ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10562781 | ES cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◢ Rara: Average

◢ SRX018669: ES cells

◣ SRX10562781: ES cells

◢ SRX208055: ES cells

◢ SRX208062: ES cells

◢ SRX520462: F9

◢ SRX520468: F9

◢ SRX520474: F9

◢ SRX520479: F9

◢ SRX3301664: Forelimb

◢ SRX3301665: Forelimb

◢ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◢ SRX337439: Liver

◢ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◢ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

Cldn34d
Xylb
Slc6a16
Cd37
Bcl2a1a
Tmem181a
Tomm5
Hoxb13
Cdk15
Cltc
Rbks
Babam2
Slc15a1
Gabarapl2
Gpx4
Enpp4
Cyp26a1
Crlf2
Palb2
Dctn5
Dedd
Mkrn1
Clcn4
Hivep3
Fubp3
Notch4
Mafa
Slc29a1
Mymx
Fcgr3
Ints3
Gm4981
Gm3667
Mobp
Cdx1
Psmd3
Calr
Bcl2a1b
Adgra2
Tmem191c
Dusp9
Mtf2
Cic
Cidea
Tcp11
Speer4e
Tmbim4
Rpl22
Aqp3
Agbl5
Pmepa1
Brwd1
Atp6v0c
Amdhd2
Dppa2
Brsk1
Misp3
Snrpb2
Exoc2
Zfp827
Vmn1r2
Ankrd28
Capns1
Pomt1
Kazn
Denr
Ncmap
Fbxo31
Sugp2
Armc6
Dcaf4
Vamp4
Ifitm7
Bmerb1
4921517D22Rik
C1qa
2610042L04Rik
H2-Bl
Tmem125
Slc43a1
Il3ra
Imp4
Ccdc115
Sspn
Smarca5
Gdf15
Rcn3
Ndufs7
Zfp692
Hes7
Cdsn
Bcl2a1d
Mbd3
Ttpal
H2ap
H2al3
Guf1
Exd1
Chp1
Ctnna3
Gm3739
Pidd1
Slc25a22
Arhgap19
Arrdc3
Pdcd5
Zdhhc18
Trmt2a
Ranbp1
Mok
Zfp839
Nanog
Baz1b
Itpk1
Tmem40
Themis2
Ppdpf
Resf1
Btn1a1
Mdm4
Rusc1
Sepsecs
Efnb3
Ubxn2a
Fam131c
Acp6
Trim7
Kmt5b
Mettl26
Spred2
Ube2o
Fbxo6
Jam2
Agrp
Rbsn
Ercc2
Ercc6l
Ksr1
Aloxe3
Cacng6
Phf5a
Aco2
Ilf2
Plxdc1
Ttk
Cox19
Dnase2a
Plcd3
Acbd4
Knl1
Lama5
Vps28
Rab11a
1810020O05Rik
Sfi1
Abcc10
Ttc24
Iqgap3
Tfrc
Tspan9
Dph2
B4galt2
Atp6v0b
Ubr4
Nkap
Kmt2a
Letmd1
Cenpm
Scarf1
Rilp
Dpp4
Plekhb1
Nemf
Tbc1d10b
Mylpf
Gm2237
Dux
Smarcc2
Hrob
Lamp1
Vps13d
Nphs1
Ttc25
Nodal
Oxnad1
Dph3
Rhobtb1
A930033H14Rik
