ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10448664 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◣ SRX10448664: HeLa

◢ SRX10448665: HeLa

◢ SRX10448666: HeLa

◢ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

MTRNR2L2
ZC3H10
PGK1
FLOT1
H2BC11
H2AC11
MTRNR2L8
CCDC200
H2BC4
H2AC6
PHF1
MAZ
DVL2
CHMP2A
MSH4
SYCE2
DHPS
SLC38A2
H1-4
H2BC5
SNX16
DALRD3
H3C15
H3C14
B3GALT4
H2AC19
H2AC18
H4-16
CD68
NAT10
C6orf226
H4C12
ATAT1
SIX5
C18orf32
WDR74
H4C3
H4C2
H2BC12
H2AC12
ZBTB45
H4C11
RAD23A
SYNRG
PSMG1
EDC4
KRBA2
NDUFB10
ARFGAP2
JMJD7-PLA2G4B
JMJD7
C19orf53
SUMF2
H2BC21
H2AC20
DNAJB14
DNAJC9
PRKAG1
SLC35E3
GPAA1
COX18
VPS28
RIT1
ZNF34
ABTB1
CLN8
H3C7
RGL2
DAPK3
CCDC24
SLC50A1
NRAS
CDK11B
CDK11A
PDCD2L
GRAMD2A
VTI1B
SNAPC5
FAM228B
SF3B6
RPS15A
UPF3A
H2BC17
H2AC17
MRPL28
RCE1
H2AC21
NAT14
HSD17B8
CCDC34
ZBTB12
POLG2
PRRT2
IKBKG
G6PD
KMT5B
H2BC8
H2AC8
MYG1
PDE4A
ZFX
UBTF
VEZF1
H1-2
PHLDA1
MAML1
ADAMTS10
SECISBP2
ATP5F1E
GTF2A2
H3C2
H2AC4
CCDC107
PIP5KL1
FAM131A
TMEM230
CYRIB
CXorf38
SCRIB
DHRS11
H3C4
NADSYN1
MAPKBP1
HMCES
WDR97
THOC6
HCFC1R1
COX20
WBP1
TRIM37
ARL6IP4
AKAP8
POMZP3
FLOT2
ZNF446
GGA2
YY1
SCAMP3
CUL7
ORAI3
GANAB
WDR6
MFSD3
IDI1
PYGO2
LOC101928120
MTA2
RRP36
H3C13
H2BC18
GPN2
FUT11
H4C5
C6orf47
GSTO2
ANTKMT
CDK16
AMDHD2
ANAPC4
E2F3
TOM1
H2BC13
H2AC13
H3C10
GCN1
SCFD1
FAM156B
TAPBP
FAM156A
STUB1
SH3BGRL3
TUSC2
SLC12A6
ALOXE3
MAPK8IP3
ELK1
TLCD1
DPH7
ZNHIT2
ZNF584
ROPN1L
SEC14L1
CENPA
MVB12A
SNAP47
MRPL53
ICA1L
ROMO1
C17orf49
LRRC24
ABHD10
HMGN2
PRKRIP1
ZNF581
ISY1-RAB43
ISY1
NOLC1
GNE
TMEM134
ZNF580
NPM3
ZFP36L1
SIRT7
NDST2
HDAC10
PLPP5
MAD1L1
GMPPB
H4C9
C5orf24
ZNF653
OSTC
STYX
TEDC2
MOV10
CDH24
H2BC15
H2AC15
TMEM132A
PRMT3
DNAJC4
TBCD
CEMP1
SRSF11
H2BC7
H2AC7
ADAT1
SSH3
RILP
SP3
PIM2
H4C1
H3C1
PCBP4
EPN1
MFN1
H4C14
DYRK1B
CELF1
GATD3B
GATD3A
DECR2
CCDC97
DDAH2
KLHL11
INPP5K
MDP1
WDR90
TAF10
TMEM179B
SRSF4
EHBP1L1
TCTEX1D2
PDF
POLB
PPP1R15B
H4C15
MYL6
RAB5B
CISD3
NME3
SPATC1L
NR3C1
ADK
CSNK1G1
VWA7
DLG4
ACADVL
FNBP1
MLX
C16orf46
NOL7
TUBD1
RPS6KB1
TTC33
VPS4A
CLIC3
SPOUT1
TUT1
TBK1
MMP24OS
MMP24-AS1-EDEM2
KIF2C
FASTK
CTNNAL1
GPS2
SLC25A17
NFATC3
C8orf76
DONSON
NAA80
HYAL3
C11orf91
BAZ2A
XRN1
LARP1
CRK
NUMBL
CEP192
CAPNS1
SNX14
KLC2
JMJD8
GET4
BAG2
CASP6
SENP3
DMPK
