ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX208062 | ES cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◢ Rara: Average

◢ SRX018669: ES cells

◢ SRX10562781: ES cells

◢ SRX208055: ES cells

◣ SRX208062: ES cells

◢ SRX520462: F9

◢ SRX520468: F9

◢ SRX520474: F9

◢ SRX520479: F9

◢ SRX3301664: Forelimb

◢ SRX3301665: Forelimb

◢ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◢ SRX337439: Liver

◢ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◢ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

Eapp
Tex14
H3c6
H3c7
H2bc9
BC107364
H3c3
H2bc3
H4c2
H3c2
H2ac4
H2bc12
H2ac12
H4c11
H3c10
H2bc14
H2bc13
H2ac13
H4c3
H1f6
H3c11
H2bc22
H2ac22
H1f5
H3c4
H2bc8
H2bc7
H2ac8
H2ac7
H3f3b
H2bc4
H2ac6
H4bc24
H2bc23
H2ac24
H2ac23
H4c18
H4c8
H2ac10
H3c8
Slc35g3
Polr2a
Gm3448
Gm3417
Gm3435
H4c12
H2bc15
H2ac15
H4c9
H2bc11
H2ac11
H4c1
H3c1
H1f1
Olfr806
H4c4
H2bc6
H3c13
H2bc18
Rdm1
H2bc1
H2ac1
Abhd6
9030025P20Rik
Sspn
H2bc21
H2ac21
H2ac20
H4c17
Taf12
Tcte3
Ermard
H1f4
H4c6
H1f3
Poldip3
H1f2
H2ax
Sfi1
Gtf2a1
H4f16
H2aj
Taf4
Zbtb37
Ubb
H3c15
H3c14
H2ac19
H2ac18
Ptpn6
Grcc10
Mpp7
Gtf3c6
Tob1
Sirt4
Errfi1
Ing1
Atp1b2
Srsf2
Mfsd11
Ints6
Rps12
Rsrp1
Fam53c
Jpt1
Il31ra
Calr
Eif4a1
Hnrnpab
Slc9a1
Jund
Iqcn
Mphosph9
2810006K23Rik
Gtf2f1
Npm1
Aadacl2fm1
Clcn4
Smc3
Arrdc2
Tmem107
Csrnp2
Pnp
H4c14
Eif4g2
Wwox
Tex19.1
Klf6
BC005537
Cdk12
Rcl1
Nabp1
Rpl27
Kpna1
Ifrd1
Rack1
Ftl1
Rpl15
Nkiras1
Sgf29
Gfpt2
Smarca5
Rpl3
Ccdc110
Ccn2
Urgcp
Dhx9
Nufip2
Hexim1
Hspa5
Ier2
Pik3r3
Epha4
Insig1
Ddx5
Cep95
Ier5l
Slc25a4
Sf3b1
Pcna
Wsb1
Hsp90ab1
Trpm3
Eif4a2
Tfrc
Srsf3
Sde2
Gadd45a
Dchs2
Gm10710
Matr3
Smurf2
Dlg3
Mbtps1
Cbr3
Dhx8
Sqstm1
Tti2
Nbeal2
Ccdc12
Mcl1
Lsm14a
Taf4b
Dnajb9
Arl4d
Rpl13
Rpl6
Zc3h10
Rpl41
Taar7a
Taar6
