ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX118693 | mESC derived neural cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◢ Rara: Average

◢ SRX018669: ES cells

◢ SRX10562781: ES cells

◢ SRX208055: ES cells

◢ SRX208062: ES cells

◢ SRX520462: F9

◢ SRX520468: F9

◢ SRX520474: F9

◢ SRX520479: F9

◢ SRX3301664: Forelimb

◢ SRX3301665: Forelimb

◢ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◢ SRX337439: Liver

◢ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◣ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

Olfr806
Abhd6
Wwox
Fam227b
Dtwd1
Nemf
Fbxw7
Malt1
Akirin2
Tent5c
Tmem33
Rasip1
Izumo1
Olfr180
P4ha3
Znhit1
Plod3
Vstm4
Rps29
Prkdc
Ilf2
Mycn
Npbwr1
Gcgr
Ctnna3
Gcm2
Tpm2
Kpna1
Adam5
Dcpp1
Sacm1l
Cbr3
Trim41
Olfr1168
Cdrt4
Fbxo31
Naaa
Gnb5
Npy5r
Esr1
Klf4
Sbno2
Nup153
Fam71f1
Ptgdr
4930563M21Rik
Rnase4
Ang
Fam24b
Cldn34d
Il31ra
Grap
Clcn4
Vgll2
Ccin
Scn8a
Ifna6
H4c2
H4c1
H3c1
H1f1
Dlg4
Trim29
Rilpl2
Snrnp35
Proca1
Ccn4
Tmigd1
Cyth4
Trib3
Lrch4
Fbxo24
Gja4
H4c8
H2ac10
Sspn
Pde12
Mettl14
Tro
AU018091
Kcnn2
Slc5a6
Atraid
Enpep
Cad
Gucy1a2
Sumf1
Best2
Trim17
H3f4
Cd44
Vmn2r102
Tmem125
Hps5
Gtf2h1
Cnga1
Tgfb2
Wdr3
Gdap2
Cables1
Ak5
Sbk2
Zfp692
Timm22
Slfn4
Npm2
Btrc
Fmc1
Amotl1
Harbi1
Atg13
Cyp26a1
Rgs18
Creb3l3
Limch1
Mkrn2os
Fbxo8
Cep44
Abt1
Rad51ap1
D6Wsu163e
Aurkb
Fndc7
Rara
Ccdc58
Ppp1r37
Setd1a
Cfap126
Ppl
Trim58
Hes7
Aloxe3
Dcaf5
Brpf1
Gm648
Adamts19
Rrn3
Tbcel
Hemgn
Ccnt2
Dpysl3
Armc8
Safb2
Safb
Rbks
Babam2
Npas4
H4f16
H2aj
H4c4
H2bc6
Plekhb1
Hoxa1
Exosc2
Rasl10b
Pidd1
Slc25a22
Gpatch8
Dlgap3
Calr
Ube2b
Cdkl3
Atxn2
Csf2ra
Slc15a1
Eapp
Tex14
Gabarapl2
Adgra2
Tmem181a
Tomm5
Hivep3
Efnb3
Gpx4
Ints3
Kcnk5
Bcl2a1a
Aqp3
Fubp3
Hoxb13
H4c3
H1f6
Mtf2
Oxnad1
Dph3
Rarb