MST1
FBXO31
MAP1LC3B
ST3GAL3
DCAKD
STAG1
C19orf71
RBM4
ABCB6
NUDT17
TNS2
NOXO1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SELENOO
RASD1
POLD1
H3C8
ZNF35
TAOK2
MCCD1
NXF1
INPP5E
NECAB3
SELENOH
H4C8
RABGEF1
FAM83E
TFPT
PRPF31
NOP2
PLEC
LLGL2
RNF225
POMT1
DPP3
C7orf26
MLH3
CACNB1
SURF6
IAH1
ANKRD12
URGCP
URGCP-MRPS24
TLCD2
PIDD1
ACOX3
PSMB8
NANOS1
IGF1R
LRP2BP
ANKRD37
TTLL3
SLC35A2
MAN2C1
HAX1
CELSR3
C12orf57
TSPAN31
SLC25A10
MROH6
ZNF865
RSRC1
WDR62
THAP8
ANKRD39
C5orf15
MPHOSPH8
TIMM13
TENT4A
DPM2
PYGM
SLC25A42
MRI1
CS
TXN2
PTCH1
PFN2
TIGD3
PRR7
CRELD1
PLEKHN1
ABCF3
WDR27
C6orf120
TEX22
PRAF2
PABPN1
GDI1
ANP32B
RRM1
ZNF517
RCC2
ZNF335
MAPKAPK5
TSN
RABL2B
RABL2A
SRD5A1
NSUN2
POLR3F
DZANK1
CACTIN
NVL
DYNC1LI2
NUP85
ICE1
VDAC2
IPO13
RWDD1
NME6
OAZ3
REXO1
MRPS7
GGA3
C19orf48
PSMD12
LYRM4
FARS2
SLC35B1
NCLN
SUCLG1
ZNF576
IRGQ
SUDS3
HSPA9
CAPRIN1
EFTUD2
CCDC103
UBE2I
RBBP5
PSMG2
GOSR2
CEP76
UPF2
POLR2E
EXOSC5
BCKDHA
DCTN1
VARS1
BLCAP
MRPL11
MRPS5
NUP205
HADHB
HADHA
STAM2
CDC73
ACTR10
COX7A2L
PSMD1
POLR2J3
TSNAX
PAK1IP1
C6orf52
SEC61B
COMMD1
CCT4
STAM
SART3
ISCU
SKP1
PI4KB
RABGGTB
SUPV3L1
USP1
PDAP1
BUD31
PES1
MRPL40
HIRA
NDUFA4
PCBP1
FAM174C
ZRANB2
FARSB
ATP5MG
EPN2
KMT2A
RPL21
PTGES2
TAF9
RAD17
AK6
TM9SF1
SELENOF
HS2ST1
EIF4ENIF1
ZNF276
EIF2S3
BRWD1
PNO1
PDHX
APIP
DDX39B
VPS9D1
MRPL24
AXDND1
GADD45GIP1
PCBD2
SEC31A
EXOSC6
VARS2
PIP4K2B
RPS27A
CLHC1
PNMA1
ZNF513
CCDC138
ANAPC7
GOLGA5
BAG6
APOM
RCOR3
CD320
TBCK
AIMP1
RXYLT1
TMED1
MRPL38
MRTO4
EMC1
SMC2
CCDC85B
ECI1
YJU2
FDX2
IMPDH2
RPS23
ATP6AP1L
H3-3A
TTC8
FADS2
PIN4
RHOT2
PWP2
LOC102724159
ARF3
LAMP1
SCO2
GLRX2
MATR3
DPH6
ULK3
NDUFA10
LMNB1
SRRT
RPL35A
IQCG
USP21
BICRA
TOB2
GTF3C4
DDX31
CSKMT
C11orf98
NDUFS3
KBTBD4
THOC5
NAPRT
FAM104A
C17orf80
RABGAP1
CRTC2
RBKS
BABAM2
AGO3
DENR
KIF27
BCAP29
TSC1
GFI1B
POLR2C
CNPY2
TRIM41
MEMO1
RPL7
RDH10
CALM2
ENAH
GAGE2A
DENND4B
CDK12
PPFIA4
AP3M1
SRCAP
LOC730183
LRP6
ADNP
RPN1
POM121C
PACS1
ATXN2
TMPPE
GLB1
PROSER1
NHLRC3
LRRC37A3
WDR24
SFT2D3
IRF2BP2
RPS12
GTF2IRD2B
GTF2IRD2
PATZ1
ROGDI
TLL2
NUDT4B
NUDT4
CSRNP2
SAMD1
TUBGCP6
MLXIP
H2BU1
EIF4A1
ANKLE2
GINS2
OTUD7B
PAF1
MED29
MAP3K12
TBC1D13
PNRC1
ATXN7L2
LBR
DPY19L4
SF3B3
COG4
TARS3
EIF2D
HSPA1B
UFM1
TTYH2
TRIM45
NAXE
MTMR10
DRAP1
C11orf68
STMP1