Ndufs8
Thrsp
Vars
D17H6S56E-5
Nsd1
Odc1
Gins3
Kat7
Tia1
Polg
S1pr2
Steap3
Disp3
Dock6
Borcs6
Rreb1
Mreg
Kcnk5
Gm36210
Gm51573
Rps29
Foxp1
Krcc1
Ghdc
Cfap126
Cdkn2d
Gm973
Best3
H4c8
Rai1
Hoxa1
Ccdc107
Zfp978
Zfp991
Mrps15
Gm13290
Gm13289
Gm13285
Gm13272
Ifnz
Gm13276
Pspn
Alkbh7
Zfp600
Prx
Aurkb
Sycp3
Brms1
B4gat1
Icam1
Txnl4a
Gm16286
Elf1
Wbp4
Gnb2
Itga5
Spc25
G6pc2
Gm13278
Gm13277
Fmc1
Zbtb40
Gne
Gja1
Phc1
Rex2
Mis18bp1
Kctd5
Afg3l1
Unk
Znhit3
Acmsd
Cldn14
Trim41
Stard6
4930503L19Rik
Tm7sf3
Sacm1l
Speer4a
Gm10406
Rarg
Spata33
Chmp1a
Psmb7
Tmco2
Cpsf1
Ccdc113
Acp5
Usp31
Sec31b
Cacnb3
Megf11
Rgl2
Lsm5
Gm10354
Pyroxd1
Herc4
Gipc1
Ltn1
U2surp
Rwdd2b
Etfbkmt
Nipsnap2
Sec22c
Ppp3ca
Kdm8
Gm5796
Adgre5
Kank3
Tac4
C1qbp
Gm13283
Gm13286
Gm13271
Sbno2
Pik3c3
Snx12
Smim40
BC107364
Rtn4rl1
Dph1
Med16
Taf12
Zfp184
Taok3
Snx18
Suds3
H4c12
H2bc15
H2ac15
Zfp979
Lgals9
Mynn
Actrt3
Amt
Myrf
Klf2
Mtg2
Tas1r3
Mllt6
Megf8
Nkg7
Lim2
Zfp523
Rab3gap2
Speer4d
Zfp532
Nupr1l
Nek2
Tekt2
Adprhl2
Nr6a1
Fyco1
Ap1b1
Fam25c
Mettl25
Ccdc59
Sdha
Ccdc127
Insyn1
Slc35d1
Col9a2
Abcb7
Zfp809
Ncam1
Etfa
A930018P22Rik
2610301B20Rik
Snrnp70
Atp6v0d1
Atp2a2
Dok4
Ubc
Rfc5
Ankrd44
Prmt8
Abcg2
Mib2
Ccdc124
Efcc1
Slamf8
Nfyb
Uspl1
Kansl3
Fer1l5
Mfsd1
Hspb8
Lasp1
Kat6b
Poldip3
Knop1
Iqck
Srgap1
Tex14
Socs3
Dhx32
Tbrg1
Trim56
Snrpa1
Zfp984
Trim6
Npas4
Gm3448
Gm3417
9030025P20Rik
H2-Q8
H2-Q6
Prss47
Mief1
Rbm48
Pex1
Smim17
Psma2
Mrpl32
Jarid2
Lipe
Tti2
Lta4h
Sgf29
Gpcpd1
Bcl11b
H2-Q9
H2-Q7
Mtg1
Plekhg2
Plekhg4
Rarb
Cyb5r4
Atxn7l2
Sh3glb1
Max
Gm7244
Ppp1r15b
Ect2
Accsl
Ube2j2
Zfp981
Wfdc8
Wfdc6b
Tvp23b
Eif4e
Fam81a
Clpb
Slc39a3
Ndufs1
Eef1b2
Zfp990
Telo2
Ptx4
Gtpbp4
Lman1
Uqcc2
Dcaf10
Kcnb1
Gm17019
Prdx6
Ndufa6
Dcp1a
Rap1gap
Wsb2
Sumf2
Gm3752
Cc2d1a
4930432K21Rik
Tyrobp
Utp3
