ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5441334 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX10448664: HeLa

◢ SRX10448665: HeLa

◢ SRX10448666: HeLa

◢ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◣ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

ZNF335
RABL2A
MAPKAPK5
SRD5A1
NSUN2
NVL
RABL2B
RWDD1
TSN
MRPS7
GGA3
DYNC1LI2
ICE1
SUDS3
NUP85
GOLM2
CAPRIN1
REXO1
NCLN
VTI1B
H4C14
CACTIN
H4C15
RBBP5
PSMD12
C19orf48
VDAC2
H3C15
H3C14
H4C12
OAZ3
GCN1
IPO13
SEC61B
VEZF1
ZC3H10
EFTUD2
CCDC103
POLR3F
DZANK1
RIT1
EXOSC5
BCKDHA
HSPA9
UPF2
SNAPC5
VARS1
NDUFA4
NME6
MRPL24
SKP1
PES1
EDC4
MTRNR2L8
COX7A2L
PI4KB
H1-2
HADHB
HADHA
UBE2I
H4C3
LYRM4
FARS2
C6orf226
EPN1
H1-4
H2BC5
ZRANB2
POLG2
SECISBP2
ZNF576
IRGQ
SUCLG1
ACTR10
SLC35B1
CDK12
DDX39B
BLCAP
AXDND1
H4C11
MRPS5
GRAMD2A
TLCD1
MRPL11
COX20
AMDHD2
PSMD1
STAM
CDC73
POLR2E
NAT10
BAG6
APOM
CD68
COMMD1
CCT4
DCTN1
TTC8
SUMF2
GOSR2
SNX16
USP1
MAD1L1
EIF4ENIF1
NRAS
DHRS11
ATP5F1E
CUL7
AKAP8
MTRNR2L2
H2BC4
H2AC6
C18orf32
B3GALT4
BICRA
PAK1IP1
C6orf52
WDR90
TSNAX
NUP205
RPN1
PSMG2
CEP76
RABGGTB
SUPV3L1
PCBP1
ANAPC7
SPATC1L
DAPK3
FLOT1
PDAP1
BUD31
ATAT1
INPP5E
DNAJC21
KRBA2
H3C2
H2AC19
H2AC18
SELENOF
HS2ST1
FAM104A
C17orf80
STAM2
TAF9
RAD17
AK6
FARSB
BAZ2A
GPAA1
VPS28
SART3
ISCU
H4C8
ATP5MG
H2BC21
H2AC20
H2AC21
MSH4
FAM131A
EIF2S3
C19orf53
GADD45GIP1
SLC50A1
PAXBP1
RPL21
RNF166
CTU2
ARF3
RAD23A
ADK
AP3M1
WDR74
NPM3
TBCK
AIMP1
PNO1
TIMM13
DNAJC9
ANKFY1
MAZ
C5orf15
TBK1
CCDC97
HAX1
ERCC6L2
HMCES
MAML1
CDH24
RRP36
RBM39
ECI1
DENND4B
TM9SF1
SYNRG
MAPK8IP3
COX18
H3C13
H2BC18
H1-5
DNLZ
DVL2
SCRIB
SRSF11
MLX
TUSC2
SLC35E3
CHMP2A
CCDC200
PGK1
SYCE2
H2BC11
H2AC11
DNAJB14
PHF1
DHPS
ZNF34
ARFGAP2
H4-16
DALRD3
PRRT2
H2BC12
H2AC12
H4C2
ABTB1
JMJD7-PLA2G4B
JMJD7
ZNF580
POLR2J3
PRKAG1
GGA2
SLC38A2
C17orf49
MYG1
CXorf38
DDAH2
SCAMP3
SIRT7
PRKRIP1
KMT5B
IDI1
DPH7
JMJD8
NADSYN1
PYGO2
LOC101928120
MRPL40
HIRA
GPN2
ZNF653
PDE4A
ZBTB45
FAM228B
MRPL53
SF3B6
POMZP3
CDK11B
CDK11A
FAM174C
HSD17B8
CCDC34
SNAP47
EPN2
TMEM230
KMT2A
E2F3
FLOT2
PTGES2
SH3BGRL3
DONSON
TMEM132A
MMP24OS
MMP24-AS1-EDEM2
GET4
FUT11
ZFP36L1
ZNF446
NDST2
H3C7
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
MOV10
PSMG1
ZNF276
H4C5
H2BC17
H2AC17
CCDC24
H3C4
C5orf24
NAT14
TOM1
C6orf47
CCDC107
