ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10448665 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX10448664: HeLa

◣ SRX10448665: HeLa

◢ SRX10448666: HeLa

◢ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

PGK1
ZC3H10
MTRNR2L2
PHF1
C6orf226
H2BC4
H2AC6
DHPS
CHMP2A
FLOT1
H2BC11
H2AC11
DVL2
MTRNR2L8
MAZ
ATAT1
SLC38A2
C18orf32
CCDC200
H4-16
SYCE2
DALRD3
H4C12
EDC4
SNX16
B3GALT4
H4C3
MSH4
H3C15
H3C14
H2AC19
H2AC18
JMJD7-PLA2G4B
JMJD7
CD68
NAT10
ZBTB45
ARFGAP2
H1-4
H2BC5
KRBA2
WDR74
IKBKG
G6PD
VPS28
H4C11
PDE4A
NDUFB10
SUMF2
SYNRG
NRAS
DNAJB14
H4C2
CDK11B
CDK11A
HSD17B8
C19orf53
NAT14
H2BC12
H2AC12
RAD23A
ABTB1
H2BC21
H2AC20
COX18
PDCD2L
AKAP8
CCDC24
CUL7
H3C7
SIX5
SLC35E3
RGL2
ZFX
TAPBP
PRKAG1
IDI1
PSMG1
POLG2
CLN8
DNAJC9
POMZP3
WDR6
GRAMD2A
RRP36
WBP1
STUB1
SCRIB
H2BC17
H2AC17
FAM131A
ZNF446
MRPL28
H1-2
H2BC8
H2AC8
GANAB
ZNF34
ZBTB12
DAPK3
H2AC21
VTI1B
PRRT2
CXorf38
TMEM230
GGA2
TRIM37
DHRS11
SLC50A1
ADAMTS10
SNAPC5
SECISBP2
RIT1
CCDC107
WDR97
MYG1
SH3BGRL3
FAM228B
SF3B6
FLOT2
RPS15A
CDK16
NADSYN1
GPAA1
THOC6
HCFC1R1
CENPA
RCE1
C6orf47
KIF2C
H3C2
PRKRIP1
H2AC4
ZNF580
ZNF653
MDP1
TOM1
ORAI3
MRPL53
PHLDA1
PIP5KL1
MAML1
SCAMP3
COX20
CCDC34
ATP5F1E
MAPKBP1
ABCB6
C17orf49
DDAH2
RABGEF1
H4C5
H3C4
KMT5B
TEDC2
NOLC1
HAX1
NPM3
LRRC24
H2BC13
H2AC13
H3C10
EPN1
GPN2
UBTF
CEMP1
CDH24
SP3
TBK1
VEZF1
SENP3
SURF6
DYRK1B
ZNF584
H2BC18
ABHD10
ICA1L
GATD3B
GATD3A
ANTKMT
VPS4A
AMDHD2
MTA2
PRMT3
ZNHIT2
MAD1L1
HMCES
ELK1
GMPPB
VWA7
MRPL40
HIRA
CAMK2N2
SNAP47
TSPAN31
TUSC2
ISY1-RAB43
ISY1
ROPN1L
FUT11
INPP5K
GET4
NXF1
SLC12A6
CELSR3
MROH6
INPP5E
TAOK2
PIM2
MYOZ3
NDST2
H2BC7
H2AC7
CAPNS1
ARL6IP4
RBM4
MFSD3
FADS2
DNAJC4
NANOS1
CYRIB
H4C9
SELENOH
TUT1
H4C14
H4C15
TMEM132A
PYGO2
LOC101928120
CTNNAL1
H3C13
UPF3A
YY1
TMEM134
ZFP36L1
TBCD
NUDT17
SRA1
SMTN
H4C1
H3C1
MVB12A
POMT1
STAG1
ANAPC4
FAM156B
FAM156A
SPOUT1
PWP2
LOC102724159
MAPK8IP3
GTF2A2
MAN2C1
C19orf71
IAH1
DPH7
H4C8
TFPT
PRPF31
JMJD8
LMNB1
URGCP
URGCP-MRPS24
CLIC3
PPP1R15B
DMPK
PSMB10
CSNK1G1
XRN1
RILP
MMP24OS
MMP24-AS1-EDEM2
SCFD1
SNX14
DCAKD
HMGN2
TIGD3
RSRC1
TCIRG1
ZNF513
ADAT1
EPN2
TAF10
MYL6
GCN1
MCCD1
TNS2
PRAF2
CRELD1
SUOX
HDAC10
ALOXE3
E2F3
CISD3
FAM83E
NAA80
HYAL3
DONSON
MOV10
PCBP4
THOC5
SEC14L1
PNMA1
DECR2
POLB
TLCD1
GSTO2
