ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10448667 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX10448664: HeLa

◢ SRX10448665: HeLa

◢ SRX10448666: HeLa

◣ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

PGK1
CCDC200
C6orf226
SYCE2
DHPS
DVL2
ATAT1
ZC3H10
KRBA2
C19orf53
PHF1
EPN2
H4C3
H2BC4
H2AC6
EDC4
C18orf32
DNAJC9
NRAS
JMJD7-PLA2G4B
JMJD7
DDAH2
H4C12
CHMP2A
SYNRG
VPS28
ZFP36L1
H2BC11
H2AC11
H4C11
B3GALT4
SCRIB
SUMF2
NADSYN1
SLC35E3
H4-16
GPN2
CUL7
FAM131A
DALRD3
COX20
MAZ
PDE4A
MRPL53
NAT10
ARFGAP2
CXorf38
H3C7
FAM228B
SF3B6
CD68
SNAPC5
CCDC85B
VTI1B
VEZF1
SCAMP3
AMDHD2
SLC38A2
IKBKG
G6PD
GGA2
TUSC2
NAT14
H4C2
RIT1
ABTB1
PRKRIP1
HSD17B8
INPP5E
ZNF653
STAG1
GTF2A2
H2BC12
H2AC12
POLG2
MYG1
H1-4
H2BC5
CAPNS1
MSH4
H1-2
PRKAG1
CCDC107
E2F3
DNAJB14
AKAP8
NDUFB10
ZNF34
MT2A
THOC6
HCFC1R1
RAD23A
C6orf47
H2BC21
H2AC20
CDK11B
CDK11A
KIF2C
MRPL40
HIRA
MTA2
TRIM41
SIRT7
ZNF446
H2BC8
H2AC8
SECISBP2
ZNF580
RRP36
EPN1
PRAF2
SH3BGRL3
PRRT2
CYRIB
FLOT2
H3C13
H2BC18
VARS2
CCDC24
FUT11
H3C15
H3C14
H2AC19
H2AC18
HMCES
POLD1
CDK16
TRIM37
MDP1
WBP1
POMZP3
MOV10
SCFD1
FADS2
CDH24
CCDC34
SPOUT1
FLOT1
TBK1
PSMG1
H2BC15
H2AC15
CD320
MST1
PATZ1
CSKMT
C11orf98
ANKH
TRMT112
DONSON
TLCD2
TCTEX1D2
ELK1
RPS15A
KMT5B
SNAP47
GMPPB
H3C2
H2AC4
PDCD2L
VWA7
NXF1
H4C5
TEDC2
IRF2BP2
TLL2
SORBS2
MYNN
EHBP1L1
GANAB
WDR6
NOLC1
PIM2
STYX
MATR3
PHLDA1
SNX14
H3C4
H2BC7
H2AC7
GINS2
MAD1L1
HMGN2
UBTF
LMNB1
H2AC21
KLHL11
TOM1
GPAA1
C17orf49
PYGO2
LOC101928120
NPM3
ZBTB45
GSTO2
H2BC17
H2AC17
ZFX
ING1
H3C12
NDST2
METTL8
DCAF17
GATD3B
GATD3A
IGF1R
CAMK2N2
SFT2D3
SRSF11
C5orf24
JADE2
HAX1
H4C1
H3C1
INPP5K
RGL2
TOB2
LLGL2
C8orf37
HMGA1
LARP1
MAPK8IP3
WDR90
PHF8
DNAJB4
PNRC1
WBP1L
DNAJC4
POLR3D
COX18
RBM4
STUB1
ICA1L
DUSP5
PWP2
LOC102724159
MTIF3
SIX5
TRIM45
ANAPC4
DPH7
DHRS11
PRKDC
MCM4
BAZ2A
SP3
TTLL3
GINS3
TRIM25
ARL6IP4
DAPK3
HDAC10
MROH6
GET4
MTMR10
ABCF3
FAM83E
SCO2
RILP
H4C9
GRAMD2A
ACVR2B
TIMM13
XRN1
TUBGCP6
FDX2
FIGN
MAML1
SELENOH
ABCB6
TLE3
DYRK1B
TIMMDC1
ETV6
IFRD2
BAG2
TMEM132A
PPP1R37
CISD3
SRRT
MVB12A
H2BC13
H2AC13
H3C10
RAB23
ADK
PCBP1
PIP5KL1
WDR74
WDR24
HSF4
ACTN4
SNX16
ARF3
ADGRF3
MAPKBP1
TMEM179B
NAPRT
KLF6
LAMP1
ROPN1L
IMPDH2
ATP5F1E
MYL6
NPRL3
PIDD1
TBC1D22A
C19orf71
JMJD8
CDC6
EFCAB13
