ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8018230 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◣ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX10448664: HeLa

◢ SRX10448665: HeLa

◢ SRX10448666: HeLa

◢ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

H3C15
H3C14
POLR2J3
DNAJB14
FAM174C
H4C14
KMT2A
ENAH
H4C15
MORC3
B3GALT4
TLCD1
H2BC21
H2AC20
H2AC21
H3-3A
IDI1
RRP36
ZC3H10
H1-4
H2BC5
SCRIB
AMDHD2
MORF4L1
VEZF1
RCOR3
ZNF34
H2BC11
H2AC11
EGLN1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
H3C2
KLF12
COX20
C6orf226
SECISBP2
KIF27
CTNNB1
TARS3
KIAA2026
PPP3CB
HNRNPU
JMJD8
PIP4K2B
VPS28
PRRC2B
H1-2
DESI2
ABL2
POGZ
PYCR2
TRAPPC8
MMP24OS
MMP24-AS1-EDEM2
AKT3
TMEM230
HMGN1
H2AC19
H2AC18
C17orf49
NECAB3
HMGN2
FBXL3
PRSS27
SNAPC5
NUDT4B
NUDT4
LMBR1
EPN1
H4C1
H3C1
ZBTB2
SYNRG
H4C11
TBC1D13
SRSF11
MEMO1
ZNF276
VPS9D1
RAB4A
ZNF398
SETD5
FAM118A
IBA57
GATAD2B
POLG2
H3C13
H2BC18
HIPK1
TNRC18
ADARB1
PARP1
DEDD
AGK
ZNF580
TPTEP2-CSNK1E
NCOA7
ZNF513
GTPBP3
ANO8
H4C3
PPP1CC
EYA4
EDC4
NOXA1
KMT2C
UBP1
CLK3
CUL1
PCDH9
NFKBIA
QSOX1
PANK3
ATXN7L2
MAP3K21
EZH2
BRWD1
AKAP8
EIF2D
ZFAND6
ARHGAP35
AKT2
SUPT4H1
RABGAP1
HNRNPF
CDC42BPA
C15orf39
YBX1
ZBTB20
DNAJC9
RRNAD1
ISG20L2
CTNNA1
DRAP1
C11orf68
PDE4DIP
ACBD3
RUFY2
SP3
TFAP4
PDCD2
HSPG2
TAF10
BRAF
SP1
SVBP
ERMAP
FNBP1
MAN2C1
HYI
SPIN1
SSX2IP
MAP3K2
HECTD1
RAVER2
DYRK1B
H2BC12
H2AC12
CMTM7
SLC25A10
NUB1
B3GALNT2
STAU1
ULK3
GDPGP1
CIB1
C18orf32
FPGS
MSL3
DVL2
DPY19L4
OTUD7B
VANGL2
PCBD2
SMIM19
SLC20A2
CCSAP
NAXE
NUCKS1
ZNF768
USP21
DPH7
RRM2
MKRN1
RNF11
JAK1
BMI1
ARHGEF11
PRRT2
FAM199X
STMP1
SKIDA1
CCDC88A
GPR180
ASH1L
ITGB3BP
EFCAB7
ESR2
NCAM2
DSG2
FBXO11
CUL7
DONSON
DDX59
NR1D2
NKIRAS1
UBE2D2
TRABD
SCAMP3
ZNF48
OPN3
CHML
CIRBP
HIVEP1
EPHX1
CIZ1
AGO3
ARID3B
KANSL1L
RASA4B
EFCAB2
UBE2J2
ADSS2
ZMYM4
NOTCH1
LUC7L2
KANSL1
NUTF2
CENPT
SPOPL
SRCAP
LOC730183
SMYD2
PPP1CA
MCL1
CHMP2A
NR2C2
PHACTR2
SATB1
ATP11B
NFAT5
SMARCD2
UBA3
GALNT11
ZBTB18
URB2
TAF5L
REPIN1
GPAA1
CDC42EP4
CBX1
NCOA2
WIZ
PABPN1
ADNP
ZNF341
TMEM150A
KMT5B
TP53BP2
CHD1L
PRKAB2
PEX7
PRKAG2
ITGB1
SUMF2
H3C4
H2BC7
H2AC7
SLC22A23
ANKRD50
KDM3B
REV3L
STC2
H3C10
ANKRD54
SLAIN1
BACH1
PRPF40B
NT5C2
SPRY2
SEC31A
RAD54L2
USF3
SCRN1
WDR48
SCN11A
RWDD3
LRRC37A3
CHAF1B
MKRN2
MSI2
ZNF70
ATXN2
UNC5A