C5orf15
STYX
TXN2
TTLL3
GPR137
PTCH1
CRTC2
TULP3
DPM2
C5orf24
CCDC85B
GNE
LRP2BP
ANKRD37
ROMO1
PYGM
FBXW4
C11orf91
ADK
CCDC138
NAPRT
TTYH2
AK1
PITX3
SRSF11
VARS2
MLXIP
ANP32B
TEX52
SRRT
ZNF581
CRK
MIF4GD
RHOF
PIP4K2B
CD320
POLD1
APTX
ABCA7
SELENOO
TMEM179B
TLL2
LLGL2
C16orf46
MRI1
ABCF3
NUMBL
FAM174C
TIMM13
PABPN1
FBXO4
PIDD1
SSH3
MCOLN1
CDC6
ZACN
NME3
IMPDH2
MLX
POM121C
SFXN4
DDX56
TAF6
CNPY4
ZNF35
SLC25A42
NDUFS3
KBTBD4
SIRT7
KLHL11
CELF1
WDR90
H2BC15
H2AC15
MATR3
POP5
TUBD1
RPS6KB1
BUD13
TTC33
C7orf26
MAP3K12
MRM1
IFRD2
DNAJB4
RAB1B
JADE2
LARP1
CEP192
ATP6V0B
KPNB1
SCML1
NECAB3
FNBP1
CSKMT
C11orf98
ZNF865
TSFM
SLC25A10
EXOSC6
EHBP1L1
RNF225
TLCD2
NOP2
APOE
ULK3
TUBGCP6
RNF44
USP21
CASP6
NOL7
CHEK1
MTFR2
BAG2
MRNIP
GRWD1
IRF2BP2
FUT8
RRM1
EIF4A1
MIOX
ACOX3
SLC25A6
MST1
PLPP5
ARHGEF12
KCNK7
CCAR2
WDR83
MAN2B1
WDR45
PPFIA4
ZNF251
LZTS2
TTC16
PTRH1
FDX2
DPP3
SCO2
ARF3
DLG4
ACADVL
KAT5
ADHFE1
ACTN4
C8orf76
ST6GALNAC6
CRACR2B
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
BAZ2A
MED26
KDM4B
GPX1
E4F1
PPP1R35
TENT4A
PIK3R2
HAS3
WDR27
C6orf120
TMF1
ELMO3
CCDC97
WDR24
FBXO31
MAP1LC3B
ST3GAL3
MADD
ANKRD39
SEC31A
FAM219B
SEC14L2
ZNF517
SOD2
JPT2
TOR3A
ACAT2
UNC13D
LRCH3
GPS2
CASP2
AP2M1
AGO3
CCDC130
SLC25A17
CYC1
AMZ2
MTRF1L
PRKACA
CACNB1
ANKRD54
CEND1
TOB2
SPSB2
PTP4A1
RHBDL1
BRICD5
PDF
CSRNP2
ANKRD12
HAGHL
NDUFB2
CCDC78
SRSF4
CS
OSTC
PHTF1
L3MBTL1
DBP
TCTEX1D2
C12orf57
LBR
TSSC4
RASD1
HSF4
CACNB3
ZBED8
SWSAP1
EDEM1
SPAG7
CCNB2
GCAT
MAP4K2
SRCAP
LOC730183
PPOX
SPATC1L
THAP3
NR3C1
PELO
ITGA1
PHIP
GABARAP
ZBTB38
AGBL2
MRPS28
SLC35A2
TEX22
MXD1
NOXO1
VPS13C
MPHOSPH8
TFAM
MKNK1
COQ7
IFITM5
H3C12
UNC45A
DNASE1L2
RBMX
H2BC10
TMEM101
DCK
COMMD5
MRPL12
ZNF720
NAAA
LRP6
PGAM2
ZNF335
MAPKAPK5
TSN
RABL2B
RABL2A
SRD5A1
NSUN2
POLR3F
DZANK1
CACTIN
NVL
DYNC1LI2
NUP85
ICE1
VDAC2
IPO13
RWDD1
NME6
OAZ3
REXO1
MRPS7
GGA3
C19orf48
PSMD12
LYRM4
FARS2
SLC35B1
NCLN
SUCLG1
ZNF576
IRGQ
SUDS3
HSPA9
CAPRIN1
EFTUD2
CCDC103
UBE2I
RBBP5
PSMG2
GOSR2
CEP76
UPF2
POLR2E
EXOSC5
BCKDHA
DCTN1
VARS1
BLCAP
MRPL11
MRPS5
NUP205
HADHB
HADHA
STAM2
CDC73
ACTR10
COX7A2L
PSMD1
POLR2J3
TSNAX
PAK1IP1
C6orf52
SEC61B
COMMD1
CCT4
STAM
SART3
ISCU
SKP1
PI4KB
RABGGTB
SUPV3L1
USP1
PDAP1
BUD31
PES1
NDUFA4
PCBP1
ZRANB2
FARSB
ATP5MG
KMT2A
RPL21
PTGES2