Cdx1
Mkrn1
Xylb
H3c7
Cdk15
Socs3
Bcl2a1b
Znfx1
Notch4
Hmox2
Tmem191c
BC107364
Prdx6
Enpp4
H3c6
Taf13
H3c2
H3f3b
Rdm1
Tfrc
Brwd1
Abl1
Bcl2a1d
Slc35g3
Polr2a
Cidea
Capns1
Mafa
Tcp11
Pspn
Alkbh7
Slc6a16
Cd37
H2bc9
Ksr1
Kat7
Ifna13
H3c11
H2bc22
H2ac22
Cic
Klf2
Slc43a1
H3c3
H2bc3
Ier5
H4bc24
H2bc23
H2ac24
H2ac23
H3c8
Baz1b
Taf12
H4c18
Ect2
Rhobtb1
H1f5
A930033H14Rik
Pmepa1
Poldip3
Abr
Ttpal
Hspa5
Mreg
Taf4
H4c11
Dppa2
H3c15
H3c14
H2ac19
H2ac18
Ncmap
Dchs2
Ier2
Nek2
Sub1
Oasl1
Ing1
Ap3s2
Jund
Iqcn
Rnf19b
Dusp9
Aadacl2fm1
H2ac4
Phf5a
Aco2
Itga5
Adgre5
Ifitm7
Bmerb1
Gtpbp4
Foxp1
Zfp827
Sgf29
Nabp1
Nodal
Rnf13
H4c9
H2bc11
H2ac11
Gm20594
Nfyb
Rusc1
Srsf3
H2bc21
H2ac21
H2ac20
H1f2
H3c13
H2bc18
Tm7sf3
H2bc4
H2ac6
Sfi1
Fbxo6
H2ax
Ttk
Fam53c
H4c17
Bmt2
Zdhhc18
Galnt2
H4c6
H4c12
H2bc15
H2ac15
H2bc12
H2ac12
Evi5
Foxo3
Icam1
Ppdpf
Gtf2a1
Nudt4
Gstp2
C1qbp
Arrdc2
Dedd
H1f4
Gm3448
Gm3417
H3c4
H2bc8
H2bc7
H2ac8
H2ac7
Hspb8
Hnrnpab
Plk3
Rsrp1
H3c10
H2bc14
H2bc13
H2ac13
Rarg
Slc29a1
Mymx
Btg2
Smc3
Ubb
Sumo1
Mphosph9
2810006K23Rik
Dcaf4
Asph
Hspa8
Mok
Zbtb37
Rai1
Gm3435
Jarid2
Acp6
Mtg2
Ube2o
Atp2a2
Tob1
9030025P20Rik
Ints6
Arf4
Cited2
Pitpnc1
Arhgap19
Sdha
Rnd3
Ccdc127
Smarca5
Nanog
Junb
Jam2
Bcar1
Agrp
Tbc1d10b
Mylpf
Zswim8
Hrob
Guf1
Ranbp3l
Spata33
Chmp1a
Pcx
Ggact
Porcn
Acsl4
Mbd3
Yars2
Kng2
Calm2
Hexim1
Zfp532
S1pr2
Thrsp
Slc9a1
Rpl3
Stk3
Ttf1
Agbl5
Rfc5
Rab7
Ubxn2a
Ankrd39
Taar7a
Nphs1
Olfr646
Letmd1
Stap2
Phc1
Mpnd
Arl15
Gm867
Chchd10
Sde2
Atg14
Nufip2
Rnf169
Trim7
Fus
Pnp
Mybpc3
Itpk1
Resf1
Gpcpd1
Utp14b
Acsl3
Hsp90aa1
Mis18bp1
Hrh2
Spg20
Rnaset2b
Srsf5
Eif2s3y
Sntb2
Mbd6
Ddit3
Insig1
Dpp4
Zfp143
Stra8
Nudt1
Haus1
Atp5a1
Rnaset2a
Tsc22d1
Kank3
Csrnp2
Cbx4
Ppp1r10
Mrps18b
Rps12
Mib2
Tmem135
Dnajb9
Uck1
Fut8
Sirt4