USP12
TATDN2
C7orf26
LPGAT1
THAP12
GVQW3
ANKRD36C
PACS1
HOXA3
EPS15
CASC3
ATXN7
DISC1
TBXAS1
HIPK2
PHYKPL
TLK1
SYT14
SAMD1
MTF2
ZNF862
LRRFIP2
SOD2
ANP32B
PPP4R2
ZNF445
THRB
SLC35D1
DHX9
TACC1
NRAS
C21orf91
ZNF213
HSPE1-MOB4
HSPE1
HSPD1
DENND4B
ZBTB37
UBA2
TIGD1
EIF4E2
GAREM1
JAGN1
MRPL40
HIRA
AP1S2
TMEM68
TGS1
UFSP1
ABCB10
GPC4
DBN1
INPP5E
GLRX2
TXLNA
FAM53C
CDC25C
DIDO1
GCLC
MAZ
ATXN2L
LPAR3
RBX1
H2BC15
H2AC15
BMP2K
ANKRD28
TRAM2
RILPL1
H2BC13
H2AC13
MIER1
RBBP8
STX18
PBX3
DSTYK
HPRT1
DENND2B
TRDMT1
C18orf21
FNDC3A
SDCCAG8
CEP170
PPFIA4
DNAJB12
EPM2A
B4GALT6
SLC27A4
TRIM24
DYNLL2
ACBD6
DEGS1
MPP5
SESN1
MIB1
PTMA
USP34
LAMC1
POMZP3
STAG1
NBPF15
PRR7
ZNF652
HMGB1
KEAP1
B4GALT1
PHIP
NBPF1
PIAS1
FHOD3
C15orf61
HECTD4
PIK3R1
SNAP47
KANSL3
TGIF2-RAB5IF
TGIF2
MPC2
DCAF6
CMTM3
TM2D3
ZMYND11
CDC42
STARD4
GREB1L
ZNF76
SETD6
RNF220
SRRM3
CYREN
PHC1
H2AZ2
TLN1
CREB3
BCAP29
PURA
UBE2V1
MAX
GCN1
N4BP3
PITRM1
PFN2
MID2
KCNB2
PRKRA
PJVK
ZBTB17
FAH
RAD23A
PNRC1
LATS1
UBE2Z
EXOC2
ARHGAP10
IGF1R
GALNT2
UNK
RFK
SQSTM1
NOTCH2
SGPL1
MGAT4B
PKP4
CCDC148
ERICH2
TCAF1
ARFGAP2
ARHGEF12
H4C4
MYBL1
RC3H2
PXK
PSEN2
TPGS2
ZBTB44
KRBA2
H4C5
SRSF4
CPSF1
ZNF740
CSAD
ZNF865
RFX1
WDR37
BTBD1
CD276
IQSEC1
RCN2
ERMARD
PSTK
DYNC1LI2
PCBP2
ZBTB38
SMIM13
CAPN7
PAFAH1B2
WDR17
RBM15
HOXB9
DDHD1
ZFYVE9
BPTF
ARL8B
RNF138
WRNIP1
STON2
RALB
PGBD5
SERTAD2
ADPGK
DNAJC6
DTD1
E2F3
COG2
SBF2
ATXN7L3
TAB2
ATF1
SPACA6
LMO7
IMPACT
ZNF697
RYR2
TSC1
GFI1B
ANKRD18B
PEX3
ADAT2
TARBP1
CREBRF
SRD5A3
DSP
FBXO30
TBC1D5
NOVA1
SOWAHC
SEPTIN10
TRIM3
SPTAN1
BHLHE40
PTPN14
RALGAPA1
C17orf75
DNAH14
STUM
JUP
SYNCRIP
FNBP1L
CRIM1
THEM4
RABGGTA
PTPN4
RASA4
EBAG9
KMT2E
HLCS
GPRIN1
HOXD8
BPHL
TMEM132A
KAT6A
RNF38
GPBP1
STRN
ZMAT1
PTPRU
PHF10
PRRC2A
LIX1L
CNOT8
SEC22C
NKTR
IQGAP1
ATP1B1
PAQR3
TLE1
DCAF1
FAM131A
DECR2
FAM207A
CLN5
SRR
SMG6
SDC4
CRTAP
DYNC1LI1
FBXL4
TMEM179B
POLG
EPB41
RANBP17
SRF
CNIH1
UBE2N
CCDC92B
ROM1
EML3
TRIM44
FAM3C
PARP16
CDC73
ARSG
ASPSCR1
ERO1A
SLC16A6
RXYLT1
B4GALT7
RNF139
LSS
NEK7
YPEL1
LHX4
CDK13
GET4
TSPAN10
NPLOC4
PATJ
RNF135
RBM26
PRKCQ
CEP68
KCNH1
ZKSCAN2
NEMP2
SMARCB1
OTX1
TTC21B
INSIG1
SLC17A5
DCBLD1
SRXN1
FN1
USP33
SLC5A6
ATRAID
RUVBL1
EEFSEC
GAA
C1orf53
MSRB2
HDLBP
TAOK1
VDAC3
CSRNP2
GOLGA1
PTEN
KLLN
SLC44A1
DGKH
ATF3
ZNF644
BRPF1
UBE2L3
RIMBP3C
