ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5441331 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX10448664: HeLa

◢ SRX10448665: HeLa

◢ SRX10448666: HeLa

◢ SRX10448667: HeLa

◢ SRX5441330: HeLa

◣ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

RABL2B
ZNF335
RABL2A
TSN
SRD5A1
NSUN2
MAPKAPK5
DYNC1LI2
NVL
CACTIN
ICE1
NUP85
PSMD12
MRPS7
GGA3
POLR3F
DZANK1
VDAC2
GOSR2
NCLN
REXO1
OAZ3
C19orf48
HSPA9
BLCAP
NME6
IPO13
POLR2E
SUCLG1
SUDS3
UBE2I
CAPRIN1
EXOSC5
BCKDHA
SLC35B1
ZNF576
IRGQ
EFTUD2
CCDC103
RWDD1
MRPS5
ACTR10
RBBP5
COX7A2L
VTI1B
PSMD1
DCTN1
CDC73
PES1
SEC61B
COMMD1
CCT4
SART3
ISCU
RABGGTB
HADHB
HADHA
UPF2
LYRM4
FARS2
TSNAX
PSMG2
CEP76
FARSB
NDUFA4
PDAP1
BUD31
STAM
MRPL11
PI4KB
SUPV3L1
NUP205
STAM2
SKP1
PNO1
USP1
RPL21
ZRANB2
FLOT1
PAK1IP1
C6orf52
ATP5MG
DVL2
SELENOF
HS2ST1
GOLGA5
B3GALT4
VARS1
GADD45GIP1
KRBA2
TAF9
RAD17
AK6
ANAPC7
PTGES2
SNAPC5
EIF2S3
RPS27A
CLHC1
PDHX
APIP
DDX39B
AXDND1
MTRNR2L8
EIF4ENIF1
MRTO4
EMC1
SMC2
PIN4
ZC3H10
TTC8
RPL35A
IQCG
TMED1
TM9SF1
C6orf226
RPS23
ATP6AP1L
VPS28
H4C14
PCBP1
ATP5F1E
ADK
AP3M1
H4C15
DPH6
SF3B3
COG4
SCRIB
H2BC4
H2AC6
NDUFA10
RXYLT1
SUMF2
AMDHD2
BICRA
SYCE2
RBKS
BABAM2
NRAS
MRPL38
H4C12
H4C11
RPS12
GLRX2
DENR
UFM1
WDR74
XPNPEP3
ST13
DGKZ
C18orf32
PYGO2
LOC101928120
FAM104A
C17orf80
BAG6
APOM
ARFGAP2
CD68
CDK12
EDC4
RNF225
PAF1
MED29
MRPL24
GORAB
RPN1
PROSER1
NHLRC3
SYNRG
RBM39
PCBD2
ANKLE2
ALKBH5
H3C15
H3C14
HSPA1B
MTRNR2L2
H4C3
GTF3C4
DDX31
H1-2
CHMP2A
DNAJC9
GET4
H2BC21
H2AC20
H2AC21
C17orf49
H1-4
H2BC5
PRKAG1
EXOSC6
ABTB1
RGL2
DDAH2
SIRT7
LAMP1
INPP5E
RPS29
LRR1
SRSF11
LRRC40
ZNF34
ZNF276
VPS9D1
TBCK
AIMP1
PHF1
CUL7
CMTR1
RPL7
RDH10
NDST2
CISD3
POLG2
STK36
RNF25
FAM131A
MEPCE
ZCWPW1
EPN1
PRRT2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
CNPY2
BNIP3
RIT1
LMAN2
VARS2
PRKRIP1
RHOT2
FAM83E
RPS10-NUDT3
RPS10
C19orf53
SURF6
NAPRT
TRAP1
MYG1
ZBTB45
ZNF580
BTBD10
TTC33
RAD23A
GPAA1
ZNF383
ATAT1
MSH4
TIMM13
RRP36
CCDC34
POLDIP3
SMG5
SEC11C
DNAJB14
WDR90
RICTOR
AGAP11
GCN1
HMCES
SLC39A13
HOXA5
MOV10
ARHGAP11A-SCG5
ARHGAP11A
MMP24OS
MMP24-AS1-EDEM2
OSGEP
APEX1
C19orf71
H2AC19
H2AC18
DHRS11
TMPPE
GLB1
CD320
RCOR3
CLUAP1
SECISBP2
POLR2J3
ARF3
SPCS1
GLT8D1
POLD1
ECI1
SF3A3
FUT11
ROGDI
DPH7
VWA7
LRRC37A3
H4C8
MRPL34
SLC35E3
ATXN2
CENPBD1
H4-16