Ankrd45
Spink10
Fbxo38
Tmem116
Erp29
Ttll3
Extl1
Cln8
Gpatch3
Gm10130
P2rx7
Taf13
Abl1
Fus
Hagh
Fahd1
Uqcrc1
Gipc2
Trip4
Adnp
Ptcd1
Cpsf4
Ptpmt1
Meiob
Saysd1
Irf5
Cryzl2
Snrpd3
Gucd1
Agmat
Spaca6
Msh4
Aven
Muc1
Usp30
Cenps
Rrs1
Adhfe1
Cog6
Ap3s2
Ckb
Srp19
Rasl10b
Mlst8
Cdk5rap1
Crtc1
Cstf1
Aurka
Tmem107
Ceacam16
Gm35549
1810010H24Rik
Polr3e
Drg2
Ccdc88b
Gm3264
Mrs2
Cdk12
Ms4a14
Gm21190
Serpinf2
Eapp
AU041133
Hspa5
Rnase4
Ang
Ptprz1
Cct8
Mkrn3
Sppl2b
Lsm7
Cacng2
Dpys
Zfp948
N4bp1
Atxn2
1700102P08Rik
Znfx1
H3c11
H2bc22
H2ac22
Zswim8
Chchd1
Get1
H4bc24
H2bc23
H2ac24
H2ac23
H4c18
Gm3435
Preb
Tsc1
Styxl1
Mdh2
Grtp1
Man2b2
Dffb
Cep104
Pstk
Zmym4
Chpt1
Rad9b
Klhl20
Exog
Ankle2
Taco1
Vwa8
Orc5
Pcyt1a
Hemk1
6430571L13Rik
Speer4c
Gm21149
Gm21083
Impa1
Nudt15
Fam32a
Clptm1l
Rab8a
Fbxo9
Cilk1
Btbd9
Rnd3
Sema4b
Slx1b
Bola2
Mrpl39
Fignl1
Trmo
Psmb2
Cdk5rap2
Slc9a1
Tcea1
Spin2d
Fam53c
Ptp4a1
Secisbp2l
Stx12
Qrich1
Ube2f
Rnf169
Pafah2
Bglap3
Bglap2
Bcar1
Ndrg3
Aebp2
4930558K02Rik
Pigc
Sirt4
Mtdh
Adrm1
Ddx56
Tbc1d14
Pemt
Ywhae
Ogfod3
Hexdc
Gapdh
Fbxo46
Bhmg1
Med6
Wdsub1
Ddost
Slc15a4
Cnot2
Gm7762
Rps3a1
Aurkc
Trmt10c
Mrps28
Dars
Nsfl1c
Ndufaf1
H3f3c
Wdr77
Atp5pb
Man2c1
Mif
Tmem134
Aip
Eif4enif1
Dguok
Gabpb1
Hdac2
Gm21119
4930467E23Rik
Mrpl4
Ndufab1
H1f2
Slc25a40
Dbf4
Zcchc4
Syce1
Gm3411
Yipf2
Timm29
Agk
Mpc1
Btbd8
Cdk5rap3
Ccni
2010109A12Rik
Rrm1
Pex14
Tfdp1
Dpy19l4
Klhdc10
Dnm1l
Ints14
Ptpn6
Grcc10
Them6
H3c4
H2bc8
H2bc7
H2ac8
H2ac7
Dpp9
Rbck1
Tjp3
Pip5k1c
Atg14
Gm11127
Stk31
Rmnd1
Armt1
Hexa
Mdk
Rad23a
Ybey
Mcm3ap
Snx29
Mrps33
Snrnp27
Fank1
Lamtor3
Myo10
Gm13279
Gm13275
H4f16
H2aj
Zfp770
Ankrd13c
Cherp
Gabpb2
Gm3636
Gm13287
Nsun3
Vmac
Ndufa11
Nup214
Itgb1bp1
Cpsf3
Selenot
Car3
Slc26a8
Mapk14
Ufsp2
1700029J07Rik
Gtf3c5
Usp21
Nfyc
Vmn1r30
Olfr806
