ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10448666 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX10448664: HeLa

◢ SRX10448665: HeLa

◣ SRX10448666: HeLa

◢ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

PGK1
CCDC200
H2BC4
H2AC6
MTRNR2L2
SYCE2
ZC3H10
DHPS
H2BC11
H2AC11
C6orf226
PHF1
H1-4
H2BC5
H4C12
EPN2
DVL2
SLC38A2
B3GALT4
DALRD3
MTRNR2L8
SNX16
FLOT1
H2BC12
H2AC12
CHMP2A
H4C3
C19orf53
CCDC85B
C18orf32
ZFP36L1
H3C15
H3C14
H2AC19
H2AC18
EDC4
H4-16
KRBA2
H4C2
E2F3
MSH4
SUMF2
H4C11
DNAJC9
SYNRG
NADSYN1
JMJD7-PLA2G4B
JMJD7
SCRIB
MAZ
ATAT1
NRAS
PRKRIP1
NAT14
H3C7
SNAPC5
VPS28
H1-2
MRPL53
H2BC21
H2AC20
PDE4A
VEZF1
COX20
SIRT7
POLG2
WDR74
CAPNS1
ZNF34
KMT5B
RRP36
NAT10
H2BC8
H2AC8
MYG1
DDAH2
IRF2BP2
ARFGAP2
ZNF580
CD68
HMCES
FAM131A
AMDHD2
STAG1
KIF2C
SNX14
UBTF
ZNF446
H2BC17
H2AC17
MRPL40
HIRA
H2AC21
FADS2
GPN2
SLC35E3
HMGN2
CSKMT
C11orf98
INPP5E
GGA2
ABTB1
PRKAG1
DNAJB14
CUL7
PSMG1
GTF2A2
CXorf38
RIT1
ZBTB45
C5orf24
H3C4
H2BC7
H2AC7
PHLDA1
TUSC2
IKBKG
G6PD
H3C2
H2AC4
RAD23A
FAM228B
SF3B6
WDR90
AKAP8
VTI1B
THOC6
HCFC1R1
PRAF2
PYGO2
LOC101928120
ZNF653
MST1
PCBP4
FLOT2
MOV10
HSD17B8
CCDC107
WBP1
POMZP3
VWA7
SECISBP2
PRRT2
TRIM41
PHF8
PNMA1
TOB2
CYRIB
WDR6
STUB1
PCBP1
C6orf47
METTL8
DCAF17
JADE2
PATZ1
H3C13
H2BC18
SCO2
SH3BGRL3
CDK11B
CDK11A
H4C5
H2BC15
H2AC15
ROPN1L
THOC5
DHRS11
ARL6IP4
NXF1
ACTN4
C17orf49
LRRC24
TCTEX1D2
CCDC24
PDCD2L
SCAMP3
SFT2D3
TEDC2
EPN1
FIGN
CCDC34
H4C1
H3C1
RGL2
TLE3
MDP1
ZNF35
SRSF11
DAPK3
GSTO2
NOLC1
ELK1
MAD1L1
FUT11
TRIM37
SRSF4
N4BP2
SP3
PNRC1
ING1
TFAM
MAML1
RCC2
LMNB1
FDX2
ANTKMT
COX18
IGF1R
QSER1
MTA2
SPOUT1
JMJD8
NANOS1
ZFX
CD320
MRPL28
LONP1
CATSPERD
PIM2
C16orf46
MTIF3
HMGA1
LRP8
DNAJB4
PNPLA6
RPS15A
KLHL11
H2BC13
H2AC13
H3C10
DPH7
H4C8
TRIM45
ISY1-RAB43
ISY1
ETV6
SNAP47
SLC25A10
LARP1
H4C9
BCL6
INPP5K
CDK16
GATD3B
GATD3A
RSRC1
FANCC
H4C14
H4C15
GPAA1
TMEM230
XRN1
MATR3
GINS2
SEMA4C
CENPA
FAM117B
DONSON
STYX
PWP2
LOC102724159
LAMP1
GRAMD2A
POLR3D
RANGRF
GMPPB
NDST2
CDH24
YY1
SF1
ADK
POLD1
SEC14L1
ZNF782
AJM1
WBP1L
TNS2
SLC50A1
SLC6A9
CDKN2A
GINS3
MYL6
SCFD1
TLCD2
PANK1
MAP3K1
ATXN2
PSEN1
VGF
ZBTB2
CEP192
TOM1
ABCB6
IFRD2
DYRK1B
MYNN
SMTN
IMPDH2
ACVR2B
MAPK8IP3
MAPKBP1
PAIP2
SPATC1L
BAG2
ARF3
MTMR10
C8orf37
TAS1R3
GANAB
TLL2