Rpl23
Lipo3
Sub1
Afg3l1
Zfp119b
Wiz
Mat2a
Spg11
Naca
Kansl2
Shoc2
Bbip1
Gls
Nasp
Caprin2
Utp14b
Acsl3
Hnrnph1
Snrpg
Pafah1b1
Tmpo
Btg2
Nme1
Hoxb13
Cdc5l
Hspa8
Pkm
Mrpl39
Ddit4
Fut8
Nop58
Taf13
Ptpa
Crat
Cbx8
Snf8
Peli1
Kpna2
Hsp90aa1
Plscr4
Marchf3
Pabpc1
Txn1
H2aw
Eef1e1
Rps24
Polr3a
Med6
Zfp119a
Snrpb
Rpl9
Lias
Srsf1
Dynll1
Gm13057
Gm13040
Lman1
Pdhx
Apip
Ppia
Rpl26
Unk
Uhrf1bp1l
Znfx1
H2-DMa
Brd2
Mknk2
Tsc22d1
Pbk
Arc
Tmem270
Pole4
Fyco1
Rps2
Rnf151
Ndufb10
Kifap3
Ksr1
Gtf2b
Hmgb2
Arl6ip1
Zfp959
Kat6a
Mre11a
Ankrd49
Mest
Fus
Hjurp
A730008H23Rik
Sod1
Rnf149
Cabp2
Zfp943
Zfp942
Fam174c
Cirbp
Ap1g1
Nfat5
Fam98b
Aqp8
Rps27a
Clhc1
Zwilch
Rpl4
Rtcb
Clec11a
Por
Tcea1
Ctnnb1
Dnajb14
H2az1
Thoc1
Maml1
Ncl
Drg1
Rtn4
Olfr1495
Hpf1
Pigg
Rps20
Ints5
Lbhd1
1810009A15Rik
Atp1a1
Amd2
Amd1
Btg1
Styxl1
Mdh2
Selenot
Upf3a
Ppil4
Rps15a
Impdh2
Srsf5
Mterf1b
B4galt3
Psme4
Srrm2
Magee2
Ppp1r15a
Plekha4
Nxf1
2610042L04Rik
Cftr
Tubb4b
Dusp1
Slc36a1
Tial1
H2bu2
Prdx1
Snx18
Rps26
Zfp36l1
Hnrnpa2b1
Cbx3
Ier5
Zfand5
Rps6
Rpl7a
Med22
Mak16
Cldn34c4
Elp5
Ctdnep1
Rita1
Ddx54
G3bp1
Dars
Fntb
Kcnh1
Gapdh
Prss35
Zfp981
Sephs2
Vcpkmt
Sertad2
Cop1
Klf2
Cited2
Ulk2
Rcn2
Rps8
Clu
Dgat1
Gm3667
Ahctf1
Gpx1
Arrdc3
Hsd3b5
Dhx30
Calm1
Rhob
Traf7
Timm22
Tuba1c
Dtx4
Ppp1r8
Pts
Tmub1
Fastk
Aqr
Tbrg1
Canx
Sost
Acly
Tmem79
Smg5
Appl1
Ube2s
Ankfy1
Cyp17a1
Ccnt1
4930415O20Rik
Slc2a1
Cdh1
Spin2d
Snx5
Mgme1
Cep295
Olfr142
Scfd1
Ubac2
Esr1
Cltc
Ppcdc
Stmn1
Gm10573
Rpl35a
Iqcg
Tma16
Tent5c
Calm2
Agpat2
Srp54c
Il23r
Oxnad1
Dph3
Pou5f1
Pex3
Adat2
Rbbp7
Ptcd3
Polr1a
Tnrc6c
Ncoa4
Pradc1
Cct7
Tmprss11d
Cep43
Scnn1g
Rpl19
Cacnb1
Zfp982
Yeats4
Srp19
Hspa9
Nudt1
Setd5
Crlf3
Ly6d
Mrm2
Rnf19b
Klf7
Slc25a3
Rps3a1
Ptma
Mtpap
Mtf2
Ppp1r10
Mrps18b
Mylip
Adpgk
Zfp963