Abhd6
Wwox
Kpna1
Tent5c
Csf2ra
Il31ra
Vmn2r102
H2ac10
Fbxw7
Akirin2
Gcgr
Esr1
H4c3
H1f6
Tmem33
Fam227b
Dtwd1
H3c7
H4c2
Trim29
Hmox2
H3c6
H4c4
H2bc6
Olfr180
H3c2
H3f3b
Rdm1
Rasip1
Slc35g3
Polr2a
Izumo1
H2bc9
H4c1
Ifna13
Mycn
H3c3
H2bc3
Ier5
H3c8
H1f5
Adam5
Abr
P4ha3
Taf4
H4c11
H3c15
H3c14
H2ac19
H2ac18
Dchs2
Cyth4
Ier2
Vgll2
Sub1
Gnb5
Oasl1
Ing1
Jund
Iqcn
Rnf19b
Trib3
Aadacl2fm1
H2ac4
Mettl14
Malt1
Prkdc
Fam24b
Nabp1
Rnf13
H4c9
H2bc11
H2ac11
Gm20594
Cd44
Srsf3
H2bc21
H2ac21
H2ac20
Tmigd1
H3c13
H2bc18
H2bc4
H2ac6
H3c1
H1f1
Dlg4
H2ax
Gja4
H4c17
Bmt2
Galnt2
H4c6
H2bc12
H2ac12
Evi5
Foxo3
Gtf2a1
Nudt4
Gstp2
Ccin
Arrdc2
H1f4
Rgs18
Klf4
Hnrnpab
Plk3
Rsrp1
H3c10
H2bc14
H2bc13
H2ac13
Btg2
Smc3
Ubb
Sumo1
Mphosph9
2810006K23Rik
Lrch4
Fbxo24
Asph
Hspa8
Rrn3
Scn8a
Zbtb37
Creb3l3
Tob1
Ints6
Arf4
Cited2
Pitpnc1
Cbr3
Junb
Ranbp3l
Pcx
Ggact
Porcn
Acsl4
Yars2
Kng2
Calm2
Hexim1
Rpl3
Stk3
Tpm2
Ttf1
Rab7
Ankrd39
Taar7a
Olfr646
Stap2
Mpnd
Arl15
Gm867
Chchd10
Sde2
Nufip2
Dcpp1
Hps5
Gtf2h1
Pnp
Mybpc3
Utp14b
Acsl3
Hsp90aa1
Hrh2
Spg20
Rnaset2b
Srsf5
Eif2s3y
Sntb2
Mbd6
Ddit3
Insig1
Zfp143
Stra8
Nudt1
Haus1
Atp5a1
Rnaset2a
Tsc22d1
Csrnp2
Cbx4
Ppp1r10
Mrps18b
Rps12
Tmem135
Dnajb9
Uck1
Ccn4
Fut8
Sumf1
Npbwr1
4921539E11Rik
Capn3
Pbld2
Hnrnph3
Ddit4
Klf6
Zfp36l1
Sbk2
Calm1
Rbm14
Gm21992
Msh6
Gpx1
Sgk1
Rnf103
H4c14
Gtf2a1l
Gtf2b
Ctsl
D230025D16Rik
Tro
Nop58
Hsp90ab1
H2-DMa
Brd2
Trim40
Raf1
Aplp2
Atp1a1
Gm648
Jpt1
Mpp7
Gadd45a
Dpysl3
Rpgrip1
H1f3
Coro1b
Prdx1
Actb
Eif4g2
Dgat2
AU018091
Clu
Mat2a
Tubb4b
Tcte3
Ermard
BC005537
Id3
Cyfip2
Copz1
Chd9
Trmt1
Errfi1
Srsf2
Mfsd11
Men1
Cox17
Sf3b1
Eif4a1
Mknk2
Pcna
Dusp1
Nme1
Arl4d
P4ha1
Gucy1a2
Mcl1
Dhx9
Wsb1
Cdh12
Tnfrsf19
Ehd4
Dag1
Dgat1
Proca1
Trpm1
Slc12a7
Dhx8
Tefm
Amd2
Amd1
Actn4
Btg1
Hnrnpa2b1
Cbx3
Snx6
Gtf2f1