C1orf56
ZNF581
CRK
TAPBP
TIMM13
URGCP
URGCP-MRPS24
ORAI3
TBK1
VARS2
CCDC138
NUDT17
WDR97
DENND5B
SURF6
SAMD1
PXDC1
ZNF276
C19orf71
RAB23
NPM3
AGO3
SERINC4
HYPK
WDR24
FAM76B
CEP57
GCN1
HAX1
CYC1
C1QBP
HDAC10
CALM2
RAB1B
PKM
ACOX3
TRIM25
RHOT2
PRMT3
DMPK
LLGL2
ZBTB12
MLXIP
MRPL12
C2
POLB
PTP4A1
ZNF513
TTC33
PHF10
ICA1L
MVB12A
SETD5
SGF29
COX8A
TBXA2R
CELF1
TMEM179B
KIF27
PRKDC
MCM4
PLEKHN1
PIP5KL1
ROMO1
MYC
PXDN
CTNNAL1
CS
CRELD1
KLC2
SLC30A7
EXTL2
BAZ2A
MNT
TAF10
GPR137
VAV2
ATP5F1E
TMEM243
DPP3
H3C8
SELENOH
MLX
CLN8
HAGHL
C12orf57
CCDC78
ADHFE1
TGIF1
GTF2IRD2B
GTF2IRD2
OVCA2
PGGT1B
PIP4K2B
ADAT1
TXN2
FOXO3
HSF4
MMP24OS
MMP24-AS1-EDEM2
CRTC2
SQSTM1
PMM1
SIX5
TTYH2
H3-2
TCIRG1
ABCA7
LRPPRC
LRP6
CASP6
YAP1
AQP11
MTFR2
BCAR3
EIF4A1
LPCAT3
RILP
NAPRT
FBXW5
USP3
NME3
CCDC97
LRP2BP
ANKRD37
DNAJC4
NEIL1
LIFR
TLCD1
SGK1
PCMTD2
PLPP5
SEMA4B
VPS4A
HDAC7
POLR2H
GET4
ANAPC4
FBXO31
MAP1LC3B
NFIB
CYTH1
MTCL1
RASD1
FBXL14
ZNF217
FAM83E
FNBP1
NDUFS3
KBTBD4
HOXA5
CDC6
UNC13D
LBR
DCAKD
TSFM
C16orf71
ANKS3
PHF14
DCTN6
APTX
NARF
MRGBP
GABARAPL1
ZFP64
MACIR
ETV4
TAF9B
RNF225
SRA1
MROH6
BCAP29
RABGEF1
SORT1
ATP6V0B
RPRML
GRK6
EHBP1L1
FUT8
TAF4
STK19
DXO
ANKRD12
FAM199X
KPNB1
TAF2
TMEM132A
TRIM3
GABARAP
JOSD2
LDHA
TUBGCP6
AGAP11
CFD
CSNK1G1
FASTK
AGBL2
HYKK
INPPL1
SPRY1
FOSB
STXBP3
RABGAP1
CLIC3
ADGRF3
TTLL3
INO80D
CCDC169-SOHLH2
CCDC169
SRCAP
LOC730183
MIF4GD
SLC35A2
OTUD5
NFATC3
C1QTNF6
TPCN1
IQCD
RCE1
PDF
PHIP
CHEK1
ARPC3
PPP1R15B
WDR62
THAP8
ZBTB25
ZBTB1
RHOQ
ATP6V1E2
RPS15
ABHD10
SINHCAF
TUBA1B
SELENOO
XXYLT1
SRRT
ADAMTS10
LRRC73
SMAGP
TTC3
PIGP
SPPL2B
LSM7
TMEM151A
CRACR2B
NAA35
MFN1
ARSB
EXOSC6
RBM4
NUDT16L1
TFAP4
MRM1
BRWD1
WDR27
C6orf120
CCDC130
IAH1
FNDC3B
C7orf26
C7orf25
GOLPH3
RARS1
TXNDC5
PCGF1
ELOVL6
HNRNPF
ZNF451
SENP3
DDX56
POLR2J3
JPT2
RRAGC
MPHOSPH8
DNM2
ZNF865
PIDD1
TBC1D22A
ZSCAN31
RPL7
RDH10
SFXN4
COA6
ARRB1
MFSD1
SPIDR
STMP1
ZNF584
MICAL3
LSM8
PAK2
WNK1
SBDS
RHBDL1
POM121C
NR3C1
SEC14L2
DBP
ABCF3
MADD
COMMD5
SNTB2
GTF3C4
DDX31
SSH3
FARP2
LRRC46
SPTBN5
C8orf82
SPIRE2
C6orf62
CISD3
MFSD3
CDC42EP2
GPX8
PIK3CA
PPIA
FOS
FBXO22
PITX3
NPRL3
ATF3
UPF3A
CSRNP2
CYB561D1
POMT2
GSTZ1
DECR2
ZC3H6
TSSC4
NFE2L2
DOCK9
MCCD1
CELSR3
SLC25A17
POLR2C
EBAG9
TFPT
PRPF31
ZNF335
MAPKAPK5
TSN
RABL2B
RABL2A
SRD5A1