Hif1an
Spata20
Mttp
Psma4
AY074887
Trmt10a
Ttc12
Lyzl6
Fxn
Mrpl35
Rrp15
Srp68
Glul
Tra2b
Ccnq
Srcap
Atf2
Rccd1
Olfr1154
Rnaset2b
Rnaset2a
Eef2
Taf1d
4931406C07Rik
Tkfc
Ddb1
Rab33b
Rapgef6
Tsg101
Atp6v0a1
Tdp2
Acot13
Prpsap2
Dus4l
Cog5
Rnf7
Crls1
Jade1
Olfr215
Rpl12
Lrsam1
Psmd5
Cutal
Recql4
Lrrc14
Map3k3
Ddx52
1600014C23Rik
Pdia3
Catsper2
Ubr3
Bclaf1
Sphk2
Rpl18
Fam83e
Cabyr
Oog1
Actb
Rps7
Add3
Itpa
Ddrgk1
Deaf1
Arl15
Trp53inp1
Smim7
Rnps1
Adss
Ppan
Ptrhd1
Cenpo
Cdkn2aip
Tcta
Rhoa
Opa1
Tm2d1
Kdm4d
Cwc15
Bcl11b
Rpl8
Commd5
Med21
Zfp207
Nprl3
Kansl1
Psme3
Rfc3
Olfr294
Mybpc3
Rps3
Rplp0
Wdr82
Usp53
Arl4c
Hnrnpc
Guk1
Snrpe
Rps19
Rspo3
Skp1
Rps9
Tcf15
Ints12
Gstcd
Ccdc86
Strap
Ccnyl1
Eif3a
Mapk1
Ppm1b
Ythdc1
Ephb3
Dynlt1b
Haus1
Atp5a1
Rpl17
Rbm39
Hectd4
Ptpn2
Ahcyl1
Kat8
Eif5a
Zfp143
Uspl1
Fos
Cpsf1
Vps52
Rps18
B3galt4
Polg2
AU041133
Nphp1
Mtln
Gk5
Carmil1
Nemf
Kctd5
Nubp1
Myh10
Spc25
G6pc2
Paxip1
Zswim3
Acot8
Taok1
Ptpru
Cfl1
Sptbn1
Slfn14
Sac3d1
Nup62
Il4i1b
Atf5
Nek2
Rab8a
Slc38a2
Napepld
Dnajb1
Atf6
Serbp1
Ergic2
Haus4
Rnf34
Zscan21
Rptor
Olfr362
Mterf1a
Acer2
Pmf1
Zcchc17
Snrnp40
Blmh
Timm17a
Rpl31
4931414P19Rik
Eef1g
Trappc1
Kcnab3
Cntrob
Vmn1r48
Dnaja1
Etf1
Edrf1
Fnbp1
Slc18a1
Atp6v1b2
Ttc17
Zfp654
Cggbp1
Smc5
Zfp97
Nifk
Plxdc1
Slc25a39
Rab13
Rps27rt
Rps27
Gadd45b
Dbnl
Mdh1b
Fastkd2
Sp2
Ska3
Mrpl57
Olfr1388
Gtf2a2
Odc1
Kntc1
Pcif1
Foxc2
Ube2m
Chmp2a
Mmaa
5730455P16Rik
Cdc42se2
Mrpl17
Zfp433
Gm32687
Cct4
Pigq
Nhlrc4
Copb2
N6amt1
Smndc1
Tagap1
Tnrc6b
Clcn3
Bdh2
Rnasel
Slbp
Pfdn2
Nit1
Fbxw2
Ubap2l
4933434E20Rik
Shroom4
Atxn2l
Kat7
Kifc3
Mrps28
Actg1
Set
Rps4x
Prr14l
Coq3
Uqcrb
Gm10767
Pir
Rab7
Eef1a1
Atp6v0c
Hmga1b
Hmga1
Amdhd2
Csde1
Pgrmc1
Ren2
Ren1
Chmp5
Bag1
Rbm25
Slc5a5
Rpl18a
Rad23a
Prdm10
Kifc5b