4921539E11Rik
Fam32a
Capn3
Pbld2
Hnrnph3
Ddit4
Klf6
Zfp36l1
Psmb7
Plxdc1
Aven
Kazn
Calm1
Rbm14
Gm21992
Msh6
Gpx1
Hagh
Fahd1
Spred2
Sgk1
Rnf103
H4c14
Cltc
Gtf2a1l
Gtf2b
Ctsl
Nsd1
D230025D16Rik
Crlf2
Nop58
Hsp90ab1
Pyroxd1
H2-DMa
Brd2
Trim40
Raf1
Ndufs7
Aplp2
Atp1a1
Ndufa6
Ankrd28
Jpt1
Ankrd44
Mpp7
Gadd45a
Vars
Rpgrip1
D17H6S56E-5
H1f3
Coro1b
Prdx1
Actb
Mobp
Gapdh
Eif4g2
Misp3
Dgat2
Clu
Tmem116
Mat2a
Erp29
Tubb4b
Tcte3
Ermard
BC005537
Ubr4
Id3
Gja1
Cyfip2
Dhx32
Copz1
Rab8a
Lman1
Il3ra
Kmt5b
Chd9
Trmt1
Serpinf2
Errfi1
Srsf2
Mfsd11
Gipc1
Men1
Cox17
Sf3b1
Ghdc
Eif4a1
Mknk2
Pcna
Dusp1
Cog6
Nme1
Tmem107
Arl4d
P4ha1
Mcl1
Zfp979
Dhx9
Wsb1
Sema4b
H2-Bl
Arrdc3
Cdh12
Tnfrsf19
Ehd4
Dag1
Dgat1
Lipe
Trpm1
Slc12a7
Ubc
Dhx8
Lgals9
Tefm
Spc25
Ppp1r15b
Mllt6
G6pc2
Amd2
Amd1
Actn4
Ndufs8
Cenpm
Btg1
Hnrnpa2b1
Cbx3
Snx6
Gtf2f1
Adck5
Arl6ip1
Muc1
Faim
Wsb2
Ltn1
Selenbp1
Brsk1
Amacr
Zfp119a
Mrpl37
Eef2
Cyb5rl
Ago2
Clec11a
Zfp980
Hbegf
Extl1
Trp53inp1
Ftl1
Luzp1
Taar6
Agpat2
Ttc25
Tas2r134
Sema4f
Exosc5
Bckdha
Phf11d
H2bc1
H2ac1
Sertad1
Kctd5
Xrcc1
Slc38a2
Pinlyp
Vegfa
Stpg4
Sephs2
Ifrd1
Sec22c
Nfe2
Tuba4a
A630095N17Rik
Nr6a1
Slbp
Cacng6
Spg11
Ppp2r5e
Zfp598
Ddx5
Cep95
Marchf3
Afg3l1
Gtf2a2
Dmxl1
Mill1
Hjurp
A730008H23Rik
Cela1
Chn2
Gtf3c6
Atg4d
Omp
Nsrp1
Zfand5
Taok3
Rita1
Ddx54
Uspl1
Slc38a5
Styxl1
Mdh2
Fgl2
Prmt8
Fn1
Tnrc6c
Ptpmt1
Lgi4
Fxyd7
Fxyd1
Fah
Tob2
Rps6
Rpl11
Prdm14
Rhob
Pabpc1
Sqstm1
Abcb7
Fos
Rpl26
Ppp1r3c
Skp1
Zfp710
Acly
Txlng
Itpr1
Sod1
Zfp438
Klf7
Pbk
Eif1
Ppp3ca
Zfp600
Tpst1
Cpt1a
Elf1
Bcl11b
Vcl
U2surp
Rwdd2b
Peli1
Tlcd1
Gfod1
Rcbtb1
Dennd6a
Vamp1
Slc25a3
Etv3l
Gc
Mdm4
Sepsecs
Pigt
Megf8
Katna1
Cep43
Ankrd11
Tmem205
Ccdc159
Cat
Nudcd2
Hmmr
Eprs
Map4k4
BC031181
Cln8
Slc25a39
Tspan9
Ep400
Mnat1
Dhcr24
Trp53inp2