MORC3
IFRD2
GPX1
FBXO4
ZNF341
ACTN4
ZNF398
CMTR1
RBM39
DNAJC21
XPNPEP3
ST13
NPRL3
MRPL12
SETD5
NUDT16L1
APTX
RICTOR
H2AW
C8orf37
CCDC130
POLDIP3
CUL9
SOD2
LONP1
CATSPERD
ZBTB2
C8orf82
PHIP
C7orf25
TP53BP2
GPR137
MADD
CTNNB1
MT2A
EGLN1
DGKZ
HYI
METTL8
DCAF17
C17orf75
TRIM3
SRA1
SFXN4
CLK3
HNRNPF
MEPCE
OVCA2
PAXBP1
MIF4GD
DERA
RASA4B
YAP1
RUVBL1
PURA
MORF4L1
TLE3
JPT2
ADARB1
TFAP4
PPP3CB
HAGHL
TXLNA
RNF166
CTU2
ALKBH5
RRM2
ASXL1
MRM1
HNRNPU
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
DNAJB4
NFAT5
FIGN
TSFM
STRIP1
CCAR2
NDUFS7
PHF10
LUC7L2
GABARAP
ZNF76
PRRC2B
ANKRD54
ACVR2B
RFX1
KLF12
ATP6V0B
UFSP1
CHAF1B
KIAA2026
NDUFB2
CYC1
TRAP1
CAMK2N2
PMF1-BGLAP
PMF1
COMT
CACFD1
RUFY2
DIDO1
FAM199X
DESI2
PCDH9
PRKDC
MCM4
B4GALT7
FBXL3
ZMIZ2
QSER1
RAB4A
KMT2D
ATAD2
RAB23
RAB1B
MTF2
PKM
ZNF862
ZNF48
COA6
SMG5
FAM118A
GBA
PPP1R37
NOXA1
EEFSEC
SQSTM1
PCBP2
SMN2
SMN1
TMEM267
ZNF383
N4BP2
PRDX1
CYB561D1
RABIF
PRSS27
PDE4DIP
IBA57
JADE2
TSPAN10
NPLOC4
LRRC73
TRIM65
KAT8
SLC39A13
ATXN2L
RIPK1
RPS29
LRR1
C1QBP
SMYD2
POGZ
MTHFS
JAK1
C1orf56
AK1
THAP3
RRAGC
GORAB
PPP1CC
CALM1
CDKN2A
CCDC78
SIPA1
NBPF1
AKT3
FAM219B
BNIP3
ZNF451
FANCC
EDEM1
KAT5
AQP11
CHEK1
ZNF251
PANK1
UNC119
KAT6A
DNAJB12
ZCWPW1
KPNB1
HIPK1
TULP3
MCOLN1
AMZ2
C16orf71
ANKS3
SEC61A2
ATAD3A
WBP1L
ZFAND6
MFSD14A
LMBR1
KANSL1
HOXA5
ERCC6L2
DIAPH1
TNKS1BP1
COX19
PATJ
ACADM
NEIL1
RPL37
MTIF3
IL10RB
GFER
PAK2
TAF2
FBXW4
MTRF1L
NCOA2
SSX2IP
MYNN
POP5
MKRN2
ATPAF1
DNLZ
FARP2
FAM117B
ETV6
TMEM150A
BUD13
SCAI
NBPF15
CPSF1
ARSG
KDM3B
DDX56
SGF29
SF1
UBA2
CHD8
ACBD6
HMGN1
NCBP3
CHD1L
TPTEP2-CSNK1E
LATS1
ARHGEF12
SUPT4H1
WASHC2C
SEMA4B
DSTYK
CCDC88A
B3GAT3
SLC6A9
TRAF4
NOTCH2
NUB1
ECHS1
ERLIN1
SORT1
ARHGEF1
ZFP64
CNP
GOLM2
AKAP1
ABL2
SPCS1
GLT8D1
POLR3D
GOLGA1
DDX59
PDCD6
NCOA7
JMJD4
TONSL
LAMTOR3
PYCR2
FAM207A
E4F1
AGK
PHF8
KMT2C
WDR37
TFAM
B3GALNT2
ABCA7
PRKACB
FBXW5
ARPC3
KLF6
ING1
CDC6
ACBD3
STC2
TOMM20
GTPBP3
ANO8
ZC3H6
EHMT1
VCP
SCAP
H2AX
NAA35
TRAPPC8
THEM4
PDCD2
ACTR8
SETD6
ROM1
NARF
EML3
ZSWIM8
FAM76B
CUL1
CEP57
RNF220
LIN9
SEMA4C
OSGEP
HNRNPUL1
APEX1
ADIPOR1
TM2D3
SMARCD1
PARP1
MNT
IMPA1
CYBA
CIRBP
PRKAB2
PMM1
ANKH
TCF3
NFIB
BOLA3
PPP1CA
NR1D2
NKIRAS1
LRRC40
ZBTB10
LIFR
PANK3
MTX1
STX18
ZZZ3
UBE2Z
STIMATE-MUSTN1
STIMATE
BRAF
C2
RSAD1
MED26