TAF9
RAD17
AK6
TM9SF1
SELENOF
HS2ST1
EIF4ENIF1
ZNF276
EIF2S3
BRWD1
PNO1
PDHX
APIP
DDX39B
VPS9D1
MRPL24
AXDND1
GADD45GIP1
PCBD2
RPS27A
CLHC1
ANAPC7
GOLGA5
BAG6
APOM
RCOR3
TBCK
AIMP1
RXYLT1
TMED1
MRPL38
MRTO4
EMC1
SMC2
ECI1
YJU2
RPS23
ATP6AP1L
H3-3A
TTC8
PIN4
RHOT2
LAMP1
GLRX2
DPH6
NDUFA10
RPL35A
IQCG
BICRA
GTF3C4
DDX31
FAM104A
C17orf80
RABGAP1
RBKS
BABAM2
DENR
KIF27
BCAP29
TSC1
GFI1B
POLR2C
CNPY2
TRIM41
MEMO1
RPL7
RDH10
CALM2
ENAH
GAGE2A
DENND4B
IGF1R
CDK12
AP3M1
ADNP
RPN1
PACS1
ATXN2
TMPPE
GLB1
PROSER1
NHLRC3
LRRC37A3
SFT2D3
RPS12
GTF2IRD2B
GTF2IRD2
PATZ1
ROGDI
NUDT4B
NUDT4
SAMD1
H2BU1
ANKLE2
GINS2
OTUD7B
PAF1
MED29
TBC1D13
PNRC1
ATXN7L2
DPY19L4
SF3B3
COG4
TARS3
EIF2D
HSPA1B
UFM1
TRIM45
NAXE
MTMR10
DRAP1
C11orf68
STMP1
MORC3
ZNF341
ZNF398
CMTR1
RBM39
DNAJC21
XPNPEP3
ST13
NPRL3
SETD5
NUDT16L1
RICTOR
H2AW
C8orf37
POLDIP3
CUL9
LONP1
CATSPERD
ZBTB2
C8orf82
C7orf25
TP53BP2
CTNNB1
MT2A
EGLN1
DGKZ
HYI
METTL8
DCAF17
C17orf75
TRIM3
CLK3
HNRNPF
MEPCE
OVCA2
PAXBP1
DERA
RASA4B
YAP1
RUVBL1
PURA
MORF4L1
TLE3
ADARB1
TFAP4
PPP3CB
TXLNA
RNF166
CTU2
ALKBH5
RRM2
ASXL1
GDI1
HNRNPU
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
NFAT5
FIGN
STRIP1
NDUFS7
PHF10
LUC7L2
ZNF76
PRRC2B
ACVR2B
RFX1
KLF12
UFSP1
CHAF1B
KIAA2026
TRAP1
PMF1-BGLAP
PMF1
COMT
CACFD1
RUFY2
DIDO1
FAM199X
DESI2
PCDH9
PRKDC
MCM4
B4GALT7
FBXL3
ZMIZ2
QSER1
RAB4A
KMT2D
ATAD2
RAB23
KLC2
MTF2
PKM
ZNF862
ZNF48
COA6
SMG5
FAM118A
GBA
PPP1R37
NOXA1
EEFSEC
SQSTM1
PCBP2
SMN2
SMN1
TMEM267
ZNF383
N4BP2
PRDX1
CYB561D1
RABIF
PRSS27
PDE4DIP
IBA57
TSPAN10
NPLOC4
LRRC73
TRIM65
KAT8
SLC39A13
ATXN2L
RIPK1
RPS29
LRR1
C1QBP
SMYD2
POGZ
MTHFS
JAK1
C1orf56
RRAGC
GORAB
PPP1CC
CALM1
CDKN2A
SIPA1
NBPF1
AKT3
BNIP3
ZNF451
FANCC
RCC2
AQP11
PANK1
UNC119
KAT6A
DNAJB12
ZCWPW1
NFATC3
HIPK1
C16orf71
ANKS3
SEC61A2
ATAD3A
WBP1L
ZFAND6
MFSD14A
LMBR1
KANSL1
HOXA5
ERCC6L2
DIAPH1
TNKS1BP1
COX19
PATJ
ACADM
NEIL1
RPL37
MTIF3
IL10RB
GFER
PAK2
TAF2
NCOA2
SSX2IP
MYNN
MKRN2
ATPAF1
DNLZ
FASTK
FARP2
FAM117B
ETV6
TMEM150A
SCAI
NBPF15
CPSF1
ARSG
KDM3B
SGF29
SF1
UBA2
CHD8
ACBD6
HMGN1
NCBP3
CHD1L
TPTEP2-CSNK1E
LATS1
SUPT4H1
WASHC2C
SEMA4B
DSTYK
CCDC88A
B3GAT3
SLC6A9
PRR7
TRAF4
NOTCH2
NUB1
ECHS1
ERLIN1
SORT1
ARHGEF1
ZFP64
CNP
GOLM2
AKAP1
ABL2
SPCS1
GLT8D1
POLR3D
GOLGA1
DDX59
PDCD6
NCOA7
JMJD4