BRWD1
GTF2A2
NANOS1
SLC25A10
PDHX
APIP
HMGN2
VPS9D1
NOLC1
NDUFB10
IKBKG
G6PD
H4C1
H3C1
H2BC7
H2AC7
RGL2
DYRK1B
NECAB3
CAPNS1
H2BC8
H2AC8
TRIM37
STAG1
ZFX
CYRIB
KIF2C
VWA7
WBP1
PCBD2
CDK16
NXF1
GANAB
CISD3
SEC31A
SCFD1
MDP1
EXOSC6
VARS2
TAF10
PIP4K2B
RPS27A
CLHC1
PNMA1
THOC6
HCFC1R1
PHLDA1
ZNF513
CCDC138
PDCD2L
GMPPB
MAN2C1
GOLGA5
SIX5
PCBP4
SURF6
SELENOH
WDR6
RCOR3
CD320
POLD1
RCE1
RXYLT1
TMED1
GSTO2
FAM83E
MRPL38
XRN1
MRPL28
MRTO4
EMC1
RPS15A
SPOUT1
SMC2
KLHL11
HDAC10
H2BC15
H2AC15
LLGL2
H2BC13
H2AC13
CCDC85B
BAG2
UBTF
SNX14
STYX
NME3
MAPKBP1
PIP5KL1
SP3
UPF3A
YJU2
FDX2
IMPDH2
RPS23
ATP6AP1L
ORAI3
H3-3A
TEDC2
FADS2
C7orf26
H2AC4
PIN4
RHOT2
PWP2
LOC102724159
LAMP1
H3C10
INPP5K
SCO2
CELF1
TMEM179B
GLRX2
ELK1
MATR3
DPH6
PRAF2
ARL6IP4
TTC33
MST1
GATD3B
GATD3A
FNBP1
ROPN1L
ULK3
NDUFA10
ANTKMT
SRSF4
LMNB1
RBM4
RILP
SRRT
CTNNAL1
RPL35A
IQCG
USP21
TOB2
GTF3C4
DDX31
CSKMT
C11orf98
NDUFS3
MTA2
KBTBD4
THOC5
NAPRT
STUB1
ZNF35
LARP1
RABGAP1
LRRC24
VPS4A
CRTC2
GPS2
ICA1L
RBKS
BABAM2
AGO3
DENR
ZNF581
PIM2
ZBTB12
KIF27
ABCB6
ANAPC4
BCAP29
TAOK2
TSC1
GFI1B
CENPA
URGCP
POLR2C
ZNF865
DECR2
CNPY2
TRIM41
PABPN1
H4C9
MEMO1
URGCP-MRPS24
RPL7
RDH10
ABCF3
CALM2
ENAH
GAGE2A
SLC12A6
IGF1R
EHBP1L1
C16orf46
PPFIA4
RNF225
SRCAP
LOC730183
LRP6
ADNP
POM121C
PACS1
ATXN2
MYL6
TMPPE
GLB1
PROSER1
NHLRC3
PRMT3
LRRC37A3
WDR24
CASP6
SFT2D3
IRF2BP2
RPS12
GTF2IRD2B
GTF2IRD2
SLC25A42
TCTEX1D2
SEC14L1
PATZ1
ROGDI
TLL2
NUDT4B
NUDT4
CRK
TIGD3
CSNK1G1
CSRNP2
CRELD1
PLPP5
RABGEF1
SAMD1
TUBGCP6
C19orf71
MLXIP
H2BU1
WDR27
C6orf120
SELENOO
EIF4A1
ADAT1
NOL7
CS
ANKLE2
MVB12A
GINS2
OTUD7B
LRP2BP
ANKRD37
PAF1
MED29
TXN2
TTLL3
TLCD2
MAP3K12
CELSR3
TBC1D13
PNRC1
ATXN7L2
LBR
DPY19L4
SF3B3
COG4
TARS3
EIF2D
HSPA1B
UFM1
TTYH2
TRIM45
NUDT17
PDF
NAXE
MTMR10
DRAP1
C11orf68
STMP1
MORC3
MFSD3
IFRD2
GPX1
FBXO31
FBXO4
ZNF341
ACTN4
ROMO1
ZNF398
CLN8
CMTR1
MAP1LC3B
XPNPEP3
ST13
ZNHIT2
NPRL3
MRPL12
SETD5
NUDT16L1
APTX
RICTOR
H2AW
C8orf37
CCDC130
POLDIP3
CUL9
YY1
SOD2
LONP1
CATSPERD
CEMP1
ZBTB2
ST3GAL3
DLG4
C8orf82
ACADVL
PHIP
C7orf25
TP53BP2
GPR137
MADD
CTNNB1
MT2A
EGLN1
DGKZ
HYI
METTL8
DCAF17
C17orf75
SLC25A17
TRIM3
SRA1
NUMBL
IAH1
SFXN4
CLK3
HNRNPF
MEPCE
OVCA2
MIF4GD
DERA
WDR97
ANKRD12
RASA4B
YAP1
RUVBL1
GNE
PURA
MORF4L1
TLE3
JPT2
ADARB1
TFAP4
PPP3CB
PIDD1
ZNF584
HAGHL