Ipo7
Ogfod1
Nudt21
Gosr2
Slc4a11
Aplp2
Sertad1
Snrnp70
Pelp1
Bbs10
Zfp330
Rif1
Ckap2
Irgm1
Ints10
Gpx4
Txnip
Ddx3x
Gm15517
Etfrf1
Casc1
Zfp866
Cks2
Id1
Mlh1
Epm2aip1
Cct5
Atpsckmt
Ndufb1
Cpsf2
Col1a1
Arl2bp
Cops3
Zc3h13
Slc6a4
Ubl7
Kctd20
Rbm34
Tmem168
Slirp
Nrp
Alkbh1
Rchy1
Ccna2
Aldh3a2
Rnd3
Ankrd11
Fasn
Smyd4
Rpa1
Dip2b
Paip2
Tasor
Pcnt
Sdad1
Mtif2
Kdm3a
Ccng1
Arhgef7
Micos10
Zfp868
Rpl39
Zfp882
Cpm
Polr3gl
Ankrd34a
Birc6
Rnaseh1
Olfr38
Rbis
Ifna13
Mettl14
Fah
Ppp1r3c
Pcnp
Megf9
Uqcrq
Gdf9
Rc3h2
Fmr1
Uchl1
Dcaf12
Vps4a
Rpl36
Micos13
Atad2
Srsf11
Lrrc40
Kbtbd8
Dcp1b
Nqo1
Zfp988
Nfyb
Ankrd39
Kmt5b
Dmxl1
Esyt2
Gbe1
Luc7l
Rps23
Srek1
Xpc
Lsm3
Map3k7
Ppih
Ube2a
Tm2d3
Tbpl1
Nmt1
Zfp512
Spata31d1d
Arf3
Rbm14
Gm21992
Sirt1
Atp5e
Glce
Atp5b
Spg7
Atp1b1
Eloc
Mrpl30
Mitd1
Polr3d
Selenof
Hs2st1
Ccni
2010109A12Rik
Exosc6
Cdk1
Fancd2
Emc3
Cdkn1a
Hspa1l
Hspa1a
Mrs2
Txnrd1
Fndc8
Trir
Get3
Ssr3
Chrac1
Ints13
Fgfr1op2
Rad1
Brix1
Gtf2h3
Eif2b1
Tmco1
Ercc6l2
Ccnb1
Tars2
Ccm2
Fam161b
Coq6
Hddc2
Jun
Hnrnpu
Serinc3
Dnajc19
Ptpn12
Ywhae
Eci1
Tgfbrap1
AI597479
Iba57
Oxa1l
Akip1
Nelfcd
Kit
Sae1
Raf1
Actn4
Plk2
Mrpl1
Tgoln2
Tgoln1
Srp54a
Tmem126a
Slc7a5
Clk1
Angel2
Srp54b
Sf1
Wnk1
Atp9b
Sugct
Mplkip
Psmd2
Tbcd
Ube2l3
Tmx3
Micalcl
Zfp955b
Rbm3
Smn1
Zdhhc7
Gata3
Slc49a4
Hspbap1
Chic2
BC031181
Zfp638
Snu13
B230219D22Rik
Fscn1
Nat10
2610507B11Rik
Cfap97
Ngdn
Utp23
Dhx37
Slc25a45
Frmd8
Rab17
Usp37
Cnot9
Atp5g3
Fam43a
Rab5b
Ipo11
Tra2a
Cyc1
Pnn
Zfp655
Rrm2b
Wac
Stxbp4
Cox11
Dele1
Aars2
Mapk1ip1l
Gpbp1
Pole2
Mllt10
Tbx3
Fabp12
Rcc1
Tmem131
Rad9b
Adam17
Commd8
1600014C10Rik
Septin11
Olfr773
Atf7ip2
Il20ra
Nom1
Zfp160
Arl6
Eif1
Morc3
Mfsd8
Laptm4a
Rpl30
Suz12
Fkbp3
Fancm
Cdk11b
Mrps31
Tuba1a
Fbxo5
Nsrp1
Denr
Id2
Sugp1
Mau2
Bcl2l13
Nsun4