LLGL2
GABARAP
STYXL1
MDH2
MRPL53
SLC25A10
H3C13
H2BC18
HDAC10
GGA2
JMJD8
C8orf82
NAT10
JMJD7-PLA2G4B
JMJD7
CELF1
SLC25A11
RNF167
TRIP4
STRIP1
POMZP3
COMT
ZMIZ2
PSMD5
DHPS
SCAMP3
WDR6
EIF4A1
DALRD3
FAM174C
CCAR2
H1-5
H2AC16
CYBA
SLC26A11
GPS2
TBC1D13
MAZ
BAZ2A
SRRT
NDUFS3
KBTBD4
NDUFS7
NUF2
MAP2K2
ARHGEF1
PUF60
COMMD2
PNMA1
H3C2
RPL37
H2BC11
H2AC11
MRPL40
HIRA
GTF2IRD2B
GTF2IRD2
ADPRHL1
HSD17B8
CRELD1
H4C1
H3C1
NOP14
GRK4
SIX5
DRAP1
C11orf68
LIFR
CDK11B
CDK11A
NECAB3
SELENOH
ABCB6
TSPAN10
NPLOC4
XRN1
PDCD6
BSCL2
LRP6
CS
DPY19L4
TCHP
C5orf24
TATDN3
NSL1
NPAS4
MAD1L1
RCE1
WDR70
H4C2
MAPK8IP3
TMEM43
CHCHD4
SCAP
PAIP1
POLR2J
ARHGAP12
GRAMD2A
ZNF446
PIGO
AURKAIP1
ISG20
GPN2
ZNF653
ERGIC2
LBR
FLOT2
H4C9
ZNF341
RNF166
CTU2
C12orf57
SDE2
C7orf26
ZNF770
TAOK2
PMF1-BGLAP
PMF1
TRIP13
BRD9
SDHA
CCDC127
AKAP8
NXF1
DNAJB12
ABCF1
KIF2C
CCDC138
TMEM267
FBXW9
VPS50
HEPACAM2
NME3
THOC5
NFAT5
NCBP3
DIDO1
SMN2
SMN1
SHTN1
SCAMP5
SSBP1
CSNK1G1
ERCC6L2
H2BC12
H2AC12
MATR3
CUL9
ECHS1
GOLM2
WDR47
TMEM39B
H4C5
CHD8
BCAP29
POLR2C
PCBP2
EHMT1
CRTC2
C16orf46
PACS1
GBA
RAB5B
COX20
ZDHHC23
RUVBL1
ASXL1
MTF2
EEFSEC
MARCHF6
CCDC43
TOM1
ORAI3
PURA
ANKFY1
NEURL2
CTSA
ARMH3
NELFA
GSTA4
CTNNB1
DSTYK
TOMM20
SMDT1
GRB2
LPCAT1
CCDC86
MYO18A
THEM4
IREB2
TRMT2A
RANBP1
ZNF511
TUBGCP2
DECR2
TXN2
EIF2D
C6orf47
SPATC1L
GAA
MTIF2
RAB3IL1
ROPN1L
MEMO1
OTUD7B
B4GALT7
SKA3
MRPL57
TLCD1
PTCD1
CPSF4
LRRC59
TAF2
CDC5L
MDM4
DCXR
SLC15A4
RMI1
HNRNPK
TCF3
AHRR
OSMR
NOLC1
ANTKMT
NOP2
DRG2
EXOC3
PDCL3
PRICKLE4
FRS3
ILF2
MAPKBP1
TUBGCP6
ATXN7L2
RAD9A
EIF3F
MRPS23
CYRIB
ULK3
CPSF1
NAA80
HYAL3
PCBP4
NDUFB2
CHD1L
PRKAB2
TRAF4
NT5C
TAS1R1
NOL9
TRIM37
GPX1
WDR31
RPP40
ZNF286A
BRIX1
BHLHE40
NSFL1C
KLHL12
TGOLN2
THOC6
HCFC1R1
JOSD2
ICMT
CLCN7
SLC29A1
GSTO2
TSFM
MCOLN1
CASP2
RNPS1
VEZF1
SNAP47
MADD
CALM1
JMJD4
AGL
AFF4
SLC50A1
ZNF76
BAX
CLPTM1L
CYB561
GATD3B
GATD3A
GNE
TOMM6
ZNF583
USP21
CSRNP2
DCP1A
CD63
HASPIN
IRF9
SSX2IP
ANKRD13C
LTBR
ENDOV
NOTCH2
EIF4H
HMGB1
USPL1
TDP2
ACOT13
SFXN4
SYT7
GABPB2
RIPK1
RSAD1
WDR11
MED1
PLEKHG2
MAN2C1
CCDC130
AKAP1
H3C8
CEP350
SLC45A4
UPF3A
PABPN1
ABCF3
CEMP1
RBL1
SNTB2
FKBP5
SIRT4
NOC3L
AGO3
SUGCT
MPLKIP
TMEM179B
ATAD2
RABIF
AMZ2
B3GAT3
FAM162A
CCDC58
WASHC2A
TMEM170A
GADD45A
HNRNPA1L2
CXorf38
PRDX1
CIAO3
FIS1
NR4A1
ATP6V1H
ENOSF1
DNAJC25-GNG10