RIMBP3B
MRPL38
VPS4A
KRAS
ACTN2
SLC44A3
MAP2K7
CEP85L
FZD1
ARSB
RPL6
PTPN11
DNAJC25-GNG10
DNAJC25
FBXW2
CDC5L
ANKRD36
PAFAH1B1
KLHL25
PLEKHF2
SENP8
MYO9A
SUSD5
H2BC4
H2AC6
WDR27
C6orf120
COA6
MTHFS
XYLB
HES1
PHGDH
UIMC1
RMC1
LYST
OAT
RASAL2
RAPH1
LRRC8A
KYAT1
MECP2
OSBPL6
RBSN
MAPK8IP3
PNMA1
SCO2
NCBP3
DNAJB2
AKAP13
LARP4B
BRPF3
CHRNA5
C3orf80
FBXW5
THAP9
TTC23
LRRC28
C8G
CPOX
CLASP2
RAB43
KAT8
ING5
COX5A
TBC1D14
SPTSSA
AHCYL1
EIF4G1
COL6A1
LBR
SLC6A9
GTF2H2
NT5DC1
ZNF609
ZC3H4
TMEM250
TTLL11
CXADR
LMNB1
NOL7
EDEM1
ACADM
LRP11
SURF6
AK1
ZBTB10
COPS7B
DOCK7
HOOK1
ATP2A2
SSBP2
ACVR1C
PGBD1
MAIP1
RCBTB1
PYGL
POGLUT3
RNF214
PCSK7
DTX2
ABI2
RGMA
RCOR2
IGSF3
MMAA
TMCC1
PYGO2
LOC101928120
COMT
PKM
SCAF8
MNX1
HNRNPA3
DUSP14
JARID2
CDC7
YPEL3
GNB2
H2BU1
TTYH2
H2AW
ASXL1
NPTN
ACTR1B
LYPLA1
SLC48A1
GPX1
OVCA2
FOXP1
METTL9
MLLT1
KIAA1522
TASOR2
STK40
ARRDC3
RCAN3
KIF13A
ROCK2
PSKH1
TVP23B
FGGY
SYNE2
GMNN
UAP1L1
H4C2
SIRT7
GFER
TIRAP
WDTC1
TTC7A
MCFD2
LNPEP
RHEB
DENND10
SYN3
GALNT1
RRP1B
HSF2BP
SIK2
PLEKHO2
PKN3
RPL7
RDH10
TIGD3
GDI1
TRAF4
LAMTOR3
NOM1
IKZF4
DCUN1D4
C16orf87
HDAC1
INTS12
GSTCD
CBX4
FASN
EXOSC6
MFSD3
SEMA4B
JMJD4
ZNF148
TLCD4-RWDD3
TLCD4
RNF19A
RASL10B
MAPKAP1
CKAP2
SEMA7A
CNN3
E2F8
ASAP3
UNC119
MCOLN2
C12orf75
SNX17
EIF2B4
EPB41L2
PDCD5
CHID1
AMOTL1
ABTB1
GGA2
EIF4ENIF1
LRP6
SLC25A42
THAP3
SPATA1
GNG5
TERF2
DIP2B
NECTIN3
LEPR
LEPROT
ERBIN
FOXG1
SCAI
PHF19
MRPL48
HNRNPL
MRPS24
NIT2
INO80
GZF1
GTF2IRD2B
GTF2IRD2
SCAP
ZER1
FRA10AC1
IDH2
TKT
ERO1B
BRSK1
PPP4R3A
HHIPL1
CCDC85C
IKBKB
BRI3
ZFX
ST3GAL3
RAB23
DCAF10
MRTFB
UBXN2A
KIAA0232
TTC21A
GORASP1
SRRM2
PRRG4
HOXB4
AGBL3
RCE1
ZMIZ2
SLC24A1
MAN1A2
ZNF787
TGFBR2
ZBTB21
DNAI4
LRP12
UBIAD1
SNUPN
ODC1
ATAT1
DHRS11
MYL6
SLC39A13
CALM1
ATPAF1
BOLA3
MCUR1
MTCH1
ADAM17
SYDE2
MFSD4B
TOP2B
SLC35B2
STK3
BLMH
RNF130
CYP2U1
MESD
HPCAL1
SSRP1
DHRS13
SIMC1
PDP1
IL13RA1
EIF2AK2
HTATSF1
RUFY1
TMEM65
CERS2
UBAP2L
C1orf43
TLCD5
CASP6
GBA
TCF3
PSMG4
DTWD2
HFM1
KCNJ4
ARFGEF2
CAPZA2
FMN2
CSNK1G3
SLC39A6
ELP2
FOXJ3
TPK1
INKA2
DDX20
PCNX2
RAP2C
PRELID3A
ARHGAP29
SURF4
MYBL2
LAMTOR1
UBXN6
SNX7
USP24
KATNBL1
CCDC3
ZCWPW2
AZI2
CAPN1
AUTS2
TOB1
TMTC4
SLC12A9
EPHB4
KLF4
RAB40C
LIN9
MCMBP
UBQLN4
LAMTOR2
GINM1
SH3D19
TNIP1
ZSCAN30
SLC16A10
KIF3B
SMAD4
HOXD13
CELSR3
DCP1A
RPAP3
UNC119B