NSUN2
POLR3F
DZANK1
CACTIN
NVL
DYNC1LI2
NUP85
ICE1
VDAC2
IPO13
RWDD1
NME6
OAZ3
REXO1
MRPS7
GGA3
C19orf48
PSMD12
LYRM4
FARS2
SLC35B1
NCLN
SUCLG1
ZNF576
IRGQ
SUDS3
HSPA9
CAPRIN1
EFTUD2
CCDC103
UBE2I
RBBP5
PSMG2
GOSR2
CEP76
UPF2
POLR2E
EXOSC5
BCKDHA
DCTN1
VARS1
BLCAP
MRPL11
MRPS5
NUP205
HADHB
HADHA
STAM2
CDC73
ACTR10
COX7A2L
PSMD1
TSNAX
PAK1IP1
C6orf52
SEC61B
COMMD1
CCT4
STAM
SART3
ISCU
SKP1
PI4KB
RABGGTB
IDI1
SUPV3L1
USP1
PDAP1
BUD31
PES1
NDUFA4
FAM174C
ZRANB2
FARSB
ATP5MG
KMT2A
RPL21
PTGES2
TAF9
RAD17
AK6
TM9SF1
SELENOF
HS2ST1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
EIF4ENIF1
EIF2S3
PNO1
PDHX
APIP
DDX39B
VPS9D1
MRPL24
NDUFB10
AXDND1
NECAB3
GADD45GIP1
PCBD2
SEC31A
RPS27A
CLHC1
ANAPC7
MAN2C1
GOLGA5
BAG6
APOM
RCOR3
TBCK
AIMP1
RXYLT1
TMED1
MRPL38
MRTO4
EMC1
SMC2
ECI1
YJU2
RPS23
ATP6AP1L
H3-3A
TTC8
PIN4
GLRX2
DPH6
ULK3
NDUFA10
RPL35A
IQCG
USP21
BICRA
FAM104A
C17orf80
GPS2
RBKS
BABAM2
DENR
TAOK2
TSC1
GFI1B
CNPY2
PABPN1
MEMO1
ENAH
GAGE2A
DENND4B
SLC12A6
CDK12
PPFIA4
AP3M1
ADNP
RPN1
PACS1
TMPPE
GLB1
PROSER1
NHLRC3
LRRC37A3
RPS12
SLC25A42
ROGDI
NUDT4B
NUDT4
TIGD3
H2BU1
NOL7
ANKLE2
OTUD7B
PAF1
MED29
MAP3K12
TBC1D13
ATXN7L2
DPY19L4
SF3B3
COG4
TARS3
EIF2D
HSPA1B
UFM1
NAXE
DRAP1
C11orf68
MORC3
GPX1
FBXO4
ZNF341
ZNF398
CMTR1
RBM39
DNAJC21
XPNPEP3
ST13
ZNHIT2
RICTOR
H2AW
POLDIP3
CUL9
SOD2
CEMP1
ST3GAL3
DLG4
ACADVL
TP53BP2
CTNNB1
MT2A
EGLN1
DGKZ
HYI
C17orf75
NUMBL
CLK3
MEPCE
PAXBP1
DERA
RASA4B
RUVBL1
GNE
PURA
MORF4L1
ADARB1
PPP3CB
TXLNA
RNF166
CTU2
FAM156B
ALKBH5
RRM2
ASXL1
GDI1
HNRNPU
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
NFAT5
STRIP1
CCAR2
NDUFS7
LUC7L2
ZNF76
PRRC2B
ANKRD54
RFX1
KLF12
UFSP1
CHAF1B
KIAA2026
NDUFB2
TRAP1
CAMK2N2
PMF1-BGLAP
PMF1
COMT
CACFD1
RUFY2
DIDO1
DESI2
PCDH9
B4GALT7
FBXL3
ZMIZ2
RAB4A
KMT2D
ATAD2
MTF2
ZNF862
ZNF48
SMG5
FAM118A
POMT1
GBA
PPP1R37
NOXA1
EEFSEC
PCBP2
SMN2
SMN1
TMEM267
ZNF383
PRDX1
RABIF
PRSS27
PDE4DIP
IBA57
TSPAN10
NPLOC4
TRIM65
NOP2
KAT8
TUT1
SLC39A13
ATXN2L
RIPK1
RPS29
LRR1
SMYD2
TMEM134
POGZ
MTHFS
JAK1
AK1
THAP3
GORAB
PPP1CC
CALM1
SIPA1
NBPF1
AKT3
FAM219B
BNIP3
EDEM1
KAT5
ZNF251
UNC119
KAT6A
DNAJB12
ZCWPW1
HIPK1
TULP3
MCOLN1
AMZ2
SEC61A2
ATAD3A
ZFAND6
MFSD14A
LMBR1
KANSL1
ERCC6L2
DIAPH1
TNKS1BP1
COX19
PATJ
ACADM
RPL37
IL10RB
GFER
MRI1