Fyco1
4921517D22Rik
Tmem64
Msmo1
Dnaja1
Maats1
Dpysl2
Spata16
Eef1a1
Chchd1
Klk8
Pitrm1
Wdr77
Hnrnph1
Atp5pb
Inmt
Rreb1
Atp6v0c
Fam131c
Mad2l1bp
Shoc2
Bbip1
Ptpn6
Grcc10
Ccnyl1
Mafb
Dok4
Ttc39c
Slc9a3r1
Maml1
Mfsd14a
Havcr2
Cfl2
Rpl36al
Mgat2
Epha2
P4hb
Eif4ebp2
Arhgap27
Ddx20
Sgpl1
Rps3
Tmem60
Phtf2
Ass1
Glul
Vgll4
Rps20
Ino80c
Jun
Trmt2a
Ranbp1
Ckb
Knl1
Sap18b
Sap18
Usp37
Plk2
Mterf1b
Cnot9
Ncl
H2-M5
Rpl23
Clic4
Snrpe
Mbtps1
Traf7
Slx1b
Bola2
Snx18
Denr
Mrpl39
Herc2
Gm36210
Pdia3
Catsper2
Pdcl3
Cebpa
Smndc1
Gm10710
Fam174c
Cirbp
Nfam1
Gfpt2
Tor1b
Ppp1r2
H2ap
H2al3
Ctnnb1
Sap30
Sirt3
Psmd13
Ttll3
Slc22a23
Txn1
Mterf1a
Znrf1
Sirt1
Defb48
Rpl8
Commd5
Ttc41
Hsp90b1
Ankle2
Vmn2r55
Ush1g
Otop2
Myo10
Avpr1a
Kat6b
Ubap1
Impdh2
Tra2b
Cdkn2aip
Idi1
Frat1
Cdkn1a
Tti2
Pnpla8
Rab13
Ipmk
Cisd1
St3gal3
Sec22b
Phactr3
Nup50
Il12rb2
Pbx2
Mpc1
Gria3
Gpsm3
Dcaf10
Baiap2
Trpm3
Fam25c
Rps9
Rnf125
Odc1
Muc5ac
Frmd6
Zfp1
Ubr3
Fasn
Cpsf1
Dnajb6
Il1b
Tcta
Rhoa
Tvp23b
Mrpl44
Ppp1r15a
Plekha4
Ccdc113
Prr5
Ncor1
Foxp2
Cxcl5
Spry2
Mertk
Tmem235
Susd6
Gnai3
Cpm
Hhex
Epb41
Arg1
Urgcp
Hs3st3b1
Eif4e
Pcmtd1
Lilr4b
Orai1
Gls
Gm4981
Arvcf
Tmem79
Tmbim6
Smg5
Olfr1128
Atp5e
Tsc22d2
Max
Caap1
Gabrb3
Otub2
Ccdc102a
Adgrg5
Ndel1
Atp1a4
Cdh20
Ammecr1l
Map1lc3b
Slc25a30
Exd1
Chp1
Napepld
Insyn1
Acp5
Nkg7
Lim2
Gnl2
Hnrnpu
Gca
Sesn2
Rpl17
Mrpl21
Ighmbp2
Gpr141
Paxip1
Fam207a
Dpp9
Slc5a3
Slc44a3
Mrps6
Hmga1b
Hmga1
Uqcrc1
Olfr1396
Klf10
Zmiz1
Por
Myo1d
Erf
Slc25a51
Pdhx
Nxf1
Apip
Klhl21
Gas1
Txnip
Mllt10
Kifc3
Fdx1
Cep85
Rxrb
Mrpl1
Pnma2
Mylip
Id2
H2-Q8
H2-Q6
Dock6
Sh3yl1
Acp1
Lsm14a
Kcnk4
4932438A13Rik
Zfp219
Ncapd2
Mrpl51
Chordc1
Mrps28
Ints11
Cptp
Abhd17c
Eepd1
Dusp5
Chchd2
Zfyve28
Hspa1l
Hspa1a
Cfap99
Pgbd5
Depdc1a
Acer2
Nfkbia
Dnajb1