C16orf46
LRP2BP
ANKRD37
PMM1
WDR97
CCDC138
YAP1
QSER1
SLC25A10
H4C8
ATP6V0B
ORAI3
PHF10
MYC
PNMA1
ANTKMT
APTX
TMEM230
LRRC24
ANKRD12
SGF29
NANOS1
CRTC2
MRPL28
TTC33
TNS2
SERINC4
HYPK
NARF
H3-2
PXDN
RHOT2
PCBP4
CENPA
CALM2
PRMT3
RANGRF
THOC5
CSNK1G1
GPR137
BAD
H4C14
RABGEF1
LONP1
CATSPERD
TAF2
ZNF782
POM121C
ZNF513
ZNF35
SLC50A1
COA6
STXBP2
RAB1B
SLC30A7
EXTL2
DPP3
GCN1
H4C15
EXOSC6
RSRC1
SEMA4C
MCCD1
ZNF451
LRP8
DCAKD
PHF14
NME3
NME6
SURF6
TFPT
PRPF31
MMP24OS
MMP24-AS1-EDEM2
ZNF276
VPS9D1
YWHAH
C1orf56
LRPPRC
CRK
CS
MICAL3
TAOK2
MTFR2
TAF4
PCBD2
TAF10
SRSF4
CLN8
PANK1
CEP192
N4BP2
FANCC
COX8A
FBXO31
MAP1LC3B
FNBP1
RCC2
ADAT1
ROMO1
CELF1
RRAGC
AQP11
POLR2H
SPAG9
MPHOSPH8
SRCAP
LOC730183
TTYH2
NUDT17
PAIP2
IL10RB
ZBTB12
HDAC7
HNRNPH3
FOSB
FOS
PYROXD1
TRIM3
ISY1-RAB43
ISY1
ZNF48
POP5
SIPA1
CHEK1
MAN2C1
MNT
SMTN
JOSD2
ZIC2
TFAM
VAV2
MLXIP
TUT1
SBDS
EIF4A1
C1QBP
FAM117B
PCMTD2
TLCD1
MLX
MRM1
CLIC3
ZNF581
URGCP
URGCP-MRPS24
URB1
SEC14L1
OVCA2
SLC12A6
KLC2
UNC13D
ADHFE1
MRPL12
SLC35A2
SETD5
ATXN2L
HYKK
GLE1
CSGALNACT1
NDUFS3
KBTBD4
TAPBP
PDF
CFD
GABARAPL1
CDKN2A
PNPLA6
DECR2
MAP3K1
DPY30
CACNB3
TMEM243
MADD
FAM156B
SENP3
USP21
C12orf57
PTPN6
NCOA2
AJM1
C7orf26
ARID1A
SEC14L2
RPL37
BCAR3
GABARAP
RPRML
TBXA2R
CELSR3
BCL6
YY1
CCAR2
SPTAN1
ZSCAN16
RARS1
BRD3
DNAJC21
MIF4GD
FNTA
MRAS
TMEM151A
CTNNAL1
CSRNP2
CCDC97
LRRC73
SLC6A9
STXBP3
KMT2A
RASD1
TSFM
SPRY1
ACOX3
INTS1
PTP4A1
VGF
TP53BP2
TUBD1
RPS6KB1
SLC5A3
MRPS6
ETV4
BRWD1
SELENOO
CCDC130
PRKACB
PDCD4
STK19
DXO
CYB561D1
PRR12
IVD
LBR
CACFD1
MRI1
G3BP2
DERA
NAA80
HYAL3
C7orf25
SMIM27
TOPORS
KMT2E
CRELD1
SF1
PSEN1
ULK3
ECI1
ZBTB2
PKM
NAA35
MTRNR2L2
SLU7
MRPL24
ADAMTS10
ZBTB10
ZBTB22
TMF1
LPCAT3
TCIRG1
SWSAP1
DHX58
TXN2
SAMD1
TULP3
FOXO3
ZDHHC12
NOP2
ALOXE3
SSH2
GPS2
PLPP5
HOXA5
DMPK
COQ3
SPRYD3
POLR2G
WDR27
C6orf120
POLB
H3C8
MPC1
IAH1
SGK1
NSD2
PLEKHN1
SRA1
ABCA7
NEIL1
PAK2
FBXW5
ZNF25
PACS1
SLC25A6
PXDC1
PGGT1B
COQ7
AGBL2
KLHDC9
CLASRP
NFE2L2
CHAC2
USF2
POLR2C
RNF225
PHF19
AGAP11
CTHRC1
GTF3C4
DDX31
RABGAP1
TMEM223
PITX3
GATAD1
PIP4K2B
NOXO1
ARL6IP6
TFAP4
ZNF584
KAT8
MRGBP
RCE1
CUL9
SOD2
ZFP64
ACAT2
ARMC7
DAB2
DDX49
COPE
SMN2
SMN1
ZNF217
TMEM14B
PIK3CA
VMAC
NDUFA11
SEMA4B
FAM72A
ARHGEF17
PHF21A
TMEM134
C11orf91
FAM53B
SPPL2B
LSM7
ELOVL6