DNAJC25
NAA60
MBTPS2
H2BC8
H2AC8
MLXIP
FAM156B
FAM156A
SLC52A2
FBXL6
BRWD1
LARP1
YAP1
TIPIN
CHAF1A
CAPNS1
INPP5K
KAT6A
GEMIN7
CBWD5
CBWD3
CBWD6
MTERF4
NOC4L
DDX51
DAGLA
ERBB3
SH3BGRL3
HAX1
RASA4B
YARS1
S100PBP
RRP1
MET
PGAM5
MRPS18C
HELQ
KMT2A
ZNHIT2
TONSL
HNRNPH3
AMACR
GPRC5A
PBLD
MVB12A
CLK3
FOXJ3
SCAND1
HIBADH
CCDC24
MRPL28
SRA1
WDR62
THAP8
TAB3
PPP6C
SGPP1
VPS4A
NUDT4B
NUDT4
DDX56
QRICH1
RRP8
ILK
POLG
ATXN1L
GANAB
TCTEX1D2
STX18
TMEM222
RPP21
TMEM68
TGS1
GTF2H2C
GTF2H2C_2
YOD1
RBM4
ZNF581
PPFIA4
TMEM101
PUS7
NTMT1
DPY19L3
NADK
NUP133
SMPD1
H3C7
PIP4K2B
MTA2
POP5
DCAF10
MRPL58
CLCC1
ABCA3
FOXRED2
SUPT16H
JUND
HELLS
MLX
MRPL12
JPT2
PMM1
NELFB
RRAS2
KIF21A
SNAP29
PI4KA
TSKU
TTC17
JRK
PPP6R1
ZBTB7A
NEK2
C10orf143
TAF10
PDF
MROH6
CNOT6
MED23
BANP
TBL3
SEC31A
FDX2
ADAT1
IPO9
CBX2
NANOS1
DENND4B
DNLZ
COX5A
ZNF131
UHRF2
TMEM132A
ZFP36L1
ZFX
MTARC1
H3-2
GGA1
BPTF
ZYG11A
LRRC8D
ARFGAP3
TAF13
VCP
SLC24A1
COG2
UBE2J2
SPIRE2
PSMG4
AKIRIN1
ZBED3
ADGRL1
NAPA
IDI1
WDR37
TBL1X
HDHD2
TJP1
CYBC1
KCNK1
GTF2A2
SRSF4
MRM1
ADAMTS10
LUC7L2
FAM207A
TM7SF3
BICD1
PARVA
L3HYPDH
ZBED5
SNX29
JKAMP
C16orf70
RFX1
MKRN2
ZFAT
NFYC
PGAP6
CDK5RAP1
ARHGEF5
OTULIN
TJP3
TRA2B
MRPL45
MRPL3
CELSR3
HNRNPUL1
GALE
TOR1AIP1
ZNF346
NADSYN1
MDP1
ZNF865
GXYLT1
DYRK3
DNTTIP2
ADAMTSL4
DUS3L
TOB2
PDE4DIP
BUD13
PTPN4
B9D1
RGP1
GBA2
ZFP1
MIS18A
ATR
MAPK7
CCNT1
SSH1
ZNF317
FAM228B
SF3B6
FADS2
ADARB1
KPNB1
IMPA1
MED16
PSMA1
ARL6IP1
CSKMT
C11orf98
FAM118A
ATAD3A
GOLGA1
ZNF623
AXL
TBCB
POLR2I
NTAQ1
EFHC1
LMNB1
WDR24
TULP3
NAA35
CIRBP
SLC39A3
TUBGCP3
ZCCHC14
ATF7-NPFF
ATF7
TEFM
TRIM65
DIAPH1
COX19
BOLA3
ZZZ3
ZFYVE9
MIEN1
MTG1
PNPLA6
TSR3
GNPTG
ERLIN2
ZNF720
ZNF497
USP36
ST6GALNAC2
PPM1H
TTI2
SRP19
KHSRP
DONSON
TEDC2
SRCAP
LOC730183
SIPA1
CNP
NUTF2
CENPT
RC3H2
SLC44A1
CZIB
MAK16
ZNF594
DHX8
NUP155
GTF2H3
EIF2B1
ACAD9
KIF27
FBXO4
KAT8
MARCHF7
SPSB2
RCCD1
DUS1L
SMIM10L1
PRH1-TAS2R14
PRH1
PKN2
ZFP64
NSMCE4A
CANX
ACSF3
FAM53B
CDC16
SNX24
ZSCAN12
PLD6
GMPPB
AGBL2
POLE4
HSD3B7
NDUFS6
DIP2B
SNRPE
EXOSC10
SLC25A45
PPP2R1A
TBK1
H2BC17
H2AC17
BAG2
RABGAP1
EHBP1L1
SLC25A42
IBA57
TNKS1BP1
PPP5D1
CALM3
MRTFB
AKAP10
TRMT61B
TIMELESS
SNRPC
APTX
KLC2
ACADM
MRI1
ERLIN1
ANKRD40
IPO4
CPLANE1
NIPBL
MICALL1
ZFAND1
VKORC1
PMS2
AIMP2
CCDC134
ZNF546
VCPKMT
IMPDH2
SELENOO
MCUR1
SLC35C2
PSEN2
DR1