aa1
Mis18bp1
Spg20
Rnaset2b
Srsf5
Eif2s3y
Sntb2
Mbd6
Ddit3
Insig1
Dpp4
Stra8
Nudt1
Haus1
Atp5a1
Rnaset2a
Tsc22d1
Kank3
Csrnp2
Cbx4
Ppp1r10
Mrps18b
Mib2
Dnajb9
Uck1
Ccn4
Fut8
Sumf1
Npbwr1
Sirt4
4921539E11Rik
Fam32a
Capn3
Pbld2
Hnrnph3
Ddit4
Klf6
Zfp36l1
Psmb7
Plxdc1
Kazn
Sbk2
Calm1
Rbm14
Gm21992
Msh6
Gpx1
Hagh
Fahd1
Spred2
Sgk1
Rnf103
H4c14
Cltc
Gtf2a1l
Gtf2b
Ctsl
Nsd1
D230025D16Rik
Tro
Crlf2
Nop58
Hsp90ab1
Pyroxd1
H2-DMa
Brd2
Trim40
Raf1
Ndufs7
Aplp2
Atp1a1
Ndufa6
Gm648
Ankrd28
Jpt1
Ankrd44
Mpp7
Gadd45a
Dpysl3
Vars
Rpgrip1
D17H6S56E-5
H1f3
Coro1b
Prdx1
Actb
Mobp
Gapdh
Eif4g2
Misp3
Dgat2
AU018091
Clu
Tmem116
Mat2a
Erp29
Tubb4b
Tcte3
Ermard
BC005537
Ubr4
Id3
Gja1
Cyfip2
Dhx32
Copz1
Rab8a
Lman1
Il3ra
Kmt5b
Chd9
Trmt1
Serpinf2
Errfi1
Srsf2
Mfsd11
Gipc1
Men1
Cox17
Sf3b1
Ghdc
Eif4a1
Mknk2
Pcna
Dusp1
Cog6
Nme1
Tmem107
Arl4d
P4ha1
Ctnna3
Gucy1a2
Mcl1
Zfp979
Dhx9
Wsb1
Sema4b
H2-Bl
Arrdc3
Cdh12
Tnfrsf19
Ehd4
Dag1
Proca1
Lipe
Trpm1
Slc12a7
Ubc
Dhx8
Atxn2
Lgals9
Tefm
Spc25
Ppp1r15b
Mllt6
G6pc2
Amd2
Amd1
Actn4
Ndufs8
Cenpm
Btg1
Hnrnpa2b1
Cbx3
Snx6
Gtf2f1
Adck5
Arl6ip1
Muc1
Faim
Wsb2
Vstm4
Ltn1
Selenbp1
Brsk1
Amacr
Zfp119a
Mrpl37
Cyb5rl
Ago2
Clec11a
Zfp980
Hbegf
Extl1
Trp53inp1
Ftl1
Luzp1
Taar6
Agpat2
Ttc25
Tas2r134
Sema4f
Exosc5
Bckdha
Phf11d
H2bc1
H2ac1
Sertad1
Kctd5
Slc38a2
Vegfa
Stpg4
Sephs2
Ifrd1
Sec22c
Nfe2
Tuba4a
A630095N17Rik
Nr6a1
Slbp
Cacng6
Spg11
Ppp2r5e
Gcm2
Ddx5
Cep95
Marchf3
Afg3l1
Dmxl1
Mill1
Hjurp
A730008H23Rik
Ifna6
Cela1
Chn2
Gtf3c6
Kcnn2
Atg4d
Omp
Nsrp1
Zfand5
Taok3
Rita1
Ddx54
Uspl1
Slc38a5
Fgl2
Prmt8
Fn1
Tnrc6c
Cfap126
Ptpmt1
Lgi4
Fxyd7
Fxyd1
Tob2
Rps6
Rpl11
Prdm14
Btrc
Rhob
Pabpc1
Sqstm1
Fmc1
Abcb7
Fos
Rpl26
Ppp1r3c
Skp1
Zfp710
Acly
Txlng
Itpr1
Sod1
Zfp438
Klf7
Cnga1
Eif1
Ppp3ca
Zfp600
Tpst1
Cpt1a
Elf1
Bcl11b
Vcl
U2surp
Rwdd2b
Peli1
Tlcd1
Gfod1
Rcbtb1
Dennd6a
Vamp1
Slc25a3
Etv3l
Gc
Mdm4
Sepsecs
Pigt
Megf8
Katna1
Cep43
Ankrd11
Tmem205
Ccdc159
Cat
Map4k4
BC031181
Cln8
Slc25a39
Tspan9
Ep400
Mnat1
Dhcr24
Trp53inp2
4921517D22Rik
Tmem64
Msmo1
Dnaja1
Slfn4
Maats1
Dpysl2
Spata16
Eef1a1
Chchd1
Klk8
Pitrm1
Wdr77
Hnrnph1
Atp5pb
Inmt
Rreb1
Grap
Atp6v0c
Adamts19
Fam131c
Mad2l1bp
Ptpn6
Grcc10
Ccnyl1
Mafb
Dok4
Ttc39c
Slc9a3r1
Maml1
Mfsd14a
Havcr2
Cfl2
Rpl36al
Mgat2
Epha2
P4hb
Eif4ebp2
Arhgap27
Sgpl1
Rps3
Tmem60
Phtf2
Ass1
Glul
Vgll4
Rps20
Ino80c
Jun
Trmt2a
Ranbp1
Ckb
Knl1
Sap18b
Sap18
Usp37
Plk2
Mterf1b
Cnot9
Ncl
H2-M5
Rpl23
Clic4
Snrpe
Mbtps1
Traf7