WDR75
ROGDI
TMEM101
NFKBIZ
NPAS2
ADNP
C16orf71
ANKS3
PHF23
LMTK3
SLC25A17
DYRK1A
JPT2
PMF1-BGLAP
PMF1
KAT5
CHCHD2
SSH3
FASTK
NDUFA2
IK
GSTT1
ATAD2
POMT2
GSTZ1
SPATC1L
NFATC3
SUOX
CUX1
TXNDC15
EXT1
NUDT16L1
C5orf15
STMP1
LRCH3
FBXL14
ARRB1
SLC43A2
SLC26A6
PTK2
LIN37
RIPK1
DNM2
VPS4A
MRPL34
FAM189B
ABHD8
IDI1
RICTOR
RASA4B
BSCL2
IL17RA
NAAA
EIF5A2
TSPAN31
TAS1R3
BRICD5
RACK1
MVP
ATAD3A
MED26
WDR62
THAP8
MSL1
MTX1
RASA4
THBS3
MAGOHB
SLITRK3
ZNF865
NOL7
MRPS28
PTCH1
C17orf58
UPF3A
MAP3K12
COMMD5
TARBP2
SFXN4
SMAGP
TEX52
MAP2K5
CASP6
IPO4
PRDX1
SEC16A
C9orf163
FOSL1
CEP70
C2
GOLPH3
SPRED1
PRPF40A
POLR2B
CYC1
SORT1
TGIF1
FABP3
TIGD3
HNRNPUL1
PABPN1
NFIB
RHOT1
RNF7
AGO2
FBXO22
BTG1
QKI
AK1
KPNB1
MLLT3
C8orf82
NUMBL
HAGHL
CCDC78
MFN1
ZFAND2B
PLEKHM1
DUT
NR3C1
NOP16
HEXIM2
CELF6
PSMB8
BSG
AGO3
SLC25A42
FBXO4
PHIP
PRELID3A
SUN1
ITGB1BP2
TFAP2A
MFSD3
ARPC3
RHOQ
ATP6V1E2
POLR2J3
POMT1
ARHGEF12
FBXL20
TSSC4
KCTD15
KDM4B
DCTN6
PRKACA
GPX8
FBXW4
DDX56
MAT2B
ZBTB25
ZBTB1
TXNDC5
MIS18A
BIRC2
TROAP
SEPSECS
PSMB3
PKNOX1
TMEM248
BEGAIN
RIOK2
PSMA6
GNE
OTUB1
TAF1D
C11orf54
PPFIA4
RAD23B
GRWD1
ACY1
DDX21
RAD9A
SPAG1
WNK1
PPARG
DPM2
ZNF75D
ZNF449
SF3B2
MTRNR2L8
ZNHIT2
UNC119
NR2C2AP
MAP3K8
CABIN1
C6orf62
TMEM116
SOGA1
ERP29
SEC31A
PPP1R15B
ARSB
ST6GALNAC6
LOC114841035
FKBP2
BCAP29
PERP
SLC16A3
SLC7A6
OTUD5
BST2
SMARCD1
LZTS3
FAM72D
IFITM5
KIFBP
CCDC169-SOHLH2
CCDC169
NDRG1
TRERF1
KIAA1958
C9orf147
PCGF1
ARPC1B
PCGF2
LAG3
ABHD15
RFX1
CNP
PTEN
KLLN
RBM4B
FBXL5
MROH1
EEF1AKMT1
KAT2A
DHRS4L1
TMEM115
KIF27
MEMO1
OSTC
INO80D
DBP
P4HA1
PURA
C8orf76
XXYLT1
PROCA1
NKIRAS2
GPX4
ALDH1B1
AKAP1
VPS26A
ZNF706
DLAT
L3MBTL1
POU2F1
SINHCAF
PRPSAP2
APOLD1
ALDOC
DENND4B
JAK1
ZNF696
ERCC5
PPIA
KPTN
KTI12
LSMEM1
COL4A6
PDLIM5
CRACR2B
LRRC46
WASHC2C
MTCH1
RRM1
INPPL1
RNF40
CCDC189
RBMX
FAM174C
SQSTM1
SPIRE2
FUT8
TCF25
ALG5
TPM2
ATG5
MTF1
DUSP22
HIPK3
ASAH1
C1QTNF6
H2BC10
MTMR11
FAM76B
CEP57
JPH1
AP2M1
SPTLC1
CDC42EP2
TDRD3
AMZ2
ZBED8
MACIR
CLIP1
PABPC1
EFNA1
ALKBH7
NSUN3
DHFR2
GRK6
KREMEN2
LUC7L2
CALM1
NUDT1
MRM2
MFSD1
KRI1
TTPAL
TTC30B
DYNLRB1
LGR4
NDUFV2
ZBTB6
UBA1
RHOF
PCIF1
RFC4
ZRSR2
RARRES2
KLHL35
CACTIN
ECHS1
WDR83
MAN2B1
REV1
CDC16
WASHC4
YPEL5
ZNF518A
RRM2
ERLIN1
CNOT8
RETREG2
CNPPD1
SPAG5
MXI1
PIK3R2
CCNA2
ZNF784