TXLNA
FAM156B
ALKBH5
RRM2
ASXL1
GDI1
MRM1
HNRNPU
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
DNAJB4
NFAT5
ADAMTS10
TAPBP
FIGN
DCAKD
TSFM
STRIP1
MCCD1
CCAR2
NDUFS7
POLB
PHF10
LUC7L2
GABARAP
ZNF76
ISY1-RAB43
ISY1
PRRC2B
CEP192
ANKRD54
ACVR2B
RFX1
KLF12
ATP6V0B
UFSP1
MROH6
CHAF1B
KIAA2026
NDUFB2
CYC1
TRAP1
CAMK2N2
PMF1-BGLAP
PMF1
COMT
CACFD1
RUFY2
DIDO1
FAM199X
DESI2
PCDH9
PRKDC
MCM4
C12orf57
B4GALT7
FBXL3
ZMIZ2
QSER1
RAB4A
KMT2D
ATAD2
RAB23
KLC2
RAB1B
MTF2
PKM
ZNF862
ZNF48
DNAJC4
COA6
SMG5
FAM118A
POMT1
GBA
PPP1R37
NOXA1
EEFSEC
SQSTM1
PCBP2
SMN2
SMN1
TMEM267
ZNF383
N4BP2
PRDX1
CYB561D1
RABIF
TFPT
PRSS27
PRPF31
PDE4DIP
IBA57
JADE2
TSPAN10
NPLOC4
LRRC73
TRIM65
NOP2
KAT8
TUT1
SLC39A13
ATXN2L
RIPK1
RPS29
LRR1
C1QBP
SMYD2
TMEM134
RSRC1
POGZ
MTHFS
JAK1
C1orf56
AK1
THAP3
RRAGC
GORAB
PPP1CC
CALM1
CDKN2A
CCDC78
SIPA1
NBPF1
AKT3
FAM219B
BNIP3
ZNF451
FANCC
RCC2
EDEM1
KAT5
AQP11
CHEK1
ZNF251
PANK1
UNC119
KAT6A
DNAJB12
ZCWPW1
KPNB1
NFATC3
HIPK1
TULP3
MCOLN1
AMZ2
SENP3
C16orf71
ANKS3
SEC61A2
ATAD3A
WBP1L
SSH3
ZFAND6
MFSD14A
LMBR1
KANSL1
HOXA5
DIAPH1
TNKS1BP1
COX19
PATJ
ACADM
NEIL1
RPL37
MTIF3
IL10RB
GFER
PAK2
TAF2
MRI1
FBXW4
FAM156A
MTRF1L
NCOA2
SSX2IP
MYNN
ABHD10
POP5
MKRN2
ATPAF1
ANP32B
FASTK
FARP2
FAM117B
ETV6
TMEM150A
BUD13
SCAI
NBPF15
CPSF1
CLIC3
ARSG
KDM3B
DDX56
SGF29
SF1
ACOX3
UBA2
CHD8
ACBD6
HMGN1
NCBP3
CHD1L
TPTEP2-CSNK1E
LATS1
ARHGEF12
SUPT4H1
WASHC2C
SEMA4B
DSTYK
CCDC88A
C8orf76
B3GAT3
SLC6A9
PRR7
TRAF4
NOTCH2
NUB1
ECHS1
ERLIN1
SORT1
ARHGEF1
ZFP64
CNP
TNS2
AKAP1
ABL2
SPCS1
GLT8D1
POLR3D
GOLGA1
DDX59
PDCD6
NCOA7
JMJD4
TONSL
LAMTOR3
PYCR2
FAM207A
E4F1
AGK
PHF8
KMT2C
WDR37
TFAM
B3GALNT2
ABCA7
PRKACB
FBXW5
ARPC3
H3C8
RAB5B
KLF6
ING1
CDC6
ACBD3
STC2
TOMM20
GTPBP3
ANO8
ZC3H6
EHMT1
VCP
SCAP
H2AX
NAA35
TRAPPC8
THEM4
PDCD2
ACTR8
SETD6
ROM1
NARF
EML3
ZSWIM8
FAM76B
CUL1
CEP57
RNF220
LIN9
SEMA4C
OSGEP
HNRNPUL1
APEX1
ADIPOR1
TM2D3
SMARCD1
PARP1
MNT
IMPA1
CYBA
CIRBP
PRKAB2
PMM1
ANKH
TSPAN31
TCF3
RASD1
NFIB
BOLA3
PPP1CA
NR1D2
NKIRAS1
LRRC40
ZBTB10
LIFR
PANK3
NAA80
MTX1
HYAL3
STX18
PPP1R15B
ZZZ3
UBE2Z
STIMATE-MUSTN1
STIMATE
BRAF
C2
RSAD1
MED26
MARCHF7
PRRC2A
SPTAN1
MARCHF6
FAM20B
BMI1
ARSB
STK36
RNF25
ARHGEF11
SLC24A1
ATXN7
TBCD
SKIDA1
MTARC1
WDR62
THAP8
SLC25A22
ZNF148
PRR12
MCUR1
IREB2
SMTN
HMGA1
TMEM223
GAA
AGAP11